RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 TOMM20LQ6UXN7 152 aa18.72■□□□□ 0.59
LINC00543-201ENST00000567234 C1orf122Q6ZSJ8 110 aa18.72■□□□□ 0.59
LINC00543-201ENST00000567234 ZNF430Q9H8G1 570 aaPredicted RBP18.72■□□□□ 0.59
LINC00543-201ENST00000567234 ENSAO43768 121 aaKnown RBP18.71■□□□□ 0.59
LINC00543-201ENST00000567234 COX7A1P24310 79 aa18.71■□□□□ 0.59
LINC00543-201ENST00000567234 ORAOV1Q8WV07 137 aa18.71■□□□□ 0.59
LINC00543-201ENST00000567234 RPEQ96AT9 228 aa18.71■□□□□ 0.59
LINC00543-201ENST00000567234 RNF5Q99942 180 aa18.71■□□□□ 0.59
LINC00543-201ENST00000567234 LY96Q9Y6Y9 160 aa18.71■□□□□ 0.59
LINC00543-201ENST00000567234 C11orf94C9JXX5 98 aa18.7■□□□□ 0.58
LINC00543-201ENST00000567234 SLC25A17O43808 307 aa18.7■□□□□ 0.58
LINC00543-201ENST00000567234 REG1AP05451 166 aa18.7■□□□□ 0.58
LINC00543-201ENST00000567234 CDKN1AP38936 164 aa18.7■□□□□ 0.58
LINC00543-201ENST00000567234 SAPCD1Q5SSQ6 148 aa18.7■□□□□ 0.58
LINC00543-201ENST00000567234 PNKDQ8N490 385 aa18.7■□□□□ 0.58
LINC00543-201ENST00000567234 OR10W1Q8NGF6 305 aa18.7■□□□□ 0.58
LINC00543-201ENST00000567234 CACNG8Q8WXS5 425 aa18.7■□□□□ 0.58
LINC00543-201ENST00000567234 RNF2Q99496 336 aa18.7■□□□□ 0.58
LINC00543-201ENST00000567234 DLX1P56177 255 aa18.7■□□□□ 0.58
LINC00543-201ENST00000567234 MOB3BQ86TA1 216 aa18.7■□□□□ 0.58
LINC00543-201ENST00000567234 MMD2Q8IY49 270 aa18.7■□□□□ 0.58
LINC00543-201ENST00000567234 KIR3DL3Q8N743 410 aa18.7■□□□□ 0.58
LINC00543-201ENST00000567234 OR5AU1Q8NGC0 362 aa18.7■□□□□ 0.58
LINC00543-201ENST00000567234 SLC45A2Q9UMX9 530 aa18.7■□□□□ 0.58
LINC00543-201ENST00000567234 LRRK2Q5S007 2527 aa18.69■□□□□ 0.58
LINC00543-201ENST00000567234 CRYGBP07316 175 aa18.69■□□□□ 0.58
LINC00543-201ENST00000567234 PRTN3P24158 256 aa18.69■□□□□ 0.58
LINC00543-201ENST00000567234 CYB5R2Q6BCY4 276 aa18.69■□□□□ 0.58
LINC00543-201ENST00000567234 TMEM256Q8N2U0 113 aa18.69■□□□□ 0.58
LINC00543-201ENST00000567234 A0A1W2PPV4 95 aa18.68■□□□□ 0.58
LINC00543-201ENST00000567234 CGB1A6NKQ9 187 aa18.68■□□□□ 0.58
LINC00543-201ENST00000567234 SUB1P53999 127 aaKnown RBP eCLIP18.68■□□□□ 0.58
LINC00543-201ENST00000567234 ARF6P62330 175 aa18.68■□□□□ 0.58
LINC00543-201ENST00000567234 MRGPRG-AS1Q2M3A8 158 aa18.68■□□□□ 0.58
LINC00543-201ENST00000567234 Q6ZWC4 215 aa18.68■□□□□ 0.58
LINC00543-201ENST00000567234 OR2D3Q8NGH3 330 aa18.68■□□□□ 0.58
LINC00543-201ENST00000567234 SFRP2Q96HF1 295 aa18.68■□□□□ 0.58
LINC00543-201ENST00000567234 RITA1Q96K30 269 aa18.68■□□□□ 0.58
LINC00543-201ENST00000567234 IGHV3-72A0A0B4J1Y9 119 aa18.67■□□□□ 0.58
LINC00543-201ENST00000567234 MDFIC2A0A1B0GVS7 189 aa18.67■□□□□ 0.58
LINC00543-201ENST00000567234 PAGE4O60829 102 aa18.67■□□□□ 0.58
LINC00543-201ENST00000567234 HTR1DP28221 377 aa18.67■□□□□ 0.58
LINC00543-201ENST00000567234 CD69Q07108 199 aa18.67■□□□□ 0.58
LINC00543-201ENST00000567234 MIC13Q5XKP0 118 aa18.67■□□□□ 0.58
LINC00543-201ENST00000567234 SLC35E1Q96K37 410 aa18.67■□□□□ 0.58
LINC00543-201ENST00000567234 DCHS2Q6V1P9 2916 aa18.67■□□□□ 0.58
LINC00543-201ENST00000567234 E7EUB6 86 aa18.67■□□□□ 0.58
LINC00543-201ENST00000567234 DPM3Q9P2X0 92 aa18.67■□□□□ 0.58
LINC00543-201ENST00000567234 ARHGAP32A7KAX9 2087 aa18.66■□□□□ 0.58
LINC00543-201ENST00000567234 A0A1W2PPI3 338 aa18.66■□□□□ 0.58
LINC00543-201ENST00000567234 HMGB3O15347 200 aaKnown RBP18.66■□□□□ 0.58
LINC00543-201ENST00000567234 MT-ND6P03923 174 aa18.66■□□□□ 0.58
LINC00543-201ENST00000567234 CEACAM3P40198 252 aa18.66■□□□□ 0.58
LINC00543-201ENST00000567234 PRR20EP86478 221 aa18.66■□□□□ 0.58
LINC00543-201ENST00000567234 PRR20CP86479 221 aa18.66■□□□□ 0.58
LINC00543-201ENST00000567234 PRR20DP86480 221 aa18.66■□□□□ 0.58
LINC00543-201ENST00000567234 PRR20BP86481 221 aa18.66■□□□□ 0.58
LINC00543-201ENST00000567234 PRR20AP86496 221 aa18.66■□□□□ 0.58
LINC00543-201ENST00000567234 PSG5Q15238 335 aa18.66■□□□□ 0.58
LINC00543-201ENST00000567234 PRSS8Q16651 343 aa18.66■□□□□ 0.58
LINC00543-201ENST00000567234 SGMS2Q8NHU3 365 aa18.66■□□□□ 0.58
LINC00543-201ENST00000567234 UQCR10Q9UDW1 63 aa18.66■□□□□ 0.58
LINC00543-201ENST00000567234 OVOL3O00110 214 aa18.65■□□□□ 0.58
LINC00543-201ENST00000567234 CRISP2P16562 243 aa18.65■□□□□ 0.58
LINC00543-201ENST00000567234 WT1-ASQ06250 92 aa18.65■□□□□ 0.58
LINC00543-201ENST00000567234 OR5I1Q13606 314 aa18.65■□□□□ 0.58
LINC00543-201ENST00000567234 STPG3Q8N7X2 389 aa18.65■□□□□ 0.58
LINC00543-201ENST00000567234 ZNF586Q9NXT0 402 aa18.65■□□□□ 0.58
LINC00543-201ENST00000567234 SIGLEC9Q9Y336 463 aa18.65■□□□□ 0.58
LINC00543-201ENST00000567234 A1L4Q6 167 aa18.65■□□□□ 0.58
LINC00543-201ENST00000567234 ODF3BA8MYP8 253 aa18.65■□□□□ 0.58
LINC00543-201ENST00000567234 ADMP35318 185 aa18.65■□□□□ 0.58
LINC00543-201ENST00000567234 COTL1Q14019 142 aa18.65■□□□□ 0.58
LINC00543-201ENST00000567234 GCSAMLQ5JQS6 135 aa18.65■□□□□ 0.58
LINC00543-201ENST00000567234 TPSG1Q9NRR2 321 aa18.65■□□□□ 0.58
LINC00543-201ENST00000567234 NDUFS7O75251 213 aa18.64■□□□□ 0.57
LINC00543-201ENST00000567234 PLA2G2AP14555 144 aa18.64■□□□□ 0.57
LINC00543-201ENST00000567234 PRB3Q04118 309 aaPredicted RBP18.64■□□□□ 0.57
LINC00543-201ENST00000567234 DMRTA1Q5VZB9 504 aa18.64■□□□□ 0.57
LINC00543-201ENST00000567234 CST9LP1Q5W188 147 aa18.64■□□□□ 0.57
LINC00543-201ENST00000567234 SSMEM1Q8WWF3 244 aa18.64■□□□□ 0.57
LINC00543-201ENST00000567234 K7EP13 123 aa18.63■□□□□ 0.57
LINC00543-201ENST00000567234 ACTL6BO94805 426 aa18.63■□□□□ 0.57
LINC00543-201ENST00000567234 STAG3L2P0CL84 134 aa18.63■□□□□ 0.57
LINC00543-201ENST00000567234 STAG3L3P0CL85 134 aa18.63■□□□□ 0.57
LINC00543-201ENST00000567234 NPPCP23582 126 aa18.63■□□□□ 0.57
LINC00543-201ENST00000567234 C10orf55Q5SWW7 151 aa18.63■□□□□ 0.57
LINC00543-201ENST00000567234 KLHDC1Q8N7A1 406 aa18.63■□□□□ 0.57
LINC00543-201ENST00000567234 IL36BQ9NZH7 164 aa18.63■□□□□ 0.57
LINC00543-201ENST00000567234 RPL27AP46776 148 aaKnown RBP18.63■□□□□ 0.57
LINC00543-201ENST00000567234 RHOBP62745 196 aa18.63■□□□□ 0.57
LINC00543-201ENST00000567234 GNB1P62873 340 aa18.63■□□□□ 0.57
LINC00543-201ENST00000567234 HCP5Q6MZN7 132 aa18.63■□□□□ 0.57
LINC00543-201ENST00000567234 PPP1R27Q86WC6 154 aa18.63■□□□□ 0.57
LINC00543-201ENST00000567234 ZNF114Q8NC26 417 aa18.63■□□□□ 0.57
LINC00543-201ENST00000567234 OR10G8Q8NGN5 311 aa18.63■□□□□ 0.57
LINC00543-201ENST00000567234 HSPB9Q9BQS6 159 aa18.63■□□□□ 0.57
LINC00543-201ENST00000567234 C20orf202A1L168 122 aa18.62■□□□□ 0.57
LINC00543-201ENST00000567234 CXorf1O96002 111 aa18.62■□□□□ 0.57
LINC00543-201ENST00000567234 LINC00869P0C866 280 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms