RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 OR4C16Q8NGL9 310 aa6.05□□□□□ -1.44
SMG1-216ENST00000569122 OR6F1Q8NGZ6 308 aa6.05□□□□□ -1.44
SMG1-216ENST00000569122 GLMPQ8WWB7 406 aa6.05□□□□□ -1.44
SMG1-216ENST00000569122 UPK3BQ9BT76 320 aa6.05□□□□□ -1.44
SMG1-216ENST00000569122 SAV1Q9H4B6 383 aaPredicted RBP6.05□□□□□ -1.44
SMG1-216ENST00000569122 VPS13BQ7Z7G8 4022 aa6.05□□□□□ -1.44
SMG1-216ENST00000569122 FAT1Q14517 4588 aa6.04□□□□□ -1.44
SMG1-216ENST00000569122 KRTAP29-1A8MX34 341 aaPredicted RBP6.04□□□□□ -1.44
SMG1-216ENST00000569122 INS-IGF2F8WCM5 200 aa6.04□□□□□ -1.44
SMG1-216ENST00000569122 IGKV3-20P01619 116 aa6.04□□□□□ -1.44
SMG1-216ENST00000569122 RLN1P04808 185 aa6.04□□□□□ -1.44
SMG1-216ENST00000569122 DEFB130BP0DP73 79 aa6.04□□□□□ -1.44
SMG1-216ENST00000569122 DEFB130AP0DP74 79 aa6.04□□□□□ -1.44
SMG1-216ENST00000569122 OPRK1P41145 380 aa6.04□□□□□ -1.44
SMG1-216ENST00000569122 FXYD7P58549 80 aa6.04□□□□□ -1.44
SMG1-216ENST00000569122 DLK1P80370 383 aa6.04□□□□□ -1.44
SMG1-216ENST00000569122 FABP5Q01469 135 aa6.04□□□□□ -1.44
SMG1-216ENST00000569122 OR5AP2Q8NGF4 316 aa6.04□□□□□ -1.44
SMG1-216ENST00000569122 OR1S2Q8NGQ3 325 aa6.04□□□□□ -1.44
SMG1-216ENST00000569122 LINC00052Q96N35 136 aa6.04□□□□□ -1.44
SMG1-216ENST00000569122 ABHD1Q96SE0 405 aa6.04□□□□□ -1.44
SMG1-216ENST00000569122 PDCD10Q9BUL8 212 aa6.04□□□□□ -1.44
SMG1-216ENST00000569122 FLG2Q5D862 2391 aaPredicted RBP6.04□□□□□ -1.44
SMG1-216ENST00000569122 DBX1A6NMT0 343 aa6.03□□□□□ -1.44
SMG1-216ENST00000569122 SSX5O60225 188 aa6.03□□□□□ -1.44
SMG1-216ENST00000569122 TSPOP30536 169 aa6.03□□□□□ -1.44
SMG1-216ENST00000569122 OR10A3P58181 314 aa6.03□□□□□ -1.44
SMG1-216ENST00000569122 YPEL3P61236 119 aaPredicted RBP6.03□□□□□ -1.44
SMG1-216ENST00000569122 LAIR2Q6ISS4 152 aa6.03□□□□□ -1.44
SMG1-216ENST00000569122 LPCAT3Q6P1A2 487 aa6.03□□□□□ -1.44
SMG1-216ENST00000569122 DHRS11Q6UWP2 260 aa6.03□□□□□ -1.44
SMG1-216ENST00000569122 NFE4Q86UQ8 179 aa6.03□□□□□ -1.44
SMG1-216ENST00000569122 C1orf158Q8N1D5 194 aa6.03□□□□□ -1.44
SMG1-216ENST00000569122 SLC35G3Q8N808 338 aa6.03□□□□□ -1.44
SMG1-216ENST00000569122 ZNF709Q8N972 641 aa6.03□□□□□ -1.44
SMG1-216ENST00000569122 COQ8AQ8NI60 647 aa6.03□□□□□ -1.44
SMG1-216ENST00000569122 IGF2BP2-AS1Q96M15 143 aa6.03□□□□□ -1.44
SMG1-216ENST00000569122 ENY2Q9NPA8 101 aa6.03□□□□□ -1.44
SMG1-216ENST00000569122 MDFICQ9P1T7 246 aa6.03□□□□□ -1.44
SMG1-216ENST00000569122 NACAE9PAV3 2078 aa6.02□□□□□ -1.45
SMG1-216ENST00000569122 A0A0A6YYH2 397 aa6.02□□□□□ -1.45
SMG1-216ENST00000569122 A6NJ64 397 aa6.02□□□□□ -1.45
SMG1-216ENST00000569122 GPR31O00270 319 aa6.02□□□□□ -1.45
SMG1-216ENST00000569122 BUB3O43684 328 aa6.02□□□□□ -1.45
SMG1-216ENST00000569122 ADAP1O75689 374 aa6.02□□□□□ -1.45
SMG1-216ENST00000569122 ATG12O94817 140 aa6.02□□□□□ -1.45
SMG1-216ENST00000569122 IGKV1-17P01599 117 aa6.02□□□□□ -1.45
SMG1-216ENST00000569122 SMR3BP02814 79 aaPredicted RBP6.02□□□□□ -1.45
SMG1-216ENST00000569122 PSMB9P28065 219 aa6.02□□□□□ -1.45
SMG1-216ENST00000569122 PSMB3P49720 205 aa6.02□□□□□ -1.45
SMG1-216ENST00000569122 PAX9P55771 341 aa6.02□□□□□ -1.45
SMG1-216ENST00000569122 OR10J6PQ8NGY7 276 aa6.02□□□□□ -1.45
SMG1-216ENST00000569122 RNF141Q8WVD5 230 aa6.02□□□□□ -1.45
SMG1-216ENST00000569122 GNPNAT1Q96EK6 184 aaPredicted RBP6.02□□□□□ -1.45
SMG1-216ENST00000569122 MGLLQ99685 303 aa6.02□□□□□ -1.45
SMG1-216ENST00000569122 DIABLOQ9NR28 239 aa6.02□□□□□ -1.45
SMG1-216ENST00000569122 ZNF586Q9NXT0 402 aa6.02□□□□□ -1.45
SMG1-216ENST00000569122 KLK11Q9UBX7 282 aa6.02□□□□□ -1.45
SMG1-216ENST00000569122 TPRKBQ9Y3C4 175 aa6.02□□□□□ -1.45
SMG1-216ENST00000569122 NOTOA8MTQ0 251 aa6.01□□□□□ -1.45
SMG1-216ENST00000569122 PLA2G1BP04054 148 aaKnown RBP6.01□□□□□ -1.45
SMG1-216ENST00000569122 GNAO1P09471 354 aa6.01□□□□□ -1.45
SMG1-216ENST00000569122 SLC25A4P12235 298 aa6.01□□□□□ -1.45
SMG1-216ENST00000569122 M6PRP20645 277 aa6.01□□□□□ -1.45
SMG1-216ENST00000569122 GCSHP23434 173 aa6.01□□□□□ -1.45
SMG1-216ENST00000569122 RORCP51449 518 aa6.01□□□□□ -1.45
SMG1-216ENST00000569122 SCAND1P57086 179 aa6.01□□□□□ -1.45
SMG1-216ENST00000569122 LINC00315P59091 139 aa6.01□□□□□ -1.45
SMG1-216ENST00000569122 ZNF79Q15937 498 aa6.01□□□□□ -1.45
SMG1-216ENST00000569122 TIGITQ495A1 244 aa6.01□□□□□ -1.45
SMG1-216ENST00000569122 GDF5OSQ5U4N7 250 aa6.01□□□□□ -1.45
SMG1-216ENST00000569122 FAM78BQ5VT40 261 aa6.01□□□□□ -1.45
SMG1-216ENST00000569122 ETFRF1Q6IPR1 90 aa6.01□□□□□ -1.45
SMG1-216ENST00000569122 SFXN4Q6P4A7 337 aa6.01□□□□□ -1.45
SMG1-216ENST00000569122 SLC24A4Q8NFF2 622 aa6.01□□□□□ -1.45
SMG1-216ENST00000569122 RXFP4Q8TDU9 374 aa6.01□□□□□ -1.45
SMG1-216ENST00000569122 SEC22AQ96IW7 307 aa6.01□□□□□ -1.45
SMG1-216ENST00000569122 KRTAP1-5Q9BYS1 174 aa6.01□□□□□ -1.45
SMG1-216ENST00000569122 SLC35B3Q9H1N7 401 aa6.01□□□□□ -1.45
SMG1-216ENST00000569122 EHFQ9NZC4 300 aa6.01□□□□□ -1.45
SMG1-216ENST00000569122 PLA2G2DQ9UNK4 145 aa6.01□□□□□ -1.45
SMG1-216ENST00000569122 RRP15Q9Y3B9 282 aaKnown RBP6.01□□□□□ -1.45
SMG1-216ENST00000569122 MRPS16Q9Y3D3 137 aaKnown RBP6.01□□□□□ -1.45
SMG1-216ENST00000569122 TRAV18A0A075B6X5 111 aa6□□□□□ -1.45
SMG1-216ENST00000569122 H3BNG1 76 aa6□□□□□ -1.45
SMG1-216ENST00000569122 ISLRO14498 428 aa6□□□□□ -1.45
SMG1-216ENST00000569122 INSP01308 110 aa6□□□□□ -1.45
SMG1-216ENST00000569122 IL4P05112 153 aa6□□□□□ -1.45
SMG1-216ENST00000569122 RD3LP0DJH9 198 aa6□□□□□ -1.45
SMG1-216ENST00000569122 PTHLHP12272 177 aa6□□□□□ -1.45
SMG1-216ENST00000569122 OR10J1P30954 320 aa6□□□□□ -1.45
SMG1-216ENST00000569122 DHODHQ02127 395 aa6□□□□□ -1.45
SMG1-216ENST00000569122 TBCEQ15813 527 aaPredicted RBP6□□□□□ -1.45
SMG1-216ENST00000569122 C1orf194Q5T5A4 169 aa6□□□□□ -1.45
SMG1-216ENST00000569122 IDNKQ5T6J7 187 aa6□□□□□ -1.45
SMG1-216ENST00000569122 GPR141Q7Z602 305 aa6□□□□□ -1.45
SMG1-216ENST00000569122 DEFB104AQ8WTQ1 72 aa6□□□□□ -1.45
SMG1-216ENST00000569122 ZNF2Q9BSG1 426 aaPredicted RBP6□□□□□ -1.45
SMG1-216ENST00000569122 FNDC4Q9H6D8 234 aaPredicted RBP6□□□□□ -1.45
SMG1-216ENST00000569122 IFT46Q9NQC8 304 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms