RNA–Protein interactions for RNA: ENST00000574087.1

NUP88-208, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-208ENST00000574087 S100A13Q99584 98 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 ADAT1Q9BUB4 502 aaKnown RBP2.67□□□□□ -1.98
NUP88-208ENST00000574087 DERL1Q9BUN8 251 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 C1QTNF6Q9BXI9 259 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 SEC11CQ9BY50 192 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 MRPL32Q9BYC8 188 aaKnown RBP2.67□□□□□ -1.98
NUP88-208ENST00000574087 SLC25A31Q9H0C2 315 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 LINC00597Q9H2U6 94 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 PARP11Q9NR21 331 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 RPRMQ9NS64 109 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 TAS2R8Q9NYW2 309 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 ZNF629Q9UEG4 869 aaPredicted RBP2.67□□□□□ -1.98
NUP88-208ENST00000574087 V9GYH0 126 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 RGPD1P0DJD0 1748 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 NWD2Q9ULI1 1742 aa2.67□□□□□ -1.98
NUP88-208ENST00000574087 BRCA1P38398 1863 aaKnown RBP2.67□□□□□ -1.98
NUP88-208ENST00000574087 RGPD8O14715 1765 aaPredicted RBP2.66□□□□□ -1.98
NUP88-208ENST00000574087 RGPD5Q99666 1765 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 TET3O43151 1660 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 ERCC6L2Q5T890 1561 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 VWA8A3KMH1 1905 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 A2ML1A8K2U0 1454 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 A0A0B4J2A0 478 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 A0A1W2PP18 115 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 A0A1W2PRS3 328 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 OR4C45A6NMZ5 311 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 RIIAD1A6NNX1 92 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 MCRIP1C9JLW8 97 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 J3QT63 122 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 OR2T1O43869 369 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 ARL6IP5O75915 188 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 NCR2O95944 276 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 CXorf1O96002 111 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 CFDP00746 253 aaPredicted RBP2.66□□□□□ -1.98
NUP88-208ENST00000574087 SOD3P08294 240 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 IGLC1P0CG04 106 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 CTLA4P16410 223 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 CCL1P22362 96 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 PRSS3P35030 304 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 CCR2P41597 374 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 LPAR6P43657 344 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 ZNF140P52738 457 aaPredicted RBP2.66□□□□□ -1.98
NUP88-208ENST00000574087 FOXA1P55317 472 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 UBA52P62987 128 aaKnown RBP2.66□□□□□ -1.98
NUP88-208ENST00000574087 ZNF92Q03936 586 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 ZNF141Q15928 474 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 Q499Y3 187 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 SPANXN3Q5MJ09 141 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 Q6Q795 121 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 DGAT2L6Q6ZPD8 337 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 DAZ4Q86SG3 579 aaKnown RBP2.66□□□□□ -1.98
NUP88-208ENST00000574087 TTC9CQ8N5M4 171 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 PPTC7Q8NI37 304 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 LINC01587Q99440 93 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 SDF2Q99470 211 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 SFXN3Q9BWM7 321 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 GGTLC1Q9BX51 225 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 TMEM9BQ9NQ34 198 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 DAZ1Q9NQZ3 744 aaKnown RBP2.66□□□□□ -1.98
NUP88-208ENST00000574087 LAMTOR3Q9UHA4 124 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 SHPKQ9UHJ6 478 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 SIGLEC7Q9Y286 467 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 SOX21Q9Y651 276 aaPredicted RBP2.66□□□□□ -1.98
NUP88-208ENST00000574087 KIF26AQ9ULI4 1882 aaPredicted RBP2.66□□□□□ -1.98
NUP88-208ENST00000574087 SLIT1O75093 1534 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 TECPR2O15040 1411 aa2.66□□□□□ -1.98
NUP88-208ENST00000574087 LRP5O75197 1615 aa2.65□□□□□ -1.98
NUP88-208ENST00000574087 LRP6O75581 1613 aa2.65□□□□□ -1.98
NUP88-208ENST00000574087 TRAV8-2A0A0B4J237 113 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 TRAV4A0A0B4J268 109 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 IGHV3-66A0A0C4DH42 116 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 A0A0D9SG52 128 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 GGT3PA6NGU5 568 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 B4DEV8 164 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 GGTLC3B5MD39 225 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 F6UB75 175 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 G3V3Q6 166 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 CCDC179H3BU77 68 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 H7C1H1 209 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 J3QQQ9 107 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 K7EPK0 472 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 SLC37A4O43826 429 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 PDCD6O75340 191 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 TNFP01375 233 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 OR12D1P0DN82 309 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 BCL2P10415 239 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 ERGP11308 486 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 ATP5G3P48201 142 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 C1DQ13901 141 aaKnown RBP2.65□□□□□ -1.99
NUP88-208ENST00000574087 MMDQ15546 238 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 IQCJQ1A5X6 159 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 KHDC3LQ587J8 217 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 TTC32Q5I0X7 151 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 TMEM244Q5VVB8 128 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 DNAJC24Q6P3W2 148 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 TMEM14EPQ6UXP3 125 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 OR11H7Q8NGC8 314 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 FRZBQ92765 325 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 TMEM230Q96A57 120 aa2.65□□□□□ -1.99
NUP88-208ENST00000574087 OR2A5Q96R48 311 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms