RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 SULT1A3P0DMM9 295 aa12.81□□□□□ -0.36
SMG6-214ENST00000573827 SULT1A4P0DMN0 295 aa12.81□□□□□ -0.36
SMG6-214ENST00000573827 BMI1P35226 326 aa12.81□□□□□ -0.36
SMG6-214ENST00000573827 SCGB3A2Q96PL1 93 aa12.81□□□□□ -0.36
SMG6-214ENST00000573827 A0A0J9YWU9 116 aa12.8□□□□□ -0.36
SMG6-214ENST00000573827 AKR1C4P17516 323 aa12.8□□□□□ -0.36
SMG6-214ENST00000573827 RND2P52198 227 aa12.8□□□□□ -0.36
SMG6-214ENST00000573827 LYG2Q86SG7 212 aa12.8□□□□□ -0.36
SMG6-214ENST00000573827 STPG3Q8N7X2 389 aa12.8□□□□□ -0.36
SMG6-214ENST00000573827 KCNIP3Q9Y2W7 256 aa12.8□□□□□ -0.36
SMG6-214ENST00000573827 CEBPZOSA8MTT3 80 aa12.79□□□□□ -0.36
SMG6-214ENST00000573827 PITX3O75364 302 aa12.79□□□□□ -0.36
SMG6-214ENST00000573827 SLC25A4P12235 298 aa12.79□□□□□ -0.36
SMG6-214ENST00000573827 NPY1RP25929 384 aa12.79□□□□□ -0.36
SMG6-214ENST00000573827 CCR6P51684 374 aa12.79□□□□□ -0.36
SMG6-214ENST00000573827 CMC4P56277 68 aaPredicted RBP12.79□□□□□ -0.36
SMG6-214ENST00000573827 YPEL3P61236 119 aaPredicted RBP12.79□□□□□ -0.36
SMG6-214ENST00000573827 TRAV30A0A087WSZ9 112 aa12.78□□□□□ -0.36
SMG6-214ENST00000573827 RPS10-NUDT3A0A1W2PQS6 291 aa12.78□□□□□ -0.36
SMG6-214ENST00000573827 ATF4P18848 351 aaPredicted RBP12.78□□□□□ -0.36
SMG6-214ENST00000573827 NPPCP23582 126 aa12.78□□□□□ -0.36
SMG6-214ENST00000573827 SMCO1Q147U7 214 aa12.78□□□□□ -0.36
SMG6-214ENST00000573827 RBMS2Q15434 407 aaKnown RBP12.78□□□□□ -0.36
SMG6-214ENST00000573827 PYDC2Q56P42 97 aa12.78□□□□□ -0.36
SMG6-214ENST00000573827 OR1S2Q8NGQ3 325 aa12.78□□□□□ -0.36
SMG6-214ENST00000573827 DCANP1Q8TF63 244 aa12.78□□□□□ -0.36
SMG6-214ENST00000573827 METTL26Q96S19 204 aa12.78□□□□□ -0.36
SMG6-214ENST00000573827 CSTL1Q9H114 145 aa12.78□□□□□ -0.36
SMG6-214ENST00000573827 CACFD1Q9UGQ2 172 aa12.78□□□□□ -0.36
SMG6-214ENST00000573827 K7EQG2 157 aa12.77□□□□□ -0.37
SMG6-214ENST00000573827 GIG44P09565 113 aaPredicted RBP12.77□□□□□ -0.37
SMG6-214ENST00000573827 OR10J1P30954 320 aa12.77□□□□□ -0.37
SMG6-214ENST00000573827 P2RY1P47900 373 aa12.77□□□□□ -0.37
SMG6-214ENST00000573827 USF2Q15853 346 aaPredicted RBP12.77□□□□□ -0.37
SMG6-214ENST00000573827 LGI3Q8N145 548 aa12.77□□□□□ -0.37
SMG6-214ENST00000573827 LRTM2Q8N967 370 aa12.77□□□□□ -0.37
SMG6-214ENST00000573827 RBKSQ9H477 322 aa12.77□□□□□ -0.37
SMG6-214ENST00000573827 ZNF701M0R085 212 aaPredicted RBP12.76□□□□□ -0.37
SMG6-214ENST00000573827 DEFB131AP59861 70 aa12.76□□□□□ -0.37
SMG6-214ENST00000573827 PAFAH1B2P68402 229 aa12.76□□□□□ -0.37
SMG6-214ENST00000573827 SRPXP78539 464 aa12.76□□□□□ -0.37
SMG6-214ENST00000573827 TMEM128Q5BJH2 165 aa12.76□□□□□ -0.37
SMG6-214ENST00000573827 TOMM5Q8N4H5 51 aa12.76□□□□□ -0.37
SMG6-214ENST00000573827 DTD1Q8TEA8 209 aa12.76□□□□□ -0.37
SMG6-214ENST00000573827 GLMPQ8WWB7 406 aa12.76□□□□□ -0.37
SMG6-214ENST00000573827 DEDD2Q8WXF8 326 aa12.76□□□□□ -0.37
SMG6-214ENST00000573827 NPIPB3Q92617 1050 aa12.76□□□□□ -0.37
SMG6-214ENST00000573827 SRRQ9GZT4 340 aa12.76□□□□□ -0.37
SMG6-214ENST00000573827 TMEM231Q9H6L2 316 aa12.76□□□□□ -0.37
SMG6-214ENST00000573827 U3KQ87 197 aa12.76□□□□□ -0.37
SMG6-214ENST00000573827 IGKV1D-37A0A075B6S9 117 aa12.75□□□□□ -0.37
SMG6-214ENST00000573827 A0A1W2PS18 150 aa12.75□□□□□ -0.37
SMG6-214ENST00000573827 MPTX1A8MV57 137 aa12.75□□□□□ -0.37
SMG6-214ENST00000573827 FAUP35544 74 aaKnown RBP12.75□□□□□ -0.37
SMG6-214ENST00000573827 AP3S2P59780 193 aa12.75□□□□□ -0.37
SMG6-214ENST00000573827 LEMD1Q68G75 181 aa12.75□□□□□ -0.37
SMG6-214ENST00000573827 C16orf54Q6UWD8 224 aa12.75□□□□□ -0.37
SMG6-214ENST00000573827 GRAMD2BQ96HH9 432 aa12.75□□□□□ -0.37
SMG6-214ENST00000573827 DUXBA0A1W2PPF3 345 aa12.74□□□□□ -0.37
SMG6-214ENST00000573827 ANXA3P12429 323 aa12.74□□□□□ -0.37
SMG6-214ENST00000573827 TMED4Q7Z7H5 227 aa12.74□□□□□ -0.37
SMG6-214ENST00000573827 GATAD1Q8WUU5 269 aa12.74□□□□□ -0.37
SMG6-214ENST00000573827 SLC25A21Q9BQT8 299 aaPredicted RBP12.74□□□□□ -0.37
SMG6-214ENST00000573827 DNASE2O00115 360 aaPredicted RBP12.73□□□□□ -0.37
SMG6-214ENST00000573827 TOMM40O96008 361 aa12.73□□□□□ -0.37
SMG6-214ENST00000573827 IFNA10P01566 189 aa12.73□□□□□ -0.37
SMG6-214ENST00000573827 HNRNPCP07910 306 aaKnown RBP eCLIP12.73□□□□□ -0.37
SMG6-214ENST00000573827 ATP5IP56385 69 aaPredicted RBP12.73□□□□□ -0.37
SMG6-214ENST00000573827 PPP1R1AQ13522 171 aa12.73□□□□□ -0.37
SMG6-214ENST00000573827 ETFRF1Q6IPR1 90 aa12.73□□□□□ -0.37
SMG6-214ENST00000573827 TRPT1Q86TN4 253 aaKnown RBP12.73□□□□□ -0.37
SMG6-214ENST00000573827 NOXA1Q86UR1 476 aa12.73□□□□□ -0.37
SMG6-214ENST00000573827 Q8WTZ3 238 aa12.73□□□□□ -0.37
SMG6-214ENST00000573827 ACY3Q96HD9 319 aa12.73□□□□□ -0.37
SMG6-214ENST00000573827 SDHCQ99643 169 aaPredicted RBP12.73□□□□□ -0.37
SMG6-214ENST00000573827 RABAC1Q9UI14 185 aa12.73□□□□□ -0.37
SMG6-214ENST00000573827 CCDC160A6NGH7 325 aa12.72□□□□□ -0.37
SMG6-214ENST00000573827 BUB3O43684 328 aa12.72□□□□□ -0.37
SMG6-214ENST00000573827 SCGB2A1O75556 95 aa12.72□□□□□ -0.37
SMG6-214ENST00000573827 SFT2D2O95562 160 aa12.72□□□□□ -0.37
SMG6-214ENST00000573827 IL4P05112 153 aa12.72□□□□□ -0.37
SMG6-214ENST00000573827 PSG1P11464 419 aa12.72□□□□□ -0.37
SMG6-214ENST00000573827 SLC25A6P12236 298 aa12.72□□□□□ -0.37
SMG6-214ENST00000573827 S100A5P33763 92 aa12.72□□□□□ -0.37
SMG6-214ENST00000573827 RPL11P62913 178 aaKnown RBP12.72□□□□□ -0.37
SMG6-214ENST00000573827 GAMTQ14353 236 aa12.72□□□□□ -0.37
SMG6-214ENST00000573827 BAK1Q16611 211 aa12.72□□□□□ -0.37
SMG6-214ENST00000573827 STXBP6Q8NFX7 210 aa12.72□□□□□ -0.37
SMG6-214ENST00000573827 PRSS46E5RG02 174 aa12.71□□□□□ -0.37
SMG6-214ENST00000573827 JTBO76095 146 aa12.71□□□□□ -0.37
SMG6-214ENST00000573827 RD3LP0DJH9 198 aa12.71□□□□□ -0.37
SMG6-214ENST00000573827 GPX4P36969 197 aaPredicted RBP12.71□□□□□ -0.37
SMG6-214ENST00000573827 PMS2P11Q13670 270 aa12.71□□□□□ -0.37
SMG6-214ENST00000573827 OR1S1Q8NH92 325 aa12.71□□□□□ -0.37
SMG6-214ENST00000573827 IGKV1OR2-108A0A075B7D4 117 aa12.7□□□□□ -0.38
SMG6-214ENST00000573827 FAM90A26D6RGX4 464 aa12.7□□□□□ -0.38
SMG6-214ENST00000573827 CA1P00915 261 aaPredicted RBP12.7□□□□□ -0.38
SMG6-214ENST00000573827 ZNF688P0C7X2 276 aa12.7□□□□□ -0.38
SMG6-214ENST00000573827 CEMP1Q6PRD7 247 aaPredicted RBP12.7□□□□□ -0.38
SMG6-214ENST00000573827 LINC00476Q8WZB0 136 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms