RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 NPPCP23582 126 aa15□□□□□ -0.01
NUP88-204ENST00000572290 OR10J1P30954 320 aa15□□□□□ -0.01
NUP88-204ENST00000572290 BTCP35070 178 aa15□□□□□ -0.01
NUP88-204ENST00000572290 ODF3L2Q3SX64 289 aa15□□□□□ -0.01
NUP88-204ENST00000572290 FAM90A2PQ658T7 463 aa15□□□□□ -0.01
NUP88-204ENST00000572290 TCF24Q7RTU0 167 aa15□□□□□ -0.01
NUP88-204ENST00000572290 NPIPB3Q92617 1050 aa15□□□□□ -0.01
NUP88-204ENST00000572290 GGTLC1Q9BX51 225 aa15□□□□□ -0.01
NUP88-204ENST00000572290 RETNQ9HD89 108 aa15□□□□□ -0.01
NUP88-204ENST00000572290 IGKV3-7A0A075B6H7 116 aa14.99□□□□□ -0.01
NUP88-204ENST00000572290 IGHV3-66A0A0C4DH42 116 aa14.99□□□□□ -0.01
NUP88-204ENST00000572290 C3orf84H3BNL1 204 aa14.99□□□□□ -0.01
NUP88-204ENST00000572290 IFNA4P05014 189 aa14.99□□□□□ -0.01
NUP88-204ENST00000572290 TFPI2P48307 235 aa14.99□□□□□ -0.01
NUP88-204ENST00000572290 GGNBP1Q5YKI7 109 aa14.99□□□□□ -0.01
NUP88-204ENST00000572290 MUC7Q8TAX7 377 aa14.99□□□□□ -0.01
NUP88-204ENST00000572290 Q8WTZ3 238 aa14.99□□□□□ -0.01
NUP88-204ENST00000572290 ACY3Q96HD9 319 aa14.99□□□□□ -0.01
NUP88-204ENST00000572290 METTL26Q96S19 204 aa14.99□□□□□ -0.01
NUP88-204ENST00000572290 FAM110AQ9BQ89 295 aa14.99□□□□□ -0.01
NUP88-204ENST00000572290 TMEM231Q9H6L2 316 aa14.99□□□□□ -0.01
NUP88-204ENST00000572290 A0A1W2PS18 150 aa14.98□□□□□ -0.01
NUP88-204ENST00000572290 MED6O75586 246 aa14.98□□□□□ -0.01
NUP88-204ENST00000572290 OR4E1P0C645 316 aa14.98□□□□□ -0.01
NUP88-204ENST00000572290 IAPPP10997 89 aa14.98□□□□□ -0.01
NUP88-204ENST00000572290 YPEL3P61236 119 aaPredicted RBP14.98□□□□□ -0.01
NUP88-204ENST00000572290 PAFAH1B2P68402 229 aa14.98□□□□□ -0.01
NUP88-204ENST00000572290 LILRB2Q8N423 598 aa14.98□□□□□ -0.01
NUP88-204ENST00000572290 COQ8AQ8NI60 647 aa14.98□□□□□ -0.01
NUP88-204ENST00000572290 EDA2RQ9HAV5 297 aa14.98□□□□□ -0.01
NUP88-204ENST00000572290 KMT2CQ8NEZ4 4911 aaKnown RBP14.97□□□□□ -0.01
NUP88-204ENST00000572290 DFFBO76075 338 aa14.97□□□□□ -0.01
NUP88-204ENST00000572290 ANXA7P20073 488 aaKnown RBP14.97□□□□□ -0.01
NUP88-204ENST00000572290 CRYBB3P26998 211 aa14.97□□□□□ -0.01
NUP88-204ENST00000572290 CMC4P56277 68 aaPredicted RBP14.97□□□□□ -0.01
NUP88-204ENST00000572290 DHRS2Q13268 280 aa14.97□□□□□ -0.01
NUP88-204ENST00000572290 CNPY1Q3B7I2 92 aa14.97□□□□□ -0.01
NUP88-204ENST00000572290 LYG2Q86SG7 212 aa14.97□□□□□ -0.01
NUP88-204ENST00000572290 GBGT1Q8N5D6 347 aa14.97□□□□□ -0.01
NUP88-204ENST00000572290 NARS2Q96I59 477 aaKnown RBP14.97□□□□□ -0.01
NUP88-204ENST00000572290 PLA2G10O15496 165 aa14.96□□□□□ -0.01
NUP88-204ENST00000572290 ADAP1O75689 374 aa14.96□□□□□ -0.01
NUP88-204ENST00000572290 GPX4P36969 197 aaPredicted RBP14.96□□□□□ -0.01
NUP88-204ENST00000572290 RAB11AP62491 216 aa14.96□□□□□ -0.01
NUP88-204ENST00000572290 C4orf46Q504U0 113 aa14.96□□□□□ -0.01
NUP88-204ENST00000572290 CIB3Q96Q77 187 aaPredicted RBP14.96□□□□□ -0.01
NUP88-204ENST00000572290 MAGT1Q9H0U3 335 aa14.96□□□□□ -0.01
NUP88-204ENST00000572290 LYRM1O43325 122 aa14.95□□□□□ -0.02
NUP88-204ENST00000572290 SYNGR2O43760 224 aa14.95□□□□□ -0.02
NUP88-204ENST00000572290 RPL11P62913 178 aaKnown RBP14.95□□□□□ -0.02
NUP88-204ENST00000572290 LINC00299Q6ZSB3 139 aa14.95□□□□□ -0.02
NUP88-204ENST00000572290 WFDC3Q8IUB2 231 aa14.95□□□□□ -0.02
NUP88-204ENST00000572290 SLC35E1Q96K37 410 aa14.95□□□□□ -0.02
NUP88-204ENST00000572290 PAIP2BQ9ULR5 123 aaKnown RBP14.95□□□□□ -0.02
NUP88-204ENST00000572290 TENM3Q9P273 2699 aa14.95□□□□□ -0.02
NUP88-204ENST00000572290 DNASE2O00115 360 aaPredicted RBP14.94□□□□□ -0.02
NUP88-204ENST00000572290 WRBO00258 174 aa14.94□□□□□ -0.02
NUP88-204ENST00000572290 TOMM40O96008 361 aa14.94□□□□□ -0.02
NUP88-204ENST00000572290 IFNA21P01568 189 aa14.94□□□□□ -0.02
NUP88-204ENST00000572290 RD3LP0DJH9 198 aa14.94□□□□□ -0.02
NUP88-204ENST00000572290 RPP30P78346 268 aaKnown RBP14.94□□□□□ -0.02
NUP88-204ENST00000572290 GRAMD2BQ96HH9 432 aa14.94□□□□□ -0.02
NUP88-204ENST00000572290 CCDC32Q9BV29 185 aa14.94□□□□□ -0.02
NUP88-204ENST00000572290 MS4A6AQ9H2W1 248 aa14.94□□□□□ -0.02
NUP88-204ENST00000572290 STAB2Q8WWQ8 2551 aa14.94□□□□□ -0.02
NUP88-204ENST00000572290 TRAV2A0A0B4J234 112 aa14.93□□□□□ -0.02
NUP88-204ENST00000572290 IL4P05112 153 aa14.93□□□□□ -0.02
NUP88-204ENST00000572290 HNRNPCP07910 306 aaKnown RBP eCLIP14.93□□□□□ -0.02
NUP88-204ENST00000572290 P2RY1P47900 373 aa14.93□□□□□ -0.02
NUP88-204ENST00000572290 APOC4P55056 127 aa14.93□□□□□ -0.02
NUP88-204ENST00000572290 GAMTQ14353 236 aa14.93□□□□□ -0.02
NUP88-204ENST00000572290 APRG1Q8IVJ8 170 aa14.93□□□□□ -0.02
NUP88-204ENST00000572290 C20orf85Q9H1P6 137 aa14.93□□□□□ -0.02
NUP88-204ENST00000572290 U3KQE9 123 aa14.93□□□□□ -0.02
NUP88-204ENST00000572290 DNAH7Q8WXX0 4024 aa14.93□□□□□ -0.02
NUP88-204ENST00000572290 MPTX1A8MV57 137 aa14.92□□□□□ -0.02
NUP88-204ENST00000572290 LYL1P12980 280 aa14.92□□□□□ -0.02
NUP88-204ENST00000572290 USF2Q15853 346 aaPredicted RBP14.92□□□□□ -0.02
NUP88-204ENST00000572290 MAP6D1Q9H9H5 199 aa14.92□□□□□ -0.02
NUP88-204ENST00000572290 RABAC1Q9UI14 185 aa14.92□□□□□ -0.02
NUP88-204ENST00000572290 A6NHS1 94 aa14.91□□□□□ -0.02
NUP88-204ENST00000572290 ZFP92A6NM28 416 aa14.91□□□□□ -0.02
NUP88-204ENST00000572290 PSG1P11464 419 aa14.91□□□□□ -0.02
NUP88-204ENST00000572290 RPL35AP18077 110 aaKnown RBP14.91□□□□□ -0.02
NUP88-204ENST00000572290 ID3Q02535 119 aa14.91□□□□□ -0.02
NUP88-204ENST00000572290 CASC10Q5T4H9 136 aa14.91□□□□□ -0.02
NUP88-204ENST00000572290 S100ZQ8WXG8 99 aa14.91□□□□□ -0.02
NUP88-204ENST00000572290 KIR2DL5BA0A0G2JN68 375 aa14.9□□□□□ -0.02
NUP88-204ENST00000572290 KIR2DL5BA0A0G2JPC4 375 aa14.9□□□□□ -0.02
NUP88-204ENST00000572290 UBE2CO00762 179 aa14.9□□□□□ -0.02
NUP88-204ENST00000572290 TCRBP04435 133 aa14.9□□□□□ -0.02
NUP88-204ENST00000572290 NKX2-1P43699 371 aaPredicted RBP14.9□□□□□ -0.02
NUP88-204ENST00000572290 ZNF124Q15973 351 aa14.9□□□□□ -0.02
NUP88-204ENST00000572290 SPANXN5Q5MJ07 72 aa14.9□□□□□ -0.02
NUP88-204ENST00000572290 KIR2DL5AQ8N109 375 aa14.9□□□□□ -0.02
NUP88-204ENST00000572290 STXBP6Q8NFX7 210 aa14.9□□□□□ -0.02
NUP88-204ENST00000572290 OR51G1Q8NGK1 321 aa14.9□□□□□ -0.02
NUP88-204ENST00000572290 OR4D5Q8NGN0 318 aa14.9□□□□□ -0.02
NUP88-204ENST00000572290 KIR2DL5BQ8NHK3 375 aa14.9□□□□□ -0.02
NUP88-204ENST00000572290 MITD1Q8WV92 249 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms