RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 NPIPB3Q92617 1050 aa11.53□□□□□ -0.56
LITAF-217ENST00000575426 SMIM8Q96KF7 97 aa11.53□□□□□ -0.56
LITAF-217ENST00000575426 MRPL36Q9P0J6 103 aaKnown RBP11.53□□□□□ -0.56
LITAF-217ENST00000575426 TRAV14DV4A0A0A6YYC5 116 aa11.52□□□□□ -0.57
LITAF-217ENST00000575426 H3BP45 60 aa11.52□□□□□ -0.57
LITAF-217ENST00000575426 ZNF207O43670 478 aaKnown RBP11.52□□□□□ -0.57
LITAF-217ENST00000575426 PTTG1O95997 202 aa11.52□□□□□ -0.57
LITAF-217ENST00000575426 C8orf88P0DMB2 117 aa11.52□□□□□ -0.57
LITAF-217ENST00000575426 EDN2P20800 178 aa11.52□□□□□ -0.57
LITAF-217ENST00000575426 TIGITQ495A1 244 aa11.52□□□□□ -0.57
LITAF-217ENST00000575426 CD300EQ496F6 205 aaPredicted RBP11.52□□□□□ -0.57
LITAF-217ENST00000575426 TOMM20LQ6UXN7 152 aa11.52□□□□□ -0.57
LITAF-217ENST00000575426 Q8WTZ3 238 aa11.52□□□□□ -0.57
LITAF-217ENST00000575426 LSM5Q9Y4Y9 91 aaKnown RBP11.52□□□□□ -0.57
LITAF-217ENST00000575426 PUS1Q9Y606 427 aaKnown RBP eCLIP11.52□□□□□ -0.57
LITAF-217ENST00000575426 MBPP02686 304 aaPredicted RBP11.51□□□□□ -0.57
LITAF-217ENST00000575426 PVALBP20472 110 aaPredicted RBP11.51□□□□□ -0.57
LITAF-217ENST00000575426 BMI1P35226 326 aa11.51□□□□□ -0.57
LITAF-217ENST00000575426 TAS2R30P59541 319 aa11.51□□□□□ -0.57
LITAF-217ENST00000575426 GUCA2BQ16661 112 aa11.51□□□□□ -0.57
LITAF-217ENST00000575426 BTNL8Q6UX41 500 aa11.51□□□□□ -0.57
LITAF-217ENST00000575426 RBPMS2Q6ZRY4 209 aaKnown RBP11.51□□□□□ -0.57
LITAF-217ENST00000575426 RCL1Q9Y2P8 373 aaKnown RBP11.51□□□□□ -0.57
LITAF-217ENST00000575426 IZUMO1RA6ND01 250 aa11.5□□□□□ -0.57
LITAF-217ENST00000575426 ZFP92A6NM28 416 aa11.5□□□□□ -0.57
LITAF-217ENST00000575426 GOSR2O14653 212 aa11.5□□□□□ -0.57
LITAF-217ENST00000575426 SSNA1O43805 119 aa11.5□□□□□ -0.57
LITAF-217ENST00000575426 FABP1P07148 127 aa11.5□□□□□ -0.57
LITAF-217ENST00000575426 IGLC1P0CG04 106 aa11.5□□□□□ -0.57
LITAF-217ENST00000575426 YPEL3P61236 119 aaPredicted RBP11.5□□□□□ -0.57
LITAF-217ENST00000575426 GAMTQ14353 236 aa11.5□□□□□ -0.57
LITAF-217ENST00000575426 LAMTOR1Q6IAA8 161 aa11.5□□□□□ -0.57
LITAF-217ENST00000575426 GTSCR1Q86UQ5 136 aa11.5□□□□□ -0.57
LITAF-217ENST00000575426 NARS2Q96I59 477 aaKnown RBP11.5□□□□□ -0.57
LITAF-217ENST00000575426 MLXQ9UH92 298 aa11.5□□□□□ -0.57
LITAF-217ENST00000575426 SMPXQ9UHP9 88 aa11.5□□□□□ -0.57
LITAF-217ENST00000575426 TRAV25A0A0B4J276 109 aa11.49□□□□□ -0.57
LITAF-217ENST00000575426 IGHV7-4-1A0A0J9YVY3 117 aa11.49□□□□□ -0.57
LITAF-217ENST00000575426 K7EPK0 472 aa11.49□□□□□ -0.57
LITAF-217ENST00000575426 TSC22D2O75157 780 aa11.49□□□□□ -0.57
LITAF-217ENST00000575426 IGKV1-17P01599 117 aa11.49□□□□□ -0.57
LITAF-217ENST00000575426 NPPCP23582 126 aa11.49□□□□□ -0.57
LITAF-217ENST00000575426 BCAP31P51572 246 aa11.49□□□□□ -0.57
LITAF-217ENST00000575426 S100A10P60903 97 aa11.49□□□□□ -0.57
LITAF-217ENST00000575426 OR8G2PQ6IF36 304 aa11.49□□□□□ -0.57
LITAF-217ENST00000575426 OR10P1Q8NGE3 313 aa11.49□□□□□ -0.57
LITAF-217ENST00000575426 SELENOKQ9Y6D0 94 aa11.49□□□□□ -0.57
LITAF-217ENST00000575426 SMAD5-AS1Q9Y6J3 95 aa11.49□□□□□ -0.57
LITAF-217ENST00000575426 RD3LP0DJH9 198 aa11.48□□□□□ -0.57
LITAF-217ENST00000575426 PAX9P55771 341 aa11.48□□□□□ -0.57
LITAF-217ENST00000575426 CYCSP99999 105 aaKnown RBP11.48□□□□□ -0.57
LITAF-217ENST00000575426 METTL26Q96S19 204 aa11.48□□□□□ -0.57
LITAF-217ENST00000575426 RHPN1-AS1Q9BWJ2 59 aa11.48□□□□□ -0.57
LITAF-217ENST00000575426 TMEM231Q9H6L2 316 aa11.48□□□□□ -0.57
LITAF-217ENST00000575426 ZFAND3Q9H8U3 227 aa11.48□□□□□ -0.57
LITAF-217ENST00000575426 LSM4Q9Y4Z0 139 aaKnown RBP11.48□□□□□ -0.57
LITAF-217ENST00000575426 IGHV3-49A0A0A0MS15 119 aa11.47□□□□□ -0.57
LITAF-217ENST00000575426 A0A1W2PS18 150 aa11.47□□□□□ -0.57
LITAF-217ENST00000575426 C7orf66A4D0T2 115 aa11.47□□□□□ -0.57
LITAF-217ENST00000575426 ZNF785A8K8V0 405 aa11.47□□□□□ -0.57
LITAF-217ENST00000575426 CHEK1O14757 476 aa11.47□□□□□ -0.57
LITAF-217ENST00000575426 SCAF4O95104 1147 aaKnown RBP11.47□□□□□ -0.57
LITAF-217ENST00000575426 SIX6O95475 246 aa11.47□□□□□ -0.57
LITAF-217ENST00000575426 TOMM40O96008 361 aa11.47□□□□□ -0.57
LITAF-217ENST00000575426 RLN2P04090 185 aa11.47□□□□□ -0.57
LITAF-217ENST00000575426 METTL15P1P0C7V9 234 aa11.47□□□□□ -0.57
LITAF-217ENST00000575426 AKR1C1Q04828 323 aa11.47□□□□□ -0.57
LITAF-217ENST00000575426 TMEM61Q8N0U2 210 aa11.47□□□□□ -0.57
LITAF-217ENST00000575426 WDR89Q96FK6 387 aaPredicted RBP11.47□□□□□ -0.57
LITAF-217ENST00000575426 ZNF414Q96IQ9 312 aa11.47□□□□□ -0.57
LITAF-217ENST00000575426 SMCO3A2RU48 225 aa11.46□□□□□ -0.57
LITAF-217ENST00000575426 IL4P05112 153 aa11.46□□□□□ -0.57
LITAF-217ENST00000575426 CD5P06127 495 aa11.46□□□□□ -0.57
LITAF-217ENST00000575426 RAB32Q13637 225 aa11.46□□□□□ -0.57
LITAF-217ENST00000575426 RGS21Q2M5E4 152 aa11.46□□□□□ -0.57
LITAF-217ENST00000575426 TMEM14EPQ6UXP3 125 aa11.46□□□□□ -0.57
LITAF-217ENST00000575426 TRGV9Q99603 122 aa11.46□□□□□ -0.57
LITAF-217ENST00000575426 NMES1Q9C002 83 aa11.46□□□□□ -0.57
LITAF-217ENST00000575426 MGAT4CQ9UBM8 478 aa11.46□□□□□ -0.57
LITAF-217ENST00000575426 IGHV3OR16-13A0A075B7E8 117 aa11.45□□□□□ -0.58
LITAF-217ENST00000575426 IGHV3-74A0A0B4J1X5 117 aa11.45□□□□□ -0.58
LITAF-217ENST00000575426 PRSS46E5RG02 174 aa11.45□□□□□ -0.58
LITAF-217ENST00000575426 PSG1P11464 419 aa11.45□□□□□ -0.58
LITAF-217ENST00000575426 CAV2P51636 162 aa11.45□□□□□ -0.58
LITAF-217ENST00000575426 CD81P60033 236 aa11.45□□□□□ -0.58
LITAF-217ENST00000575426 DLK1P80370 383 aa11.45□□□□□ -0.58
LITAF-217ENST00000575426 IL15RAQ13261 267 aa11.45□□□□□ -0.58
LITAF-217ENST00000575426 ACOT7LQ6ZUV0 252 aa11.45□□□□□ -0.58
LITAF-217ENST00000575426 OR51G1Q8NGK1 321 aa11.45□□□□□ -0.58
LITAF-217ENST00000575426 GRAMD2BQ96HH9 432 aa11.45□□□□□ -0.58
LITAF-217ENST00000575426 RNF2Q99496 336 aa11.45□□□□□ -0.58
LITAF-217ENST00000575426 SPAG8Q99932 426 aaPredicted RBP11.45□□□□□ -0.58
LITAF-217ENST00000575426 NEURL2Q9BR09 285 aa11.45□□□□□ -0.58
LITAF-217ENST00000575426 PFDN2Q9UHV9 154 aa11.45□□□□□ -0.58
LITAF-217ENST00000575426 PMS2P5A8MQ11 134 aa11.44□□□□□ -0.58
LITAF-217ENST00000575426 TSPAN4O14817 238 aa11.44□□□□□ -0.58
LITAF-217ENST00000575426 HNRNPCP07910 306 aaKnown RBP eCLIP11.44□□□□□ -0.58
LITAF-217ENST00000575426 CRYBB3P26998 211 aa11.44□□□□□ -0.58
LITAF-217ENST00000575426 RRAS2P62070 204 aaPredicted RBP11.44□□□□□ -0.58
LITAF-217ENST00000575426 PAFAH1B2P68402 229 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms