RNA–Protein interactions for RNA: ENST00000568329.5

CSK-211, Transcript of C-terminal Src kinase, human

TSL 5

Gene CSK, Length 1,552 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSK-211	ENST00000568329	RAB2A	P61019	212 aa		12.05	□□□□□ -0.48
CSK-211	ENST00000568329	RHOG	P84095	191 aa		12.05	□□□□□ -0.48
CSK-211	ENST00000568329	ZNF616	Q08AN1	781 aa		12.05	□□□□□ -0.48
CSK-211	ENST00000568329	PXDC1	Q5TGL8	231 aa		12.05	□□□□□ -0.48
CSK-211	ENST00000568329		Q8N2B8	174 aa		12.05	□□□□□ -0.48
CSK-211	ENST00000568329	JMJD8	Q96S16	334 aa		12.05	□□□□□ -0.48
CSK-211	ENST00000568329	RPRM	Q9NS64	109 aa		12.05	□□□□□ -0.48
CSK-211	ENST00000568329	SLC39A9	Q9NUM3	307 aa		12.05	□□□□□ -0.48
CSK-211	ENST00000568329	FN1	P02751	2386 aa	Known RBP	12.05	□□□□□ -0.48
CSK-211	ENST00000568329	TMEM89	A2RUT3	159 aa		12.05	□□□□□ -0.48
CSK-211	ENST00000568329	HBE1	P02100	147 aa		12.05	□□□□□ -0.48
CSK-211	ENST00000568329	MIC13	Q5XKP0	118 aa		12.05	□□□□□ -0.48
CSK-211	ENST00000568329		Q6ZS46	218 aa		12.05	□□□□□ -0.48
CSK-211	ENST00000568329	MRPL36	Q9P0J6	103 aa	Known RBP	12.05	□□□□□ -0.48
CSK-211	ENST00000568329	RFNG	Q9Y644	331 aa		12.05	□□□□□ -0.48
CSK-211	ENST00000568329	GNG7	O60262	68 aa		12.04	□□□□□ -0.48
CSK-211	ENST00000568329	NDUFB8	O95169	186 aa		12.04	□□□□□ -0.48
CSK-211	ENST00000568329	IGHV3-48	P01763	117 aa		12.04	□□□□□ -0.48
CSK-211	ENST00000568329	H2AFB1	P0C5Y9	115 aa		12.04	□□□□□ -0.48
CSK-211	ENST00000568329	IGLC1	P0CG04	106 aa		12.04	□□□□□ -0.48
CSK-211	ENST00000568329	C15orf32	Q32M92	178 aa		12.04	□□□□□ -0.48
CSK-211	ENST00000568329	OR10G4	Q8NGN3	311 aa		12.04	□□□□□ -0.48
CSK-211	ENST00000568329	OR10G9	Q8NGN4	311 aa		12.04	□□□□□ -0.48
CSK-211	ENST00000568329	OR10G7	Q8NGN6	311 aa		12.04	□□□□□ -0.48
CSK-211	ENST00000568329	LYPD6B	Q8NI32	183 aa		12.04	□□□□□ -0.48
CSK-211	ENST00000568329	PCNP	Q8WW12	178 aa	Known RBP	12.04	□□□□□ -0.48
CSK-211	ENST00000568329	USMG5	Q96IX5	58 aa		12.04	□□□□□ -0.48
CSK-211	ENST00000568329	ACTR3C	Q9C0K3	210 aa	Predicted RBP	12.04	□□□□□ -0.48
CSK-211	ENST00000568329	ZNF702P	Q9H963	129 aa		12.04	□□□□□ -0.48
CSK-211	ENST00000568329	IGKV1D-37	A0A075B6S9	117 aa		12.03	□□□□□ -0.48
CSK-211	ENST00000568329	TRBV7-1	A0A0A6YYK4	115 aa		12.03	□□□□□ -0.48
CSK-211	ENST00000568329	IGHV3-21	A0A0B4J1V1	117 aa		12.03	□□□□□ -0.48
CSK-211	ENST00000568329	FHIT	P49789	147 aa		12.03	□□□□□ -0.48
CSK-211	ENST00000568329	SLC35B1	P78383	322 aa		12.03	□□□□□ -0.48
CSK-211	ENST00000568329	CFHR3	Q02985	330 aa		12.03	□□□□□ -0.48
CSK-211	ENST00000568329	COMMD1	Q8N668	190 aa		12.03	□□□□□ -0.48
CSK-211	ENST00000568329	BPIFC	Q8NFQ6	507 aa		12.03	□□□□□ -0.48
CSK-211	ENST00000568329	EEF1AKMT3	Q96AZ1	226 aa		12.03	□□□□□ -0.48
CSK-211	ENST00000568329	NOL4L	Q96MY1	436 aa	Predicted RBP	12.03	□□□□□ -0.48
CSK-211	ENST00000568329	PFDN5	Q99471	154 aa		12.03	□□□□□ -0.48
CSK-211	ENST00000568329	RNF2	Q99496	336 aa		12.03	□□□□□ -0.48
CSK-211	ENST00000568329	LINC00527	Q9UJ94	153 aa		12.03	□□□□□ -0.48
CSK-211	ENST00000568329	TRAV1-1	A0A0B4J248	108 aa		12.02	□□□□□ -0.49
CSK-211	ENST00000568329	CTXND1	A0A1B0GTU2	59 aa		12.02	□□□□□ -0.49
CSK-211	ENST00000568329	FAM181B	A6NEQ2	426 aa		12.02	□□□□□ -0.49
CSK-211	ENST00000568329	MFSD2B	A6NFX1	497 aa		12.02	□□□□□ -0.49
CSK-211	ENST00000568329	SEC14L6	B5MCN3	397 aa		12.02	□□□□□ -0.49
CSK-211	ENST00000568329	IGLV1-40	P01703	118 aa		12.02	□□□□□ -0.49
CSK-211	ENST00000568329	TRGV3	P03979	118 aa		12.02	□□□□□ -0.49
CSK-211	ENST00000568329	LINC00869	P0C866	280 aa		12.02	□□□□□ -0.49
CSK-211	ENST00000568329	ATP5G2	Q06055	141 aa		12.02	□□□□□ -0.49
CSK-211	ENST00000568329		Q56UQ5	140 aa		12.02	□□□□□ -0.49
CSK-211	ENST00000568329	FAM209B	Q5JX69	171 aa		12.02	□□□□□ -0.49
CSK-211	ENST00000568329	IL34	Q6ZMJ4	242 aa		12.02	□□□□□ -0.49
CSK-211	ENST00000568329	RPP25L	Q8N5L8	163 aa	Known RBP	12.02	□□□□□ -0.49
CSK-211	ENST00000568329	OR1L4	Q8NGR5	311 aa		12.02	□□□□□ -0.49
CSK-211	ENST00000568329	RCC1L	Q96I51	464 aa	Known RBP	12.02	□□□□□ -0.49
CSK-211	ENST00000568329		A0A0G2JLM5	398 aa		12.01	□□□□□ -0.49
CSK-211	ENST00000568329		A0A1W2PPV4	95 aa		12.01	□□□□□ -0.49
CSK-211	ENST00000568329	TCF21	O43680	179 aa		12.01	□□□□□ -0.49
CSK-211	ENST00000568329	YIF1A	O95070	293 aa		12.01	□□□□□ -0.49
CSK-211	ENST00000568329	IGHG4	P01861	327 aa		12.01	□□□□□ -0.49
CSK-211	ENST00000568329	CDC34	P49427	236 aa	Predicted RBP	12.01	□□□□□ -0.49
CSK-211	ENST00000568329	YPEL3	P61236	119 aa	Predicted RBP	12.01	□□□□□ -0.49
CSK-211	ENST00000568329	RHOB	P62745	196 aa		12.01	□□□□□ -0.49
CSK-211	ENST00000568329	ZNF502	Q8TBZ5	544 aa		12.01	□□□□□ -0.49
CSK-211	ENST00000568329	GATAD1	Q8WUU5	269 aa		12.01	□□□□□ -0.49
CSK-211	ENST00000568329	MBD3L1	Q8WWY6	194 aa		12.01	□□□□□ -0.49
CSK-211	ENST00000568329	HRH4	Q9H3N8	390 aa		12.01	□□□□□ -0.49
CSK-211	ENST00000568329	VSIR	Q9H7M9	311 aa		12.01	□□□□□ -0.49
CSK-211	ENST00000568329	CUBN	O60494	3623 aa		12.01	□□□□□ -0.49
CSK-211	ENST00000568329	ELOA3C	A0A087WX78	387 aa	Predicted RBP	12.01	□□□□□ -0.49
CSK-211	ENST00000568329	NUPL2	O15504	423 aa	Known RBP	12.01	□□□□□ -0.49
CSK-211	ENST00000568329	CRYBA1	P05813	215 aa		12.01	□□□□□ -0.49
CSK-211	ENST00000568329	TPPP2	P59282	170 aa		12.01	□□□□□ -0.49
CSK-211	ENST00000568329	ZNF90	Q03938	601 aa		12.01	□□□□□ -0.49
CSK-211	ENST00000568329	SFT2D1	Q8WV19	159 aa		12.01	□□□□□ -0.49
CSK-211	ENST00000568329	MS4A10	Q96PG2	267 aa		12.01	□□□□□ -0.49
CSK-211	ENST00000568329	MAST4	O15021	2626 aa		12	□□□□□ -0.49
CSK-211	ENST00000568329	TOMM40	O96008	361 aa		12	□□□□□ -0.49
CSK-211	ENST00000568329	IGKV1-17	P01599	117 aa		12	□□□□□ -0.49
CSK-211	ENST00000568329	RD3L	P0DJH9	198 aa		12	□□□□□ -0.49
CSK-211	ENST00000568329	PF4V1	P10720	104 aa		12	□□□□□ -0.49
CSK-211	ENST00000568329	PLP1	P60201	277 aa		12	□□□□□ -0.49
CSK-211	ENST00000568329	TMEM95	Q3KNT9	176 aa		12	□□□□□ -0.49
CSK-211	ENST00000568329	FAM122C	Q6P4D5	195 aa		12	□□□□□ -0.49
CSK-211	ENST00000568329	TEX38	Q6PEX7	206 aa		12	□□□□□ -0.49
CSK-211	ENST00000568329	S100A7A	Q86SG5	101 aa		12	□□□□□ -0.49
CSK-211	ENST00000568329	COMMD7	Q86VX2	200 aa		12	□□□□□ -0.49
CSK-211	ENST00000568329	MARC2	Q969Z3	335 aa		12	□□□□□ -0.49
CSK-211	ENST00000568329	MRPL32	Q9BYC8	188 aa	Known RBP	12	□□□□□ -0.49
CSK-211	ENST00000568329	RAB19	A4D1S5	217 aa		11.99	□□□□□ -0.49
CSK-211	ENST00000568329	MAP1LC3B2	A6NCE7	125 aa		11.99	□□□□□ -0.49
CSK-211	ENST00000568329	ELANE	P08246	267 aa		11.99	□□□□□ -0.49
CSK-211	ENST00000568329	SPSB3	Q6PJ21	355 aa		11.99	□□□□□ -0.49
CSK-211	ENST00000568329	OR51G1	Q8NGK1	321 aa		11.99	□□□□□ -0.49
CSK-211	ENST00000568329	RAB24	Q969Q5	203 aa		11.99	□□□□□ -0.49
CSK-211	ENST00000568329	MAP1LC3B	Q9GZQ8	125 aa		11.99	□□□□□ -0.49
CSK-211	ENST00000568329	DNAJC4	Q9NNZ3	241 aa		11.99	□□□□□ -0.49
CSK-211	ENST00000568329	PSMB11	A5LHX3	300 aa		11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms