RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 C3orf85A0A1B0GTC6 90 aa8.6□□□□□ -1.03
CAPN3-220ENST00000569827 H3BMM0 161 aa8.6□□□□□ -1.03
CAPN3-220ENST00000569827 CORTO00230 105 aa8.6□□□□□ -1.03
CAPN3-220ENST00000569827 HPGDSO60760 199 aa8.6□□□□□ -1.03
CAPN3-220ENST00000569827 ATP6V1G2O95670 118 aa8.6□□□□□ -1.03
CAPN3-220ENST00000569827 IL4P05112 153 aa8.6□□□□□ -1.03
CAPN3-220ENST00000569827 ELK1P19419 428 aa8.6□□□□□ -1.03
CAPN3-220ENST00000569827 OR10J1P30954 320 aa8.6□□□□□ -1.03
CAPN3-220ENST00000569827 LGALS9BQ3B8N2 356 aa8.6□□□□□ -1.03
CAPN3-220ENST00000569827 PRSS54Q6PEW0 395 aa8.6□□□□□ -1.03
CAPN3-220ENST00000569827 Q6ZR54 194 aa8.6□□□□□ -1.03
CAPN3-220ENST00000569827 CROCCP3Q8IVE0 287 aa8.6□□□□□ -1.03
CAPN3-220ENST00000569827 OR4D10Q8NGI6 311 aa8.6□□□□□ -1.03
CAPN3-220ENST00000569827 TMEM170AQ8WVE7 144 aa8.6□□□□□ -1.03
CAPN3-220ENST00000569827 KLK11Q9UBX7 282 aa8.6□□□□□ -1.03
CAPN3-220ENST00000569827 INS-IGF2F8WCM5 200 aa8.59□□□□□ -1.03
CAPN3-220ENST00000569827 NPY1RP25929 384 aa8.59□□□□□ -1.03
CAPN3-220ENST00000569827 EIF2B2P49770 351 aaKnown RBP8.59□□□□□ -1.03
CAPN3-220ENST00000569827 RND3P61587 244 aa8.59□□□□□ -1.03
CAPN3-220ENST00000569827 NCS1P62166 190 aa8.59□□□□□ -1.03
CAPN3-220ENST00000569827 MEF2DQ14814 521 aa8.59□□□□□ -1.03
CAPN3-220ENST00000569827 BSXQ3C1V8 233 aa8.59□□□□□ -1.03
CAPN3-220ENST00000569827 FAM222AQ5U5X8 452 aa8.59□□□□□ -1.03
CAPN3-220ENST00000569827 SIGLEC15Q6ZMC9 328 aa8.59□□□□□ -1.03
CAPN3-220ENST00000569827 LHFPL1Q86WI0 220 aa8.59□□□□□ -1.03
CAPN3-220ENST00000569827 OR1S2Q8NGQ3 325 aa8.59□□□□□ -1.03
CAPN3-220ENST00000569827 LHFPL5Q8TAF8 219 aa8.59□□□□□ -1.03
CAPN3-220ENST00000569827 YIPF6Q96EC8 236 aa8.59□□□□□ -1.03
CAPN3-220ENST00000569827 ACY3Q96HD9 319 aa8.59□□□□□ -1.03
CAPN3-220ENST00000569827 YTHDF1Q9BYJ9 559 aaKnown RBP8.59□□□□□ -1.03
CAPN3-220ENST00000569827 WDR12Q9GZL7 423 aaKnown RBP8.59□□□□□ -1.03
CAPN3-220ENST00000569827 SLC35B3Q9H1N7 401 aa8.59□□□□□ -1.03
CAPN3-220ENST00000569827 Q9H521 79 aa8.59□□□□□ -1.03
CAPN3-220ENST00000569827 F6UB75 175 aa8.58□□□□□ -1.04
CAPN3-220ENST00000569827 IFNA21P01568 189 aa8.58□□□□□ -1.04
CAPN3-220ENST00000569827 CD74P04233 296 aa8.58□□□□□ -1.04
CAPN3-220ENST00000569827 CD3DP04234 171 aa8.58□□□□□ -1.04
CAPN3-220ENST00000569827 HLA-DRB4P13762 266 aa8.58□□□□□ -1.04
CAPN3-220ENST00000569827 RPL5P46777 297 aaKnown RBP8.58□□□□□ -1.04
CAPN3-220ENST00000569827 SNRPD3P62318 126 aaKnown RBP8.58□□□□□ -1.04
CAPN3-220ENST00000569827 RNASE10Q5GAN6 216 aaKnown RBP8.58□□□□□ -1.04
CAPN3-220ENST00000569827 FAAP20Q6NZ36 180 aa8.58□□□□□ -1.04
CAPN3-220ENST00000569827 ZNF705AQ6ZN79 300 aaPredicted RBP8.58□□□□□ -1.04
CAPN3-220ENST00000569827 OR51G1Q8NGK1 321 aa8.58□□□□□ -1.04
CAPN3-220ENST00000569827 OR13C8Q8NGS7 320 aa8.58□□□□□ -1.04
CAPN3-220ENST00000569827 OR52I2Q8NH67 350 aa8.58□□□□□ -1.04
CAPN3-220ENST00000569827 MARCH1Q8TCQ1 289 aa8.58□□□□□ -1.04
CAPN3-220ENST00000569827 Q8WTZ3 238 aa8.58□□□□□ -1.04
CAPN3-220ENST00000569827 NPIPB3Q92617 1050 aa8.58□□□□□ -1.04
CAPN3-220ENST00000569827 RRNAD1Q96FB5 475 aaKnown RBP8.58□□□□□ -1.04
CAPN3-220ENST00000569827 LINC00052Q96N35 136 aa8.58□□□□□ -1.04
CAPN3-220ENST00000569827 C1QTNF4Q9BXJ3 329 aa8.58□□□□□ -1.04
CAPN3-220ENST00000569827 SCPEP1Q9HB40 452 aa8.58□□□□□ -1.04
CAPN3-220ENST00000569827 NRN1Q9NPD7 142 aa8.58□□□□□ -1.04
CAPN3-220ENST00000569827 HEYLQ9NQ87 328 aaPredicted RBP8.58□□□□□ -1.04
CAPN3-220ENST00000569827 PRR13Q9NZ81 148 aa8.58□□□□□ -1.04
CAPN3-220ENST00000569827 COPZ2Q9P299 210 aa8.58□□□□□ -1.04
CAPN3-220ENST00000569827 HLA-DRB4X5D2U9 266 aa8.58□□□□□ -1.04
CAPN3-220ENST00000569827 TRAV30A0A087WSZ9 112 aa8.57□□□□□ -1.04
CAPN3-220ENST00000569827 SMIM31A0A1B0GVY4 71 aa8.57□□□□□ -1.04
CAPN3-220ENST00000569827 ZNF705FA8MVS1 300 aaPredicted RBP8.57□□□□□ -1.04
CAPN3-220ENST00000569827 BUB3O43684 328 aa8.57□□□□□ -1.04
CAPN3-220ENST00000569827 TMEM127O75204 238 aa8.57□□□□□ -1.04
CAPN3-220ENST00000569827 SCGB2A1O75556 95 aa8.57□□□□□ -1.04
CAPN3-220ENST00000569827 APOA1P02647 267 aa8.57□□□□□ -1.04
CAPN3-220ENST00000569827 PRM2P04554 102 aa8.57□□□□□ -1.04
CAPN3-220ENST00000569827 OR5AC1P0C628 307 aa8.57□□□□□ -1.04
CAPN3-220ENST00000569827 ZNF705DP0CH99 300 aaPredicted RBP8.57□□□□□ -1.04
CAPN3-220ENST00000569827 ZNF705BP0CI00 300 aaPredicted RBP8.57□□□□□ -1.04
CAPN3-220ENST00000569827 SPART-AS1P0CW21 52 aa8.57□□□□□ -1.04
CAPN3-220ENST00000569827 VBP1P61758 197 aa8.57□□□□□ -1.04
CAPN3-220ENST00000569827 NUTF2P61970 127 aaKnown RBP8.57□□□□□ -1.04
CAPN3-220ENST00000569827 SCGB2B2Q4G0G5 96 aa8.57□□□□□ -1.04
CAPN3-220ENST00000569827 KCTD21Q4G0X4 260 aa8.57□□□□□ -1.04
CAPN3-220ENST00000569827 TMEM88Q6PEY1 159 aa8.57□□□□□ -1.04
CAPN3-220ENST00000569827 OR4B1Q8NGF8 309 aa8.57□□□□□ -1.04
CAPN3-220ENST00000569827 PBDC1Q9BVG4 233 aa8.57□□□□□ -1.04
CAPN3-220ENST00000569827 DKK2Q9UBU2 259 aa8.57□□□□□ -1.04
CAPN3-220ENST00000569827 CACNG5Q9UF02 275 aa8.57□□□□□ -1.04
CAPN3-220ENST00000569827 RPS10-NUDT3A0A1W2PQS6 291 aa8.56□□□□□ -1.04
CAPN3-220ENST00000569827 CEBPZOSA8MTT3 80 aa8.56□□□□□ -1.04
CAPN3-220ENST00000569827 FAM25AB3EWG3 89 aa8.56□□□□□ -1.04
CAPN3-220ENST00000569827 FAM25CB3EWG5 89 aa8.56□□□□□ -1.04
CAPN3-220ENST00000569827 FAM25GB3EWG6 89 aa8.56□□□□□ -1.04
CAPN3-220ENST00000569827 UCP1P25874 307 aa8.56□□□□□ -1.04
CAPN3-220ENST00000569827 SPCS3P61009 180 aa8.56□□□□□ -1.04
CAPN3-220ENST00000569827 YPEL3P61236 119 aaPredicted RBP8.56□□□□□ -1.04
CAPN3-220ENST00000569827 TNP2Q05952 138 aa8.56□□□□□ -1.04
CAPN3-220ENST00000569827 ZNF709Q8N972 641 aa8.56□□□□□ -1.04
CAPN3-220ENST00000569827 SLC24A4Q8NFF2 622 aa8.56□□□□□ -1.04
CAPN3-220ENST00000569827 GPR146Q96CH1 333 aa8.56□□□□□ -1.04
CAPN3-220ENST00000569827 ZNF486Q96H40 463 aaPredicted RBP8.56□□□□□ -1.04
CAPN3-220ENST00000569827 NIPSNAP3BQ9BS92 247 aa8.56□□□□□ -1.04
CAPN3-220ENST00000569827 RFNGQ9Y644 331 aa8.56□□□□□ -1.04
CAPN3-220ENST00000569827 TOMM40O96008 361 aa8.55□□□□□ -1.04
CAPN3-220ENST00000569827 PSG1P11464 419 aa8.55□□□□□ -1.04
CAPN3-220ENST00000569827 HTR2BP41595 481 aa8.55□□□□□ -1.04
CAPN3-220ENST00000569827 RORCP51449 518 aa8.55□□□□□ -1.04
CAPN3-220ENST00000569827 AP2S1P53680 142 aaPredicted RBP8.55□□□□□ -1.04
CAPN3-220ENST00000569827 C2orf83Q53S99 150 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms