RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 CSMD1Q96PZ7 3565 aa7.87□□□□□ -1.15
CCDC40-212ENST00000574799 NBASA2RRP1 2371 aa7.87□□□□□ -1.15
CCDC40-212ENST00000574799 MED12LQ86YW9 2145 aa7.87□□□□□ -1.15
CCDC40-212ENST00000574799 TMEM249Q2WGJ8 235 aa7.87□□□□□ -1.15
CCDC40-212ENST00000574799 PIP4P1Q86T03 277 aa7.87□□□□□ -1.15
CCDC40-212ENST00000574799 OR10W1Q8NGF6 305 aa7.87□□□□□ -1.15
CCDC40-212ENST00000574799 OR4A5Q8NH83 315 aa7.87□□□□□ -1.15
CCDC40-212ENST00000574799 AP5S1Q9NUS5 200 aa7.87□□□□□ -1.15
CCDC40-212ENST00000574799 CACNA1HO95180 2353 aa7.86□□□□□ -1.15
CCDC40-212ENST00000574799 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.86□□□□□ -1.15
CCDC40-212ENST00000574799 SMIM27A0A1W2PRY6 76 aa7.86□□□□□ -1.15
CCDC40-212ENST00000574799 GGTLC3B5MD39 225 aa7.86□□□□□ -1.15
CCDC40-212ENST00000574799 NPIPB11E5RHQ5 1161 aa7.86□□□□□ -1.15
CCDC40-212ENST00000574799 TNFSF15O95150 251 aa7.86□□□□□ -1.15
CCDC40-212ENST00000574799 ADH4P08319 380 aa7.86□□□□□ -1.15
CCDC40-212ENST00000574799 CD46P15529 392 aa7.86□□□□□ -1.15
CCDC40-212ENST00000574799 TMEM177Q53S58 311 aa7.86□□□□□ -1.15
CCDC40-212ENST00000574799 RPL39P5Q59GN2 51 aa7.86□□□□□ -1.15
CCDC40-212ENST00000574799 PAXXQ9BUH6 204 aa7.86□□□□□ -1.15
CCDC40-212ENST00000574799 MS4A6AQ9H2W1 248 aa7.86□□□□□ -1.15
CCDC40-212ENST00000574799 IGHV1-24A0A0C4DH33 117 aa7.86□□□□□ -1.15
CCDC40-212ENST00000574799 G3V4G9 280 aa7.86□□□□□ -1.15
CCDC40-212ENST00000574799 MT-CO3P00414 261 aa7.86□□□□□ -1.15
CCDC40-212ENST00000574799 IGHV3-48P01763 117 aa7.86□□□□□ -1.15
CCDC40-212ENST00000574799 COL8A1P27658 744 aa7.86□□□□□ -1.15
CCDC40-212ENST00000574799 GUSBP1Q15486 140 aa7.86□□□□□ -1.15
CCDC40-212ENST00000574799 TBC1D28Q2M2D7 210 aa7.86□□□□□ -1.15
CCDC40-212ENST00000574799 C16orf54Q6UWD8 224 aa7.86□□□□□ -1.15
CCDC40-212ENST00000574799 VSTM2AQ8TAG5 236 aa7.86□□□□□ -1.15
CCDC40-212ENST00000574799 POM121L2Q96KW2 1035 aa7.86□□□□□ -1.15
CCDC40-212ENST00000574799 ZNF257Q9Y2Q1 563 aa7.86□□□□□ -1.15
CCDC40-212ENST00000574799 TRAV5A0A0B4J249 113 aa7.86□□□□□ -1.15
CCDC40-212ENST00000574799 PSPNO60542 156 aa7.86□□□□□ -1.15
CCDC40-212ENST00000574799 GFRA3O60609 400 aa7.86□□□□□ -1.15
CCDC40-212ENST00000574799 WT1P19544 449 aaPredicted RBP7.86□□□□□ -1.15
CCDC40-212ENST00000574799 GNG5P63218 68 aa7.86□□□□□ -1.15
CCDC40-212ENST00000574799 MEF2CQ06413 473 aaPredicted RBP7.86□□□□□ -1.15
CCDC40-212ENST00000574799 RNFT1Q5M7Z0 435 aa7.86□□□□□ -1.15
CCDC40-212ENST00000574799 Q6P435 159 aa7.86□□□□□ -1.15
CCDC40-212ENST00000574799 C9orf118A6NHY6 69 aa7.85□□□□□ -1.15
CCDC40-212ENST00000574799 DNPH1O43598 174 aa7.85□□□□□ -1.15
CCDC40-212ENST00000574799 SP1P08047 785 aa7.85□□□□□ -1.15
CCDC40-212ENST00000574799 PYYP10082 97 aa7.85□□□□□ -1.15
CCDC40-212ENST00000574799 OR5A1Q8NGJ0 315 aa7.85□□□□□ -1.15
CCDC40-212ENST00000574799 H3BTX0 84 aa7.85□□□□□ -1.15
CCDC40-212ENST00000574799 J3QR06 171 aa7.85□□□□□ -1.15
CCDC40-212ENST00000574799 K7EQM0 130 aa7.85□□□□□ -1.15
CCDC40-212ENST00000574799 APOHP02749 345 aaPredicted RBP7.85□□□□□ -1.15
CCDC40-212ENST00000574799 ORM2P19652 201 aa7.85□□□□□ -1.15
CCDC40-212ENST00000574799 CKS1BP61024 79 aa7.85□□□□□ -1.15
CCDC40-212ENST00000574799 FOXF2Q12947 444 aa7.85□□□□□ -1.15
CCDC40-212ENST00000574799 MOB3BQ86TA1 216 aa7.85□□□□□ -1.15
CCDC40-212ENST00000574799 MDS2Q8NDY4 140 aa7.85□□□□□ -1.15
CCDC40-212ENST00000574799 C5orf30Q96GV9 206 aa7.85□□□□□ -1.15
CCDC40-212ENST00000574799 K7EP34 96 aa7.85□□□□□ -1.15
CCDC40-212ENST00000574799 PEX7O00628 323 aa7.85□□□□□ -1.15
CCDC40-212ENST00000574799 TIMM8AO60220 97 aaPredicted RBP7.85□□□□□ -1.15
CCDC40-212ENST00000574799 HOXC12P31275 282 aa7.85□□□□□ -1.15
CCDC40-212ENST00000574799 HSD52Q0P140 79 aa7.85□□□□□ -1.15
CCDC40-212ENST00000574799 SPATA12Q7Z6I5 190 aa7.85□□□□□ -1.15
CCDC40-212ENST00000574799 PDPNQ86YL7 162 aa7.85□□□□□ -1.15
CCDC40-212ENST00000574799 OR13A1Q8NGR1 328 aa7.85□□□□□ -1.15
CCDC40-212ENST00000574799 PPP1R35Q8TAP8 253 aa7.85□□□□□ -1.15
CCDC40-212ENST00000574799 LEAP2Q969E1 77 aa7.85□□□□□ -1.15
CCDC40-212ENST00000574799 FLYWCH2Q96CP2 140 aaKnown RBP7.85□□□□□ -1.15
CCDC40-212ENST00000574799 TMUB1Q9BVT8 246 aa7.85□□□□□ -1.15
CCDC40-212ENST00000574799 COL25A1Q9BXS0 654 aaPredicted RBP7.85□□□□□ -1.15
CCDC40-212ENST00000574799 PGPA6NDG6 321 aa7.84□□□□□ -1.15
CCDC40-212ENST00000574799 HSPE1P61604 102 aaKnown RBP7.84□□□□□ -1.15
CCDC40-212ENST00000574799 HOXA4Q00056 320 aaPredicted RBP7.84□□□□□ -1.15
CCDC40-212ENST00000574799 LHFPL4Q7Z7J7 247 aa7.84□□□□□ -1.15
CCDC40-212ENST00000574799 WFDC12Q8WWY7 111 aa7.84□□□□□ -1.15
CCDC40-212ENST00000574799 CHCHD1Q96BP2 118 aaKnown RBP7.84□□□□□ -1.15
CCDC40-212ENST00000574799 SLC25A10Q9UBX3 287 aaPredicted RBP7.84□□□□□ -1.15
CCDC40-212ENST00000574799 FZR1Q9UM11 496 aa7.84□□□□□ -1.15
CCDC40-212ENST00000574799 TSSC4Q9Y5U2 329 aaPredicted RBP7.84□□□□□ -1.15
CCDC40-212ENST00000574799 J3QW42 95 aa7.84□□□□□ -1.15
CCDC40-212ENST00000574799 RASL11AQ6T310 242 aa7.84□□□□□ -1.15
CCDC40-212ENST00000574799 TEX45Q8NA69 505 aa7.84□□□□□ -1.15
CCDC40-212ENST00000574799 OR9G1Q8NH87 305 aa7.84□□□□□ -1.15
CCDC40-212ENST00000574799 SPTAN1Q13813 2472 aaKnown RBP7.84□□□□□ -1.15
CCDC40-212ENST00000574799 PPIAL4EA0A075B759 164 aa7.84□□□□□ -1.16
CCDC40-212ENST00000574799 TEX48A0A1B0GUV7 120 aa7.84□□□□□ -1.16
CCDC40-212ENST00000574799 FAM87AP0C7U9 286 aa7.84□□□□□ -1.16
CCDC40-212ENST00000574799 SMIM13P0DJ93 91 aa7.84□□□□□ -1.16
CCDC40-212ENST00000574799 PPIAL4FP0DN26 164 aa7.84□□□□□ -1.16
CCDC40-212ENST00000574799 MYOD1P15172 320 aa7.84□□□□□ -1.16
CCDC40-212ENST00000574799 SAMD5Q5TGI4 173 aa7.84□□□□□ -1.16
CCDC40-212ENST00000574799 C10orf113Q5VZT2 155 aa7.84□□□□□ -1.16
CCDC40-212ENST00000574799 B4GALT7Q9UBV7 327 aa7.84□□□□□ -1.16
CCDC40-212ENST00000574799 LSM4Q9Y4Z0 139 aaKnown RBP7.84□□□□□ -1.16
CCDC40-212ENST00000574799 IGKV3D-15A0A087WSY6 115 aa7.83□□□□□ -1.16
CCDC40-212ENST00000574799 SS18L1O75177 396 aaPredicted RBP7.83□□□□□ -1.16
CCDC40-212ENST00000574799 RAB9AP51151 201 aa7.83□□□□□ -1.16
CCDC40-212ENST00000574799 HES4Q9HCC6 221 aa7.83□□□□□ -1.16
CCDC40-212ENST00000574799 SCRT2Q9NQ03 307 aa7.83□□□□□ -1.16
CCDC40-212ENST00000574799 H3BRM9 83 aa7.83□□□□□ -1.16
CCDC40-212ENST00000574799 COX8AP10176 69 aa7.83□□□□□ -1.16
CCDC40-212ENST00000574799 MAGEA5P43359 124 aa7.83□□□□□ -1.16
CCDC40-212ENST00000574799 CYB561P49447 251 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms