RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 OR4E1P0C645 316 aa7.62□□□□□ -1.19
GTF3C1-213ENST00000571886 IGLC1P0CG04 106 aa7.62□□□□□ -1.19
GTF3C1-213ENST00000571886 UBE2MP61081 183 aaKnown RBP7.62□□□□□ -1.19
GTF3C1-213ENST00000571886 DHRS2Q13268 280 aa7.62□□□□□ -1.19
GTF3C1-213ENST00000571886 LYG2Q86SG7 212 aa7.62□□□□□ -1.19
GTF3C1-213ENST00000571886 GBGT1Q8N5D6 347 aa7.62□□□□□ -1.19
GTF3C1-213ENST00000571886 RNASEH2CQ8TDP1 164 aaKnown RBP7.62□□□□□ -1.19
GTF3C1-213ENST00000571886 NPIPB3Q92617 1050 aa7.62□□□□□ -1.19
GTF3C1-213ENST00000571886 SPAG8Q99932 426 aaPredicted RBP7.62□□□□□ -1.19
GTF3C1-213ENST00000571886 C7orf50Q9BRJ6 194 aaKnown RBP7.62□□□□□ -1.19
GTF3C1-213ENST00000571886 VSIRQ9H7M9 311 aa7.62□□□□□ -1.19
GTF3C1-213ENST00000571886 TMED3Q9Y3Q3 217 aa7.62□□□□□ -1.19
GTF3C1-213ENST00000571886 U3KQ87 197 aa7.62□□□□□ -1.19
GTF3C1-213ENST00000571886 KMT2CQ8NEZ4 4911 aaKnown RBP7.61□□□□□ -1.19
GTF3C1-213ENST00000571886 RPS10-NUDT3A0A1W2PQS6 291 aa7.61□□□□□ -1.19
GTF3C1-213ENST00000571886 LYRM1O43325 122 aa7.61□□□□□ -1.19
GTF3C1-213ENST00000571886 SLC25A6P12236 298 aa7.61□□□□□ -1.19
GTF3C1-213ENST00000571886 TFPI2P48307 235 aa7.61□□□□□ -1.19
GTF3C1-213ENST00000571886 ZNF124Q15973 351 aa7.61□□□□□ -1.19
GTF3C1-213ENST00000571886 ODF3L2Q3SX64 289 aa7.61□□□□□ -1.19
GTF3C1-213ENST00000571886 SLC16A13Q7RTY0 426 aa7.61□□□□□ -1.19
GTF3C1-213ENST00000571886 ACY3Q96HD9 319 aa7.61□□□□□ -1.19
GTF3C1-213ENST00000571886 FAM110AQ9BQ89 295 aa7.61□□□□□ -1.19
GTF3C1-213ENST00000571886 ZMAT4Q9H898 229 aa7.61□□□□□ -1.19
GTF3C1-213ENST00000571886 TBC1D24Q9ULP9 559 aa7.61□□□□□ -1.19
GTF3C1-213ENST00000571886 IGKV1D-37A0A075B6S9 117 aa7.6□□□□□ -1.19
GTF3C1-213ENST00000571886 CENPXA8MT69 81 aa7.6□□□□□ -1.19
GTF3C1-213ENST00000571886 WRBO00258 174 aa7.6□□□□□ -1.19
GTF3C1-213ENST00000571886 DFFBO76075 338 aa7.6□□□□□ -1.19
GTF3C1-213ENST00000571886 TCRBP04435 133 aa7.6□□□□□ -1.19
GTF3C1-213ENST00000571886 IFNA4P05014 189 aa7.6□□□□□ -1.19
GTF3C1-213ENST00000571886 SLC25A4P12235 298 aa7.6□□□□□ -1.19
GTF3C1-213ENST00000571886 OR10J1P30954 320 aa7.6□□□□□ -1.19
GTF3C1-213ENST00000571886 BCAP31P51572 246 aa7.6□□□□□ -1.19
GTF3C1-213ENST00000571886 IFITM3Q01628 133 aa7.6□□□□□ -1.19
GTF3C1-213ENST00000571886 GAMTQ14353 236 aa7.6□□□□□ -1.19
GTF3C1-213ENST00000571886 LAMTOR1Q6IAA8 161 aa7.6□□□□□ -1.19
GTF3C1-213ENST00000571886 TCF24Q7RTU0 167 aa7.6□□□□□ -1.19
GTF3C1-213ENST00000571886 WFDC3Q8IUB2 231 aa7.6□□□□□ -1.19
GTF3C1-213ENST00000571886 APRG1Q8IVJ8 170 aa7.6□□□□□ -1.19
GTF3C1-213ENST00000571886 FAM24BQ8N5W8 94 aa7.6□□□□□ -1.19
GTF3C1-213ENST00000571886 OR1S2Q8NGQ3 325 aa7.6□□□□□ -1.19
GTF3C1-213ENST00000571886 C20orf85Q9H1P6 137 aa7.6□□□□□ -1.19
GTF3C1-213ENST00000571886 CACFD1Q9UGQ2 172 aa7.6□□□□□ -1.19
GTF3C1-213ENST00000571886 U3KQE9 123 aa7.6□□□□□ -1.19
GTF3C1-213ENST00000571886 TRAV6A0A075B6T7 132 aa7.59□□□□□ -1.19
GTF3C1-213ENST00000571886 TRAV30A0A087WSZ9 112 aa7.59□□□□□ -1.19
GTF3C1-213ENST00000571886 FAM90A26D6RGX4 464 aa7.59□□□□□ -1.19
GTF3C1-213ENST00000571886 SYNGR2O43760 224 aa7.59□□□□□ -1.19
GTF3C1-213ENST00000571886 NPPCP23582 126 aa7.59□□□□□ -1.19
GTF3C1-213ENST00000571886 CRYBB3P26998 211 aa7.59□□□□□ -1.19
GTF3C1-213ENST00000571886 YPEL3P61236 119 aaPredicted RBP7.59□□□□□ -1.19
GTF3C1-213ENST00000571886 POLR2GP62487 172 aaKnown RBP eCLIP7.59□□□□□ -1.19
GTF3C1-213ENST00000571886 ID3Q02535 119 aa7.59□□□□□ -1.19
GTF3C1-213ENST00000571886 USF2Q15853 346 aaPredicted RBP7.59□□□□□ -1.19
GTF3C1-213ENST00000571886 C4orf46Q504U0 113 aa7.59□□□□□ -1.19
GTF3C1-213ENST00000571886 ETFRF1Q6IPR1 90 aa7.59□□□□□ -1.19
GTF3C1-213ENST00000571886 OR4D5Q8NGN0 318 aa7.59□□□□□ -1.19
GTF3C1-213ENST00000571886 COQ8AQ8NI60 647 aa7.59□□□□□ -1.19
GTF3C1-213ENST00000571886 SPATA25Q9BR10 227 aa7.59□□□□□ -1.19
GTF3C1-213ENST00000571886 SEC22CQ9BRL7 303 aa7.59□□□□□ -1.19
GTF3C1-213ENST00000571886 GINS3Q9BRX5 216 aa7.59□□□□□ -1.19
GTF3C1-213ENST00000571886 CCDC32Q9BV29 185 aa7.59□□□□□ -1.19
GTF3C1-213ENST00000571886 PAIP2BQ9ULR5 123 aaKnown RBP7.59□□□□□ -1.19
GTF3C1-213ENST00000571886 AGRNO00468 2067 aa7.59□□□□□ -1.19
GTF3C1-213ENST00000571886 NBEAL2Q6ZNJ1 2754 aa7.58□□□□□ -1.2
GTF3C1-213ENST00000571886 IGKV1OR2-108A0A075B7D4 117 aa7.58□□□□□ -1.2
GTF3C1-213ENST00000571886 PRSS46E5RG02 174 aa7.58□□□□□ -1.2
GTF3C1-213ENST00000571886 H3BP45 60 aa7.58□□□□□ -1.2
GTF3C1-213ENST00000571886 CCSO14618 274 aa7.58□□□□□ -1.2
GTF3C1-213ENST00000571886 UPK1BO75841 260 aa7.58□□□□□ -1.2
GTF3C1-213ENST00000571886 CCNKO75909 580 aa7.58□□□□□ -1.2
GTF3C1-213ENST00000571886 TOMM40O96008 361 aa7.58□□□□□ -1.2
GTF3C1-213ENST00000571886 PSG1P11464 419 aa7.58□□□□□ -1.2
GTF3C1-213ENST00000571886 GPX4P36969 197 aaPredicted RBP7.58□□□□□ -1.2
GTF3C1-213ENST00000571886 PAX9P55771 341 aa7.58□□□□□ -1.2
GTF3C1-213ENST00000571886 ZNF90Q03938 601 aa7.58□□□□□ -1.2
GTF3C1-213ENST00000571886 SPANXN5Q5MJ07 72 aa7.58□□□□□ -1.2
GTF3C1-213ENST00000571886 NOXA1Q86UR1 476 aa7.58□□□□□ -1.2
GTF3C1-213ENST00000571886 Q8WTZ3 238 aa7.58□□□□□ -1.2
GTF3C1-213ENST00000571886 MITD1Q8WV92 249 aa7.58□□□□□ -1.2
GTF3C1-213ENST00000571886 METTL26Q96S19 204 aa7.58□□□□□ -1.2
GTF3C1-213ENST00000571886 MS4A6AQ9H2W1 248 aa7.58□□□□□ -1.2
GTF3C1-213ENST00000571886 EDA2RQ9HAV5 297 aa7.58□□□□□ -1.2
GTF3C1-213ENST00000571886 LOC102724200A0A096LPH7 203 aaPredicted RBP7.57□□□□□ -1.2
GTF3C1-213ENST00000571886 PIGBOS1A0A0B4J2F0 54 aa7.57□□□□□ -1.2
GTF3C1-213ENST00000571886 OR4C46A6NHA9 309 aa7.57□□□□□ -1.2
GTF3C1-213ENST00000571886 PMS2P5A8MQ11 134 aa7.57□□□□□ -1.2
GTF3C1-213ENST00000571886 MED6O75586 246 aa7.57□□□□□ -1.2
GTF3C1-213ENST00000571886 IL4P05112 153 aa7.57□□□□□ -1.2
GTF3C1-213ENST00000571886 HNRNPCP07910 306 aaKnown RBP eCLIP7.57□□□□□ -1.2
GTF3C1-213ENST00000571886 RD3LP0DJH9 198 aa7.57□□□□□ -1.2
GTF3C1-213ENST00000571886 RPL35AP18077 110 aaKnown RBP7.57□□□□□ -1.2
GTF3C1-213ENST00000571886 P2RY1P47900 373 aa7.57□□□□□ -1.2
GTF3C1-213ENST00000571886 GSG1LQ6UXU4 331 aa7.57□□□□□ -1.2
GTF3C1-213ENST00000571886 TMEM182Q6ZP80 229 aaPredicted RBP7.57□□□□□ -1.2
GTF3C1-213ENST00000571886 STPG3Q8N7X2 389 aa7.57□□□□□ -1.2
GTF3C1-213ENST00000571886 ZBTB8BQ8NAP8 495 aaPredicted RBP7.57□□□□□ -1.2
GTF3C1-213ENST00000571886 OR51G1Q8NGK1 321 aa7.57□□□□□ -1.2
GTF3C1-213ENST00000571886 GGTLC1Q9BX51 225 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms