RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-215	ENST00000569001	TRBV6-5	A0A0K0K1A5	114 aa		0.63	□□□□□ -2.31
BBS4-215	ENST00000569001	C7orf71	A4D174	169 aa		0.63	□□□□□ -2.31
BBS4-215	ENST00000569001	OR2T1	O43869	369 aa		0.63	□□□□□ -2.31
BBS4-215	ENST00000569001	OR5F1	O95221	314 aa		0.63	□□□□□ -2.31
BBS4-215	ENST00000569001	SHBG	P04278	402 aa		0.63	□□□□□ -2.31
BBS4-215	ENST00000569001	OR4E1	P0C645	316 aa		0.63	□□□□□ -2.31
BBS4-215	ENST00000569001	BAALC-AS2	P0C853	105 aa		0.63	□□□□□ -2.31
BBS4-215	ENST00000569001	RNASE3	P12724	160 aa	Known RBP	0.63	□□□□□ -2.31
BBS4-215	ENST00000569001	S100A4	P26447	101 aa	Known RBP	0.63	□□□□□ -2.31
BBS4-215	ENST00000569001	CASP1	P29466	404 aa		0.63	□□□□□ -2.31
BBS4-215	ENST00000569001	ERP29	P30040	261 aa	Known RBP	0.63	□□□□□ -2.31
BBS4-215	ENST00000569001	RNASE4	P34096	147 aa	Known RBP	0.63	□□□□□ -2.31
BBS4-215	ENST00000569001	KRR1	Q13601	381 aa	Known RBP	0.63	□□□□□ -2.31
BBS4-215	ENST00000569001	PDE6H	Q13956	83 aa		0.63	□□□□□ -2.31
BBS4-215	ENST00000569001	ZNF846	Q147U1	533 aa		0.63	□□□□□ -2.31
BBS4-215	ENST00000569001	POU6F1	Q14863	301 aa		0.63	□□□□□ -2.31
BBS4-215	ENST00000569001	RHEB	Q15382	184 aa		0.63	□□□□□ -2.31
BBS4-215	ENST00000569001	C10orf55	Q5SWW7	151 aa		0.63	□□□□□ -2.31
BBS4-215	ENST00000569001	AAED1	Q7RTV5	226 aa		0.63	□□□□□ -2.31
BBS4-215	ENST00000569001	LYG2	Q86SG7	212 aa		0.63	□□□□□ -2.31
BBS4-215	ENST00000569001	RPS19BP1	Q86WX3	136 aa	Known RBP	0.63	□□□□□ -2.31
BBS4-215	ENST00000569001	CLVS1	Q8IUQ0	354 aa	Predicted RBP	0.63	□□□□□ -2.31
BBS4-215	ENST00000569001		Q96M85	177 aa		0.63	□□□□□ -2.31
BBS4-215	ENST00000569001	PRRT1	Q99946	306 aa		0.63	□□□□□ -2.31
BBS4-215	ENST00000569001	OSTC	Q9NRP0	149 aa		0.63	□□□□□ -2.31
BBS4-215	ENST00000569001	TAS2R4	Q9NYW5	299 aa		0.63	□□□□□ -2.31
BBS4-215	ENST00000569001	OPTC	Q9UBM4	332 aa		0.63	□□□□□ -2.31
BBS4-215	ENST00000569001	STOML2	Q9UJZ1	356 aa		0.63	□□□□□ -2.31
BBS4-215	ENST00000569001	PYCARD	Q9ULZ3	195 aa		0.63	□□□□□ -2.31
BBS4-215	ENST00000569001	HS3ST2	Q9Y278	367 aa		0.63	□□□□□ -2.31
BBS4-215	ENST00000569001	ANAPC1	Q9H1A4	1944 aa		0.63	□□□□□ -2.31
BBS4-215	ENST00000569001	SETD5	Q9C0A6	1442 aa		0.63	□□□□□ -2.31
BBS4-215	ENST00000569001	LAMB2	P55268	1798 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	ADGB	Q8N7X0	1667 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	MED12L	Q86YW9	2145 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	RP1L1	Q8IWN7	2480 aa	Predicted RBP	0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	NCAPD3	P42695	1498 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	ALPK2	Q86TB3	2170 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	INTS1	Q8N201	2190 aa	Known RBP	0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	SULT1B1	O43704	296 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	IFNA7	P01567	189 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	SPI1	P17947	270 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	SRI	P30626	198 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	S100A5	P33763	92 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	ATP5G3	P48201	142 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	EIF2B2	P49770	351 aa	Known RBP	0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	PIGP	P57054	158 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	BASP1	P80723	227 aa	Known RBP	0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	TSN	Q15631	228 aa	Known RBP	0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	RRN3P1	Q2M238	152 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	KHDC3L	Q587J8	217 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	LYRM7	Q5U5X0	104 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	DPPA3	Q6W0C5	159 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	TMED4	Q7Z7H5	227 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	PHF13	Q86YI8	300 aa	Predicted RBP	0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	BPIFA4P	Q86YQ2	179 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001		Q8N2B8	174 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	WFDC11	Q8NEX6	87 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	OR4E2	Q8NGC2	313 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	OR52R1	Q8NGF1	315 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	OR5A1	Q8NGJ0	315 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	OR13D1	Q8NGV5	346 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	OR10J5	Q8NHC4	309 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	CDC26	Q8NHZ8	85 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	SLC25A40	Q8TBP6	338 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	FAM172A	Q8WUF8	416 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	DGCR14	Q96DF8	476 aa	Known RBP	0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	SLAMF6	Q96DU3	332 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	HIST1H2BL	Q99880	126 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	PAIP2	Q9BPZ3	127 aa	Known RBP	0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	LINC00467	Q9BRT7	94 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	GINS4	Q9BRT9	223 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	C9orf16	Q9BUW7	83 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	CCDC94	Q9BW85	323 aa	Predicted RBP	0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	ENY2	Q9NPA8	101 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	FAM32A	Q9Y421	112 aa	Known RBP	0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	TRPM1	Q7Z4N2	1603 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	ADGRB2	O60241	1585 aa		0.62	□□□□□ -2.31
BBS4-215	ENST00000569001	RIMBP3C	A6NJZ7	1639 aa		0.61	□□□□□ -2.31
BBS4-215	ENST00000569001	RIMBP3B	A6NNM3	1639 aa		0.61	□□□□□ -2.31
BBS4-215	ENST00000569001	RIMBP3	Q9UFD9	1639 aa		0.61	□□□□□ -2.31
BBS4-215	ENST00000569001	IGKV1D-42	A0A075B6H8	117 aa		0.61	□□□□□ -2.31
BBS4-215	ENST00000569001		E5RI56	91 aa		0.61	□□□□□ -2.31
BBS4-215	ENST00000569001	AIP	O00170	330 aa		0.61	□□□□□ -2.31
BBS4-215	ENST00000569001	CYB5B	O43169	146 aa		0.61	□□□□□ -2.31
BBS4-215	ENST00000569001	GGCT	O75223	188 aa	Known RBP	0.61	□□□□□ -2.31
BBS4-215	ENST00000569001	CRP	P02741	224 aa		0.61	□□□□□ -2.31
BBS4-215	ENST00000569001	SMIM17	P0DL12	118 aa		0.61	□□□□□ -2.31
BBS4-215	ENST00000569001	CRYGA	P11844	174 aa		0.61	□□□□□ -2.31
BBS4-215	ENST00000569001	FKBP2	P26885	142 aa	Known RBP	0.61	□□□□□ -2.31
BBS4-215	ENST00000569001	DEFA1	P59665	94 aa		0.61	□□□□□ -2.31
BBS4-215	ENST00000569001	RHOG	P84095	191 aa		0.61	□□□□□ -2.31
BBS4-215	ENST00000569001	RPL19	P84098	196 aa	Known RBP	0.61	□□□□□ -2.31
BBS4-215	ENST00000569001	TAF1A	Q15573	450 aa	Predicted RBP	0.61	□□□□□ -2.31
BBS4-215	ENST00000569001	HACD4	Q5VWC8	232 aa		0.61	□□□□□ -2.31
BBS4-215	ENST00000569001	C22orf39	Q6P5X5	142 aa		0.61	□□□□□ -2.31
BBS4-215	ENST00000569001	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	0.61	□□□□□ -2.31
BBS4-215	ENST00000569001	C3orf56	Q8N813	242 aa		0.61	□□□□□ -2.31
BBS4-215	ENST00000569001	C12orf29	Q8N999	325 aa		0.61	□□□□□ -2.31
BBS4-215	ENST00000569001	OR8D4	Q8NGM9	314 aa		0.61	□□□□□ -2.31

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms