RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 ARPC1AQ92747 370 aa11.58□□□□□ -0.56
COMMD4-221ENST00000567935 MISP3Q96FF7 219 aa11.58□□□□□ -0.56
COMMD4-221ENST00000567935 ACY3Q96HD9 319 aa11.58□□□□□ -0.56
COMMD4-221ENST00000567935 RARRES2Q99969 163 aa11.58□□□□□ -0.56
COMMD4-221ENST00000567935 MRPL32Q9BYC8 188 aaKnown RBP11.58□□□□□ -0.56
COMMD4-221ENST00000567935 MEGF9Q9H1U4 602 aa11.58□□□□□ -0.56
COMMD4-221ENST00000567935 FNDC4Q9H6D8 234 aaPredicted RBP11.58□□□□□ -0.56
COMMD4-221ENST00000567935 TCRBV4S1A1TA0A5B7 111 aa11.57□□□□□ -0.56
COMMD4-221ENST00000567935 ZFP92A6NM28 416 aa11.57□□□□□ -0.56
COMMD4-221ENST00000567935 STAG3L2P0CL84 134 aa11.57□□□□□ -0.56
COMMD4-221ENST00000567935 STAG3L3P0CL85 134 aa11.57□□□□□ -0.56
COMMD4-221ENST00000567935 SRD5A1P18405 259 aa11.57□□□□□ -0.56
COMMD4-221ENST00000567935 TAS2R45P59539 299 aa11.57□□□□□ -0.56
COMMD4-221ENST00000567935 GUCA2BQ16661 112 aa11.57□□□□□ -0.56
COMMD4-221ENST00000567935 PIP4P2Q8N4L2 257 aa11.57□□□□□ -0.56
COMMD4-221ENST00000567935 OR1L4Q8NGR5 311 aa11.57□□□□□ -0.56
COMMD4-221ENST00000567935 RXFP4Q8TDU9 374 aa11.57□□□□□ -0.56
COMMD4-221ENST00000567935 GATAD1Q8WUU5 269 aa11.57□□□□□ -0.56
COMMD4-221ENST00000567935 C17orf50Q8WW18 174 aa11.57□□□□□ -0.56
COMMD4-221ENST00000567935 TMEM68Q96MH6 324 aa11.57□□□□□ -0.56
COMMD4-221ENST00000567935 PFDN5Q99471 154 aa11.57□□□□□ -0.56
COMMD4-221ENST00000567935 TRGV9Q99603 122 aa11.57□□□□□ -0.56
COMMD4-221ENST00000567935 ARL2-SNX15V9GYD0 113 aa11.57□□□□□ -0.56
COMMD4-221ENST00000567935 IGKV1OR2-108A0A075B7D4 117 aa11.56□□□□□ -0.56
COMMD4-221ENST00000567935 A0A096LNT2 108 aa11.56□□□□□ -0.56
COMMD4-221ENST00000567935 TMEM250H0YL14 139 aa11.56□□□□□ -0.56
COMMD4-221ENST00000567935 REG1AP05451 166 aa11.56□□□□□ -0.56
COMMD4-221ENST00000567935 FABP1P07148 127 aa11.56□□□□□ -0.56
COMMD4-221ENST00000567935 DEFA4P12838 97 aa11.56□□□□□ -0.56
COMMD4-221ENST00000567935 CX3CL1P78423 397 aa11.56□□□□□ -0.56
COMMD4-221ENST00000567935 MEF2BQ02080 365 aaPredicted RBP11.56□□□□□ -0.56
COMMD4-221ENST00000567935 Q8N9W7 124 aa11.56□□□□□ -0.56
COMMD4-221ENST00000567935 OR2T6Q8NHC8 308 aa11.56□□□□□ -0.56
COMMD4-221ENST00000567935 NPIPB3Q92617 1050 aa11.56□□□□□ -0.56
COMMD4-221ENST00000567935 RASL11BQ9BPW5 248 aa11.56□□□□□ -0.56
COMMD4-221ENST00000567935 WNT10AQ9GZT5 417 aa11.56□□□□□ -0.56
COMMD4-221ENST00000567935 C7orf69Q9H7B7 122 aa11.56□□□□□ -0.56
COMMD4-221ENST00000567935 TENM1Q9UKZ4 2725 aa11.56□□□□□ -0.56
COMMD4-221ENST00000567935 TRAV40A0A0B4J280 105 aa11.55□□□□□ -0.56
COMMD4-221ENST00000567935 OR5G3P0C626 314 aa11.55□□□□□ -0.56
COMMD4-221ENST00000567935 CD24P25063 80 aa11.55□□□□□ -0.56
COMMD4-221ENST00000567935 RND2P52198 227 aa11.55□□□□□ -0.56
COMMD4-221ENST00000567935 MFAP2P55001 183 aa11.55□□□□□ -0.56
COMMD4-221ENST00000567935 DEFA6Q01524 100 aa11.55□□□□□ -0.56
COMMD4-221ENST00000567935 MLANAQ16655 118 aa11.55□□□□□ -0.56
COMMD4-221ENST00000567935 GCSAMLQ5JQS6 135 aa11.55□□□□□ -0.56
COMMD4-221ENST00000567935 TTC9CQ8N5M4 171 aa11.55□□□□□ -0.56
COMMD4-221ENST00000567935 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.55□□□□□ -0.56
COMMD4-221ENST00000567935 CLRN3Q8NCR9 226 aa11.55□□□□□ -0.56
COMMD4-221ENST00000567935 OR4X1Q8NH49 305 aa11.55□□□□□ -0.56
COMMD4-221ENST00000567935 SGMS2Q8NHU3 365 aa11.55□□□□□ -0.56
COMMD4-221ENST00000567935 HIF1ANQ9NWT6 349 aa11.55□□□□□ -0.56
COMMD4-221ENST00000567935 TECRQ9NZ01 308 aaKnown RBP11.55□□□□□ -0.56
COMMD4-221ENST00000567935 THYN1Q9P016 225 aa11.55□□□□□ -0.56
COMMD4-221ENST00000567935 FUT9Q9Y231 359 aa11.55□□□□□ -0.56
COMMD4-221ENST00000567935 ELOA3CA0A087WX78 387 aaPredicted RBP11.54□□□□□ -0.56
COMMD4-221ENST00000567935 I3L2K1 104 aa11.54□□□□□ -0.56
COMMD4-221ENST00000567935 CLN5O75503 358 aa11.54□□□□□ -0.56
COMMD4-221ENST00000567935 SCO1O75880 301 aa11.54□□□□□ -0.56
COMMD4-221ENST00000567935 RHEBQ15382 184 aa11.54□□□□□ -0.56
COMMD4-221ENST00000567935 FAM74A3Q4VXF1 159 aa11.54□□□□□ -0.56
COMMD4-221ENST00000567935 PQLC2Q6ZP29 291 aa11.54□□□□□ -0.56
COMMD4-221ENST00000567935 ZNF48Q96MX3 618 aaPredicted RBP11.54□□□□□ -0.56
COMMD4-221ENST00000567935 SLC25A33Q9BSK2 321 aa11.54□□□□□ -0.56
COMMD4-221ENST00000567935 TMEM167BQ9NRX6 74 aa11.54□□□□□ -0.56
COMMD4-221ENST00000567935 TNFRSF19Q9NS68 423 aa11.54□□□□□ -0.56
COMMD4-221ENST00000567935 IGKV1D-37A0A075B6S9 117 aa11.53□□□□□ -0.56
COMMD4-221ENST00000567935 PDE6DO43924 150 aa11.53□□□□□ -0.56
COMMD4-221ENST00000567935 SCGB2A1O75556 95 aa11.53□□□□□ -0.56
COMMD4-221ENST00000567935 HIST1H1BP16401 226 aaKnown RBP11.53□□□□□ -0.56
COMMD4-221ENST00000567935 PNRC1Q12796 327 aaPredicted RBP11.53□□□□□ -0.56
COMMD4-221ENST00000567935 KLK9Q2XQG4 91 aa11.53□□□□□ -0.56
COMMD4-221ENST00000567935 FAM78BQ5VT40 261 aa11.53□□□□□ -0.56
COMMD4-221ENST00000567935 ATRAIDQ6UW56 229 aa11.53□□□□□ -0.56
COMMD4-221ENST00000567935 IQCF2Q8IXL9 164 aa11.53□□□□□ -0.56
COMMD4-221ENST00000567935 CYB561D1Q8N8Q1 229 aa11.53□□□□□ -0.56
COMMD4-221ENST00000567935 RBM14Q96PK6 669 aaKnown RBP11.53□□□□□ -0.56
COMMD4-221ENST00000567935 NIPSNAP3BQ9BS92 247 aa11.53□□□□□ -0.56
COMMD4-221ENST00000567935 DNAJC4Q9NNZ3 241 aa11.53□□□□□ -0.56
COMMD4-221ENST00000567935 KLK9Q9UKQ9 250 aa11.53□□□□□ -0.56
COMMD4-221ENST00000567935 MOB4Q9Y3A3 225 aa11.53□□□□□ -0.56
COMMD4-221ENST00000567935 TRAV30A0A087WSZ9 112 aa11.52□□□□□ -0.57
COMMD4-221ENST00000567935 IGHV7-81A0A0B4J1V7 117 aa11.52□□□□□ -0.57
COMMD4-221ENST00000567935 PSMB11A5LHX3 300 aa11.52□□□□□ -0.57
COMMD4-221ENST00000567935 F6UZH7 168 aa11.52□□□□□ -0.57
COMMD4-221ENST00000567935 M0QZK8 103 aa11.52□□□□□ -0.57
COMMD4-221ENST00000567935 HMGB3O15347 200 aaKnown RBP11.52□□□□□ -0.57
COMMD4-221ENST00000567935 COX7A2P2O60397 106 aa11.52□□□□□ -0.57
COMMD4-221ENST00000567935 ARL14EPLP0DKL9 152 aa11.52□□□□□ -0.57
COMMD4-221ENST00000567935 PAX6P26367 422 aa11.52□□□□□ -0.57
COMMD4-221ENST00000567935 GCHFRP30047 84 aa11.52□□□□□ -0.57
COMMD4-221ENST00000567935 PLP1P60201 277 aa11.52□□□□□ -0.57
COMMD4-221ENST00000567935 BTN1A1Q13410 526 aa11.52□□□□□ -0.57
COMMD4-221ENST00000567935 FAM120AOSQ5T036 256 aa11.52□□□□□ -0.57
COMMD4-221ENST00000567935 PITPNC1Q9UKF7 332 aa11.52□□□□□ -0.57
COMMD4-221ENST00000567935 IGLV11-55A0A075B6I3 123 aa11.51□□□□□ -0.57
COMMD4-221ENST00000567935 C8orf88P0DMB2 117 aa11.51□□□□□ -0.57
COMMD4-221ENST00000567935 NPBWR1P48145 328 aa11.51□□□□□ -0.57
COMMD4-221ENST00000567935 CD81P60033 236 aa11.51□□□□□ -0.57
COMMD4-221ENST00000567935 FAM90A2PQ658T7 463 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms