RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 TIGITQ495A1 244 aa14.5□□□□□ -0.09
SS18-208ENST00000577751 SLC16A13Q7RTY0 426 aa14.5□□□□□ -0.09
SS18-208ENST00000577751 NPIPB3Q92617 1050 aa14.5□□□□□ -0.09
SS18-208ENST00000577751 NEURL2Q9BR09 285 aa14.5□□□□□ -0.09
SS18-208ENST00000577751 SEC22CQ9BRL7 303 aa14.5□□□□□ -0.09
SS18-208ENST00000577751 GINS3Q9BRX5 216 aa14.5□□□□□ -0.09
SS18-208ENST00000577751 RHPN1-AS1Q9BWJ2 59 aa14.5□□□□□ -0.09
SS18-208ENST00000577751 DNAH9Q9NYC9 4486 aa14.5□□□□□ -0.09
SS18-208ENST00000577751 TSPAN4O14817 238 aa14.49□□□□□ -0.09
SS18-208ENST00000577751 SCAF4O95104 1147 aaKnown RBP14.49□□□□□ -0.09
SS18-208ENST00000577751 NKX2-1P43699 371 aaPredicted RBP14.49□□□□□ -0.09
SS18-208ENST00000577751 CD81P60033 236 aa14.49□□□□□ -0.09
SS18-208ENST00000577751 YPEL3P61236 119 aaPredicted RBP14.49□□□□□ -0.09
SS18-208ENST00000577751 POLR2GP62487 172 aaKnown RBP eCLIP14.49□□□□□ -0.09
SS18-208ENST00000577751 IAH1Q2TAA2 248 aaPredicted RBP14.49□□□□□ -0.09
SS18-208ENST00000577751 RBPMS2Q6ZRY4 209 aaKnown RBP14.49□□□□□ -0.09
SS18-208ENST00000577751 COL7A1Q02388 2944 aa14.49□□□□□ -0.09
SS18-208ENST00000577751 IL5P05113 134 aa14.48□□□□□ -0.09
SS18-208ENST00000577751 OR10J1P30954 320 aa14.48□□□□□ -0.09
SS18-208ENST00000577751 RAB11AP62491 216 aa14.48□□□□□ -0.09
SS18-208ENST00000577751 RPP30P78346 268 aaKnown RBP14.48□□□□□ -0.09
SS18-208ENST00000577751 LAMTOR1Q6IAA8 161 aa14.48□□□□□ -0.09
SS18-208ENST00000577751 SBSPONQ8IVN8 264 aa14.48□□□□□ -0.09
SS18-208ENST00000577751 ZBTB8BQ8NAP8 495 aaPredicted RBP14.48□□□□□ -0.09
SS18-208ENST00000577751 ACY3Q96HD9 319 aa14.48□□□□□ -0.09
SS18-208ENST00000577751 RNF2Q99496 336 aa14.48□□□□□ -0.09
SS18-208ENST00000577751 SPAG8Q99932 426 aaPredicted RBP14.48□□□□□ -0.09
SS18-208ENST00000577751 VSIRQ9H7M9 311 aa14.48□□□□□ -0.09
SS18-208ENST00000577751 PRSS46E5RG02 174 aa14.47□□□□□ -0.09
SS18-208ENST00000577751 GAMTQ14353 236 aa14.47□□□□□ -0.09
SS18-208ENST00000577751 FAM90A2PQ658T7 463 aa14.47□□□□□ -0.09
SS18-208ENST00000577751 NRARPQ7Z6K4 114 aa14.47□□□□□ -0.09
SS18-208ENST00000577751 C12orf45Q8N5I9 185 aaPredicted RBP14.47□□□□□ -0.09
SS18-208ENST00000577751 ENKURQ8TC29 256 aa14.47□□□□□ -0.09
SS18-208ENST00000577751 ASCL2Q99929 193 aa14.47□□□□□ -0.09
SS18-208ENST00000577751 IGHV3-49A0A0A0MS15 119 aa14.46□□□□□ -0.09
SS18-208ENST00000577751 APOHP02749 345 aaPredicted RBP14.46□□□□□ -0.09
SS18-208ENST00000577751 PAX9P55771 341 aa14.46□□□□□ -0.09
SS18-208ENST00000577751 SPANXN5Q5MJ07 72 aa14.46□□□□□ -0.09
SS18-208ENST00000577751 OR11H12B2RN74 326 aa14.45□□□□□ -0.1
SS18-208ENST00000577751 CCSO14618 274 aa14.45□□□□□ -0.1
SS18-208ENST00000577751 NPPCP23582 126 aa14.45□□□□□ -0.1
SS18-208ENST00000577751 CRYBB3P26998 211 aa14.45□□□□□ -0.1
SS18-208ENST00000577751 LINC00322Q6ZN03 302 aaPredicted RBP14.45□□□□□ -0.1
SS18-208ENST00000577751 Q8WTZ3 238 aa14.45□□□□□ -0.1
SS18-208ENST00000577751 SLC35E1Q96K37 410 aa14.45□□□□□ -0.1
SS18-208ENST00000577751 SMIM8Q96KF7 97 aa14.45□□□□□ -0.1
SS18-208ENST00000577751 GSKIPQ9P0R6 139 aa14.45□□□□□ -0.1
SS18-208ENST00000577751 STRAPQ9Y3F4 350 aaKnown RBP14.45□□□□□ -0.1
SS18-208ENST00000577751 IGKV1D-37A0A075B6S9 117 aa14.44□□□□□ -0.1
SS18-208ENST00000577751 IGHV3OR16-13A0A075B7E8 117 aa14.44□□□□□ -0.1
SS18-208ENST00000577751 IGHV3-74A0A0B4J1X5 117 aa14.44□□□□□ -0.1
SS18-208ENST00000577751 H3BP45 60 aa14.44□□□□□ -0.1
SS18-208ENST00000577751 TOMM40O96008 361 aa14.44□□□□□ -0.1
SS18-208ENST00000577751 LILRB2Q8N423 598 aa14.44□□□□□ -0.1
SS18-208ENST00000577751 DEFB125Q8N687 156 aa14.44□□□□□ -0.1
SS18-208ENST00000577751 ST8SIA2Q92186 375 aa14.44□□□□□ -0.1
SS18-208ENST00000577751 METTL26Q96S19 204 aa14.44□□□□□ -0.1
SS18-208ENST00000577751 WFDC10AQ9H1F0 79 aa14.44□□□□□ -0.1
SS18-208ENST00000577751 TUBA4BQ9H853 241 aa14.44□□□□□ -0.1
SS18-208ENST00000577751 PSENENQ9NZ42 101 aa14.44□□□□□ -0.1
SS18-208ENST00000577751 PAIP2BQ9ULR5 123 aaKnown RBP14.44□□□□□ -0.1
SS18-208ENST00000577751 PMS2P5A8MQ11 134 aa14.43□□□□□ -0.1
SS18-208ENST00000577751 SSSCA1O60232 199 aa14.43□□□□□ -0.1
SS18-208ENST00000577751 MBPP02686 304 aaPredicted RBP14.43□□□□□ -0.1
SS18-208ENST00000577751 CD5P06127 495 aa14.43□□□□□ -0.1
SS18-208ENST00000577751 RD3LP0DJH9 198 aa14.43□□□□□ -0.1
SS18-208ENST00000577751 BMI1P35226 326 aa14.43□□□□□ -0.1
SS18-208ENST00000577751 TAS2R30P59541 319 aa14.43□□□□□ -0.1
SS18-208ENST00000577751 DEFA1P59665 94 aa14.43□□□□□ -0.1
SS18-208ENST00000577751 DEFA3P59666 94 aa14.43□□□□□ -0.1
SS18-208ENST00000577751 RAB40CQ96S21 281 aa14.43□□□□□ -0.1
SS18-208ENST00000577751 MARVELD1Q9BSK0 173 aa14.43□□□□□ -0.1
SS18-208ENST00000577751 RCL1Q9Y2P8 373 aaKnown RBP14.43□□□□□ -0.1
SS18-208ENST00000577751 U3KQE9 123 aa14.43□□□□□ -0.1
SS18-208ENST00000577751 SCGB1D2O95969 90 aa14.42□□□□□ -0.1
SS18-208ENST00000577751 PSG1P11464 419 aa14.42□□□□□ -0.1
SS18-208ENST00000577751 TMEM14EPQ6UXP3 125 aa14.42□□□□□ -0.1
SS18-208ENST00000577751 THAP8Q8NA92 274 aa14.42□□□□□ -0.1
SS18-208ENST00000577751 C2orf50Q96LR7 162 aa14.42□□□□□ -0.1
SS18-208ENST00000577751 TMEM231Q9H6L2 316 aa14.42□□□□□ -0.1
SS18-208ENST00000577751 IGKV1OR2-108A0A075B7D4 117 aa14.41□□□□□ -0.1
SS18-208ENST00000577751 A0A1W2PS18 150 aa14.41□□□□□ -0.1
SS18-208ENST00000577751 OR4C46A6NHA9 309 aa14.41□□□□□ -0.1
SS18-208ENST00000577751 ZFP92A6NM28 416 aa14.41□□□□□ -0.1
SS18-208ENST00000577751 SNRPGP15A8MWD9 76 aa14.41□□□□□ -0.1
SS18-208ENST00000577751 INMT-MINDY4F8WBC2 141 aa14.41□□□□□ -0.1
SS18-208ENST00000577751 IL15RAQ13261 267 aa14.41□□□□□ -0.1
SS18-208ENST00000577751 USF2Q15853 346 aaPredicted RBP14.41□□□□□ -0.1
SS18-208ENST00000577751 TCF24Q7RTU0 167 aa14.41□□□□□ -0.1
SS18-208ENST00000577751 TRGV9Q99603 122 aa14.41□□□□□ -0.1
SS18-208ENST00000577751 FAM110AQ9BQ89 295 aa14.41□□□□□ -0.1
SS18-208ENST00000577751 TM2D3Q9BRN9 247 aa14.41□□□□□ -0.1
SS18-208ENST00000577751 GPN1Q9HCN4 374 aaPredicted RBP14.41□□□□□ -0.1
SS18-208ENST00000577751 IGHV3-66A0A0C4DH42 116 aa14.4□□□□□ -0.1
SS18-208ENST00000577751 C7orf66A4D0T2 115 aa14.4□□□□□ -0.1
SS18-208ENST00000577751 RBMY1BA6NDE4 496 aaKnown RBP14.4□□□□□ -0.1
SS18-208ENST00000577751 C5orf51A6NDU8 294 aa14.4□□□□□ -0.1
SS18-208ENST00000577751 RBMY1EA6NEQ0 496 aaKnown RBP14.4□□□□□ -0.1
SS18-208ENST00000577751 FAM25EA8MYX2 175 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms