RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 EBAG9O00559 213 aa8.94□□□□□ -0.98
CCDC40-208ENST00000572270 GSTZ1O43708 216 aaPredicted RBP8.94□□□□□ -0.98
CCDC40-208ENST00000572270 RLN1P04808 185 aa8.94□□□□□ -0.98
CCDC40-208ENST00000572270 P0C879 139 aa8.94□□□□□ -0.98
CCDC40-208ENST00000572270 TSPOP30536 169 aa8.94□□□□□ -0.98
CCDC40-208ENST00000572270 LINC00528Q8N1L1 170 aa8.94□□□□□ -0.98
CCDC40-208ENST00000572270 IGF2BP2-AS1Q96M15 143 aa8.94□□□□□ -0.98
CCDC40-208ENST00000572270 ABHD1Q96SE0 405 aa8.94□□□□□ -0.98
CCDC40-208ENST00000572270 TRAV30A0A087WSZ9 112 aa8.93□□□□□ -0.98
CCDC40-208ENST00000572270 IGLV5-52A0A0A0MRZ9 124 aa8.93□□□□□ -0.98
CCDC40-208ENST00000572270 A0A0J9YY99 117 aa8.93□□□□□ -0.98
CCDC40-208ENST00000572270 TMEM235A6NFC5 223 aa8.93□□□□□ -0.98
CCDC40-208ENST00000572270 SIVA1O15304 175 aa8.93□□□□□ -0.98
CCDC40-208ENST00000572270 PRM2P04554 102 aa8.93□□□□□ -0.98
CCDC40-208ENST00000572270 M6PRP20645 277 aa8.93□□□□□ -0.98
CCDC40-208ENST00000572270 OPRK1P41145 380 aa8.93□□□□□ -0.98
CCDC40-208ENST00000572270 B2MP61769 119 aa8.93□□□□□ -0.98
CCDC40-208ENST00000572270 TIGITQ495A1 244 aa8.93□□□□□ -0.98
CCDC40-208ENST00000572270 FAM78BQ5VT40 261 aa8.93□□□□□ -0.98
CCDC40-208ENST00000572270 TMEM91Q6ZNR0 172 aa8.93□□□□□ -0.98
CCDC40-208ENST00000572270 OR10J6PQ8NGY7 276 aa8.93□□□□□ -0.98
CCDC40-208ENST00000572270 OR4X1Q8NH49 305 aa8.93□□□□□ -0.98
CCDC40-208ENST00000572270 RNF125Q96EQ8 232 aa8.93□□□□□ -0.98
CCDC40-208ENST00000572270 PSORS1C1Q9UIG5 152 aa8.93□□□□□ -0.98
CCDC40-208ENST00000572270 PTHLHP12272 177 aa8.92□□□□□ -0.98
CCDC40-208ENST00000572270 PSMB3P49720 205 aa8.92□□□□□ -0.98
CCDC40-208ENST00000572270 RASSF2P50749 326 aa8.92□□□□□ -0.98
CCDC40-208ENST00000572270 SUB1P53999 127 aaKnown RBP eCLIP8.92□□□□□ -0.98
CCDC40-208ENST00000572270 HERV-K104P61576 105 aa8.92□□□□□ -0.98
CCDC40-208ENST00000572270 RPS25P62851 125 aaKnown RBP8.92□□□□□ -0.98
CCDC40-208ENST00000572270 TRAM1Q15629 374 aa8.92□□□□□ -0.98
CCDC40-208ENST00000572270 ZFP1Q6P2D0 407 aa8.92□□□□□ -0.98
CCDC40-208ENST00000572270 BEST4Q8NFU0 473 aa8.92□□□□□ -0.98
CCDC40-208ENST00000572270 Q8WTZ3 238 aa8.92□□□□□ -0.98
CCDC40-208ENST00000572270 CYGBQ8WWM9 190 aa8.92□□□□□ -0.98
CCDC40-208ENST00000572270 FAT3Q8TDW7 4589 aa8.92□□□□□ -0.98
CCDC40-208ENST00000572270 PDCD5O14737 125 aa8.91□□□□□ -0.98
CCDC40-208ENST00000572270 CASQ2O14958 399 aaPredicted RBP8.91□□□□□ -0.98
CCDC40-208ENST00000572270 INSP01308 110 aa8.91□□□□□ -0.98
CCDC40-208ENST00000572270 IGKV1-17P01599 117 aa8.91□□□□□ -0.98
CCDC40-208ENST00000572270 PAX9P55771 341 aa8.91□□□□□ -0.98
CCDC40-208ENST00000572270 HSPE1P61604 102 aaKnown RBP8.91□□□□□ -0.98
CCDC40-208ENST00000572270 SPHARQ15513 63 aa8.91□□□□□ -0.98
CCDC40-208ENST00000572270 H2BFWTQ7Z2G1 175 aa8.91□□□□□ -0.98
CCDC40-208ENST00000572270 MRPL36Q9P0J6 103 aaKnown RBP8.91□□□□□ -0.98
CCDC40-208ENST00000572270 TNFRSF18Q9Y5U5 241 aa8.91□□□□□ -0.98
CCDC40-208ENST00000572270 PLAC8L1A1L4L8 177 aa8.9□□□□□ -0.98
CCDC40-208ENST00000572270 IFITM5A6NNB3 132 aa8.9□□□□□ -0.98
CCDC40-208ENST00000572270 F6UB75 175 aa8.9□□□□□ -0.98
CCDC40-208ENST00000572270 BUB3O43684 328 aa8.9□□□□□ -0.98
CCDC40-208ENST00000572270 SSX5O60225 188 aa8.9□□□□□ -0.98
CCDC40-208ENST00000572270 IL4P05112 153 aa8.9□□□□□ -0.98
CCDC40-208ENST00000572270 PSMA1P25786 263 aaKnown RBP8.9□□□□□ -0.98
CCDC40-208ENST00000572270 SPINK9Q5DT21 86 aa8.9□□□□□ -0.98
CCDC40-208ENST00000572270 SLC35G3Q8N808 338 aa8.9□□□□□ -0.98
CCDC40-208ENST00000572270 OR1S2Q8NGQ3 325 aa8.9□□□□□ -0.98
CCDC40-208ENST00000572270 OR6F1Q8NGZ6 308 aa8.9□□□□□ -0.98
CCDC40-208ENST00000572270 TIMM8BQ9Y5J9 83 aaPredicted RBP8.9□□□□□ -0.98
CCDC40-208ENST00000572270 A0A0J9YX75 114 aa8.89□□□□□ -0.99
CCDC40-208ENST00000572270 ZNF701M0R085 212 aaPredicted RBP8.89□□□□□ -0.99
CCDC40-208ENST00000572270 PGLYRP1O75594 196 aaPredicted RBP8.89□□□□□ -0.99
CCDC40-208ENST00000572270 ADAP1O75689 374 aa8.89□□□□□ -0.99
CCDC40-208ENST00000572270 SCGNO76038 276 aa8.89□□□□□ -0.99
CCDC40-208ENST00000572270 NUP62P37198 522 aaPredicted RBP8.89□□□□□ -0.99
CCDC40-208ENST00000572270 OR10A3P58181 314 aa8.89□□□□□ -0.99
CCDC40-208ENST00000572270 CMTM1Q8IZ96 169 aa8.89□□□□□ -0.99
CCDC40-208ENST00000572270 NTN5Q8WTR8 489 aaPredicted RBP8.89□□□□□ -0.99
CCDC40-208ENST00000572270 C16orf74Q96GX8 76 aa8.89□□□□□ -0.99
CCDC40-208ENST00000572270 WDR12Q9GZL7 423 aaKnown RBP8.89□□□□□ -0.99
CCDC40-208ENST00000572270 DOK5Q9P104 306 aa8.89□□□□□ -0.99
CCDC40-208ENST00000572270 KLK11Q9UBX7 282 aa8.89□□□□□ -0.99
CCDC40-208ENST00000572270 NPIPB6E9PJ23 425 aa8.88□□□□□ -0.99
CCDC40-208ENST00000572270 H3BNG1 76 aa8.88□□□□□ -0.99
CCDC40-208ENST00000572270 AZU1P20160 251 aa8.88□□□□□ -0.99
CCDC40-208ENST00000572270 DHODHQ02127 395 aa8.88□□□□□ -0.99
CCDC40-208ENST00000572270 SFXN4Q6P4A7 337 aa8.88□□□□□ -0.99
CCDC40-208ENST00000572270 RPRMQ9NS64 109 aa8.88□□□□□ -0.99
CCDC40-208ENST00000572270 LSM2Q9Y333 95 aaKnown RBP8.88□□□□□ -0.99
CCDC40-208ENST00000572270 M0R2Z0 102 aa8.87□□□□□ -0.99
CCDC40-208ENST00000572270 HSMCR30P0CW71 290 aa8.87□□□□□ -0.99
CCDC40-208ENST00000572270 OR10J1P30954 320 aa8.87□□□□□ -0.99
CCDC40-208ENST00000572270 YPEL3P61236 119 aaPredicted RBP8.87□□□□□ -0.99
CCDC40-208ENST00000572270 MLANAQ16655 118 aa8.87□□□□□ -0.99
CCDC40-208ENST00000572270 SPINK13Q1W4C9 94 aa8.87□□□□□ -0.99
CCDC40-208ENST00000572270 PLCXD1Q9NUJ7 323 aa8.87□□□□□ -0.99
CCDC40-208ENST00000572270 FAM30AQ9NZY2 134 aa8.87□□□□□ -0.99
CCDC40-208ENST00000572270 PFDN2Q9UHV9 154 aa8.87□□□□□ -0.99
CCDC40-208ENST00000572270 TRAV9-2A0A087WT02 112 aa8.86□□□□□ -0.99
CCDC40-208ENST00000572270 NXPH4O95158 308 aa8.86□□□□□ -0.99
CCDC40-208ENST00000572270 IGLC1P0CG04 106 aa8.86□□□□□ -0.99
CCDC40-208ENST00000572270 RNASE2P10153 161 aaKnown RBP8.86□□□□□ -0.99
CCDC40-208ENST00000572270 HTN1P15515 57 aa8.86□□□□□ -0.99
CCDC40-208ENST00000572270 MYL9P24844 172 aa8.86□□□□□ -0.99
CCDC40-208ENST00000572270 RPL5P46777 297 aaKnown RBP8.86□□□□□ -0.99
CCDC40-208ENST00000572270 FABP5Q01469 135 aa8.86□□□□□ -0.99
CCDC40-208ENST00000572270 TBCEQ15813 527 aaPredicted RBP8.86□□□□□ -0.99
CCDC40-208ENST00000572270 HOGA1Q86XE5 327 aa8.86□□□□□ -0.99
CCDC40-208ENST00000572270 GPR146Q96CH1 333 aa8.86□□□□□ -0.99
CCDC40-208ENST00000572270 SEC22AQ96IW7 307 aa8.86□□□□□ -0.99
CCDC40-208ENST00000572270 LINC01587Q99440 93 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms