RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 SYNJ2BPP57105 145 aa6.55□□□□□ -1.36
NUP88-211ENST00000575976 RAP2BP61225 183 aa6.55□□□□□ -1.36
NUP88-211ENST00000575976 DLK1P80370 383 aa6.55□□□□□ -1.36
NUP88-211ENST00000575976 TIGITQ495A1 244 aa6.55□□□□□ -1.36
NUP88-211ENST00000575976 TREML4Q6UXN2 200 aa6.55□□□□□ -1.36
NUP88-211ENST00000575976 ACOT7LQ6ZUV0 252 aa6.55□□□□□ -1.36
NUP88-211ENST00000575976 GPHB5Q86YW7 130 aa6.55□□□□□ -1.36
NUP88-211ENST00000575976 WFDC9Q8NEX5 89 aa6.55□□□□□ -1.36
NUP88-211ENST00000575976 ASB13Q8WXK3 278 aa6.55□□□□□ -1.36
NUP88-211ENST00000575976 IGKV1D-37A0A075B6S9 117 aa6.54□□□□□ -1.36
NUP88-211ENST00000575976 TRAV30A0A087WSZ9 112 aa6.54□□□□□ -1.36
NUP88-211ENST00000575976 A0A1B0GVG6 124 aa6.54□□□□□ -1.36
NUP88-211ENST00000575976 G3V3Q6 166 aa6.54□□□□□ -1.36
NUP88-211ENST00000575976 SMLR1H3BR10 107 aa6.54□□□□□ -1.36
NUP88-211ENST00000575976 IGKV1-17P01599 117 aa6.54□□□□□ -1.36
NUP88-211ENST00000575976 IGLL1P15814 213 aa6.54□□□□□ -1.36
NUP88-211ENST00000575976 OR10J1P30954 320 aa6.54□□□□□ -1.36
NUP88-211ENST00000575976 SULT1A1P50225 295 aa6.54□□□□□ -1.36
NUP88-211ENST00000575976 EWSR1Q01844 656 aaKnown RBP eCLIP6.54□□□□□ -1.36
NUP88-211ENST00000575976 NHLH2Q02577 135 aa6.54□□□□□ -1.36
NUP88-211ENST00000575976 FGL1Q08830 312 aa6.54□□□□□ -1.36
NUP88-211ENST00000575976 SLC38A11Q08AI6 406 aa6.54□□□□□ -1.36
NUP88-211ENST00000575976 FAM106AQ4KMX7 169 aa6.54□□□□□ -1.36
NUP88-211ENST00000575976 UNQ9165/PRO28630Q6UXU0 137 aa6.54□□□□□ -1.36
NUP88-211ENST00000575976 REC114Q7Z4M0 266 aa6.54□□□□□ -1.36
NUP88-211ENST00000575976 C1QL4Q86Z23 238 aa6.54□□□□□ -1.36
NUP88-211ENST00000575976 TMEM217Q8N7C4 229 aa6.54□□□□□ -1.36
NUP88-211ENST00000575976 OR1S2Q8NGQ3 325 aa6.54□□□□□ -1.36
NUP88-211ENST00000575976 OR2T35Q8NGX2 323 aa6.54□□□□□ -1.36
NUP88-211ENST00000575976 THAP6Q8TBB0 222 aa6.54□□□□□ -1.36
NUP88-211ENST00000575976 SLC25A31Q9H0C2 315 aa6.54□□□□□ -1.36
NUP88-211ENST00000575976 IGKV1OR2-108A0A075B7D4 117 aa6.53□□□□□ -1.36
NUP88-211ENST00000575976 ZNF320A2RRD8 509 aa6.53□□□□□ -1.36
NUP88-211ENST00000575976 SMCO3A2RU48 225 aa6.53□□□□□ -1.36
NUP88-211ENST00000575976 ZFP92A6NM28 416 aa6.53□□□□□ -1.36
NUP88-211ENST00000575976 FNDC10F2Z333 226 aa6.53□□□□□ -1.36
NUP88-211ENST00000575976 LGALS9O00182 355 aa6.53□□□□□ -1.36
NUP88-211ENST00000575976 NDUFA4O00483 81 aa6.53□□□□□ -1.36
NUP88-211ENST00000575976 EDN2P20800 178 aa6.53□□□□□ -1.36
NUP88-211ENST00000575976 RPL12P30050 165 aaKnown RBP6.53□□□□□ -1.36
NUP88-211ENST00000575976 S100A11P31949 105 aa6.53□□□□□ -1.36
NUP88-211ENST00000575976 AKR1C1Q04828 323 aa6.53□□□□□ -1.36
NUP88-211ENST00000575976 RELQ04864 619 aaPredicted RBP6.53□□□□□ -1.36
NUP88-211ENST00000575976 TOMM20LQ6UXN7 152 aa6.53□□□□□ -1.36
NUP88-211ENST00000575976 IL34Q6ZMJ4 242 aa6.53□□□□□ -1.36
NUP88-211ENST00000575976 ZNF600Q6ZNG1 722 aa6.53□□□□□ -1.36
NUP88-211ENST00000575976 TMEM144Q7Z5S9 345 aa6.53□□□□□ -1.36
NUP88-211ENST00000575976 STX12Q86Y82 276 aa6.53□□□□□ -1.36
NUP88-211ENST00000575976 THAP8Q8NA92 274 aa6.53□□□□□ -1.36
NUP88-211ENST00000575976 OR9G4Q8NGQ1 327 aa6.53□□□□□ -1.36
NUP88-211ENST00000575976 RCC1LQ96I51 464 aaKnown RBP6.53□□□□□ -1.36
NUP88-211ENST00000575976 GGACTQ9BVM4 153 aa6.53□□□□□ -1.36
NUP88-211ENST00000575976 NPVFQ9HCQ7 196 aa6.53□□□□□ -1.36
NUP88-211ENST00000575976 IGHV3OR16-8A0A075B7F1 116 aa6.52□□□□□ -1.37
NUP88-211ENST00000575976 SEC14L6B5MCN3 397 aa6.52□□□□□ -1.37
NUP88-211ENST00000575976 ZNF207O43670 478 aaKnown RBP6.52□□□□□ -1.37
NUP88-211ENST00000575976 SCGB2A1O75556 95 aa6.52□□□□□ -1.37
NUP88-211ENST00000575976 YIF1AO95070 293 aa6.52□□□□□ -1.37
NUP88-211ENST00000575976 SCAF4O95104 1147 aaKnown RBP6.52□□□□□ -1.37
NUP88-211ENST00000575976 TOMM40O96008 361 aa6.52□□□□□ -1.37
NUP88-211ENST00000575976 CSN3P07498 182 aa6.52□□□□□ -1.37
NUP88-211ENST00000575976 YPEL3P61236 119 aaPredicted RBP6.52□□□□□ -1.37
NUP88-211ENST00000575976 HBG1P69891 147 aa6.52□□□□□ -1.37
NUP88-211ENST00000575976 HBG2P69892 147 aa6.52□□□□□ -1.37
NUP88-211ENST00000575976 ZNF90Q03938 601 aa6.52□□□□□ -1.37
NUP88-211ENST00000575976 BAXQ07812 192 aa6.52□□□□□ -1.37
NUP88-211ENST00000575976 ATP6V1FQ16864 119 aa6.52□□□□□ -1.37
NUP88-211ENST00000575976 TM4SF20Q53R12 229 aa6.52□□□□□ -1.37
NUP88-211ENST00000575976 OXLD1Q5BKU9 147 aa6.52□□□□□ -1.37
NUP88-211ENST00000575976 ADAMTSL5Q6ZMM2 481 aa6.52□□□□□ -1.37
NUP88-211ENST00000575976 LILRB2Q8N423 598 aa6.52□□□□□ -1.37
NUP88-211ENST00000575976 OR5C1Q8NGR4 320 aa6.52□□□□□ -1.37
NUP88-211ENST00000575976 Q8WTZ3 238 aa6.52□□□□□ -1.37
NUP88-211ENST00000575976 TMEM190Q8WZ59 177 aa6.52□□□□□ -1.37
NUP88-211ENST00000575976 ST6GAL2Q96JF0 529 aa6.52□□□□□ -1.37
NUP88-211ENST00000575976 TRGV9Q99603 122 aa6.52□□□□□ -1.37
NUP88-211ENST00000575976 MCRIP2Q9BUT9 160 aaKnown RBP6.52□□□□□ -1.37
NUP88-211ENST00000575976 C20orf24Q9BUV8 137 aa6.52□□□□□ -1.37
NUP88-211ENST00000575976 TMEM147Q9BVK8 224 aa6.52□□□□□ -1.37
NUP88-211ENST00000575976 ZFAND3Q9H8U3 227 aa6.52□□□□□ -1.37
NUP88-211ENST00000575976 PEMTQ9UBM1 199 aa6.52□□□□□ -1.37
NUP88-211ENST00000575976 HSPB11Q9Y547 144 aa6.52□□□□□ -1.37
NUP88-211ENST00000575976 PUS1Q9Y606 427 aaKnown RBP eCLIP6.52□□□□□ -1.37
NUP88-211ENST00000575976 FXYD6-FXYD2A0A087WZ82 144 aa6.51□□□□□ -1.37
NUP88-211ENST00000575976 TMEM213A2RRL7 107 aa6.51□□□□□ -1.37
NUP88-211ENST00000575976 C2orf70A6NJV1 201 aa6.51□□□□□ -1.37
NUP88-211ENST00000575976 A8MWP6 167 aa6.51□□□□□ -1.37
NUP88-211ENST00000575976 K7EMT4 169 aa6.51□□□□□ -1.37
NUP88-211ENST00000575976 RD3LP0DJH9 198 aa6.51□□□□□ -1.37
NUP88-211ENST00000575976 PSG1P11464 419 aa6.51□□□□□ -1.37
NUP88-211ENST00000575976 GATA2P23769 480 aaPredicted RBP6.51□□□□□ -1.37
NUP88-211ENST00000575976 ELLP55199 621 aaPredicted RBP6.51□□□□□ -1.37
NUP88-211ENST00000575976 OR2F1Q13607 317 aa6.51□□□□□ -1.37
NUP88-211ENST00000575976 CLINT1Q14677 625 aa6.51□□□□□ -1.37
NUP88-211ENST00000575976 VWC2Q2TAL6 325 aa6.51□□□□□ -1.37
NUP88-211ENST00000575976 C9orf66Q5T8R8 295 aa6.51□□□□□ -1.37
NUP88-211ENST00000575976 TMEM182Q6ZP80 229 aaPredicted RBP6.51□□□□□ -1.37
NUP88-211ENST00000575976 ZNF546Q86UE3 836 aa6.51□□□□□ -1.37
NUP88-211ENST00000575976 ARPC5LQ9BPX5 153 aa6.51□□□□□ -1.37
NUP88-211ENST00000575976 ELOVL1Q9BW60 279 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms