RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 SPART-AS1P0CW21 52 aa11.02□□□□□ -0.65
PALB2-205ENST00000567003 PGAM2P15259 253 aa11.02□□□□□ -0.65
PALB2-205ENST00000567003 RPS19P39019 145 aaKnown RBP11.02□□□□□ -0.65
PALB2-205ENST00000567003 SUB1P53999 127 aaKnown RBP eCLIP11.02□□□□□ -0.65
PALB2-205ENST00000567003 UCP3P55916 312 aa11.02□□□□□ -0.65
PALB2-205ENST00000567003 USF2Q15853 346 aaPredicted RBP11.02□□□□□ -0.65
PALB2-205ENST00000567003 KCTD21Q4G0X4 260 aa11.02□□□□□ -0.65
PALB2-205ENST00000567003 ZNF705AQ6ZN79 300 aaPredicted RBP11.02□□□□□ -0.65
PALB2-205ENST00000567003 SNX29P2Q8IUI4 249 aa11.02□□□□□ -0.65
PALB2-205ENST00000567003 PDCD10Q9BUL8 212 aa11.02□□□□□ -0.65
PALB2-205ENST00000567003 C1QTNF4Q9BXJ3 329 aa11.02□□□□□ -0.65
PALB2-205ENST00000567003 ENY2Q9NPA8 101 aa11.02□□□□□ -0.65
PALB2-205ENST00000567003 IGLC1P0CG04 106 aa11.01□□□□□ -0.65
PALB2-205ENST00000567003 EIF2B2P49770 351 aaKnown RBP11.01□□□□□ -0.65
PALB2-205ENST00000567003 RND2P52198 227 aa11.01□□□□□ -0.65
PALB2-205ENST00000567003 LSM3P62310 102 aaKnown RBP11.01□□□□□ -0.65
PALB2-205ENST00000567003 DHODHQ02127 395 aa11.01□□□□□ -0.65
PALB2-205ENST00000567003 SP6Q3SY56 376 aa11.01□□□□□ -0.65
PALB2-205ENST00000567003 RNASE12Q5GAN4 147 aaKnown RBP11.01□□□□□ -0.65
PALB2-205ENST00000567003 C1orf134Q5TEV5 83 aa11.01□□□□□ -0.65
PALB2-205ENST00000567003 HERC1Q15751 4861 aa11.01□□□□□ -0.65
PALB2-205ENST00000567003 ZNF705FA8MVS1 300 aaPredicted RBP11□□□□□ -0.65
PALB2-205ENST00000567003 ZNF705DP0CH99 300 aaPredicted RBP11□□□□□ -0.65
PALB2-205ENST00000567003 ZNF705BP0CI00 300 aaPredicted RBP11□□□□□ -0.65
PALB2-205ENST00000567003 HLA-DRB4P13762 266 aa11□□□□□ -0.65
PALB2-205ENST00000567003 RPL5P46777 297 aaKnown RBP11□□□□□ -0.65
PALB2-205ENST00000567003 PIGPP57054 158 aa11□□□□□ -0.65
PALB2-205ENST00000567003 NUTF2P61970 127 aaKnown RBP11□□□□□ -0.65
PALB2-205ENST00000567003 SNRPD3P62318 126 aaKnown RBP11□□□□□ -0.65
PALB2-205ENST00000567003 BSXQ3C1V8 233 aa11□□□□□ -0.65
PALB2-205ENST00000567003 FAM222AQ5U5X8 452 aa11□□□□□ -0.65
PALB2-205ENST00000567003 PRSS54Q6PEW0 395 aa11□□□□□ -0.65
PALB2-205ENST00000567003 OR1S2Q8NGQ3 325 aa11□□□□□ -0.65
PALB2-205ENST00000567003 DKK2Q9UBU2 259 aa11□□□□□ -0.65
PALB2-205ENST00000567003 HLA-DRB4X5D2U9 266 aa11□□□□□ -0.65
PALB2-205ENST00000567003 LCE2BO14633 110 aa10.99□□□□□ -0.65
PALB2-205ENST00000567003 SCGB2A1O75556 95 aa10.99□□□□□ -0.65
PALB2-205ENST00000567003 IL4P05112 153 aa10.99□□□□□ -0.65
PALB2-205ENST00000567003 OR10J1P30954 320 aa10.99□□□□□ -0.65
PALB2-205ENST00000567003 RCVRNP35243 200 aa10.99□□□□□ -0.65
PALB2-205ENST00000567003 RND3P61587 244 aa10.99□□□□□ -0.65
PALB2-205ENST00000567003 TNP2Q05952 138 aa10.99□□□□□ -0.65
PALB2-205ENST00000567003 TRIM16LQ309B1 348 aa10.99□□□□□ -0.65
PALB2-205ENST00000567003 SOHLH1Q5JUK2 328 aa10.99□□□□□ -0.65
PALB2-205ENST00000567003 TMEM88Q6PEY1 159 aa10.99□□□□□ -0.65
PALB2-205ENST00000567003 SIGLEC15Q6ZMC9 328 aa10.99□□□□□ -0.65
PALB2-205ENST00000567003 Q8WTZ3 238 aa10.99□□□□□ -0.65
PALB2-205ENST00000567003 NEU1Q99519 415 aa10.99□□□□□ -0.65
PALB2-205ENST00000567003 NRN1Q9NPD7 142 aa10.99□□□□□ -0.65
PALB2-205ENST00000567003 TRAV30A0A087WSZ9 112 aa10.98□□□□□ -0.65
PALB2-205ENST00000567003 C3orf85A0A1B0GTC6 90 aa10.98□□□□□ -0.65
PALB2-205ENST00000567003 C16orf90A8MZG2 172 aa10.98□□□□□ -0.65
PALB2-205ENST00000567003 TMEM127O75204 238 aa10.98□□□□□ -0.65
PALB2-205ENST00000567003 NXPH3O95157 252 aa10.98□□□□□ -0.65
PALB2-205ENST00000567003 AP2S1P53680 142 aaPredicted RBP10.98□□□□□ -0.65
PALB2-205ENST00000567003 CROCCP3Q8IVE0 287 aa10.98□□□□□ -0.65
PALB2-205ENST00000567003 MAPKAPK5-AS1Q8N8E1 139 aa10.98□□□□□ -0.65
PALB2-205ENST00000567003 RNASE11Q8TAA1 199 aaKnown RBP10.98□□□□□ -0.65
PALB2-205ENST00000567003 NIPSNAP3BQ9BS92 247 aa10.98□□□□□ -0.65
PALB2-205ENST00000567003 COMMD3Q9UBI1 195 aa10.98□□□□□ -0.65
PALB2-205ENST00000567003 RFNGQ9Y644 331 aa10.98□□□□□ -0.65
PALB2-205ENST00000567003 RPS10-NUDT3A0A1W2PQS6 291 aa10.97□□□□□ -0.65
PALB2-205ENST00000567003 TMEM189A5PLL7 270 aa10.97□□□□□ -0.65
PALB2-205ENST00000567003 TMEM170AQ8WVE7 144 aa10.97□□□□□ -0.65
PALB2-205ENST00000567003 LINC00052Q96N35 136 aa10.97□□□□□ -0.65
PALB2-205ENST00000567003 YTHDF1Q9BYJ9 559 aaKnown RBP10.97□□□□□ -0.65
PALB2-205ENST00000567003 WDR12Q9GZL7 423 aaKnown RBP10.97□□□□□ -0.65
PALB2-205ENST00000567003 SLC35B3Q9H1N7 401 aa10.97□□□□□ -0.65
PALB2-205ENST00000567003 SCPEP1Q9HB40 452 aa10.97□□□□□ -0.65
PALB2-205ENST00000567003 BUB3O43684 328 aa10.96□□□□□ -0.65
PALB2-205ENST00000567003 NKX2-1P43699 371 aaPredicted RBP10.96□□□□□ -0.65
PALB2-205ENST00000567003 YPEL3P61236 119 aaPredicted RBP10.96□□□□□ -0.65
PALB2-205ENST00000567003 RNF212Q495C1 297 aa10.96□□□□□ -0.65
PALB2-205ENST00000567003 LHFPL1Q86WI0 220 aa10.96□□□□□ -0.65
PALB2-205ENST00000567003 ZNF709Q8N972 641 aa10.96□□□□□ -0.65
PALB2-205ENST00000567003 OR51G1Q8NGK1 321 aa10.96□□□□□ -0.65
PALB2-205ENST00000567003 RRNAD1Q96FB5 475 aaKnown RBP10.96□□□□□ -0.65
PALB2-205ENST00000567003 ACY3Q96HD9 319 aa10.96□□□□□ -0.65
PALB2-205ENST00000567003 FAM210BQ96KR6 192 aa10.96□□□□□ -0.65
PALB2-205ENST00000567003 HEYLQ9NQ87 328 aaPredicted RBP10.96□□□□□ -0.65
PALB2-205ENST00000567003 SMIM9A6NGZ8 99 aa10.95□□□□□ -0.66
PALB2-205ENST00000567003 HTR2BP41595 481 aa10.95□□□□□ -0.66
PALB2-205ENST00000567003 SPCS3P61009 180 aa10.95□□□□□ -0.66
PALB2-205ENST00000567003 OR4B1Q8NGF8 309 aa10.95□□□□□ -0.66
PALB2-205ENST00000567003 LHFPL5Q8TAF8 219 aa10.95□□□□□ -0.66
PALB2-205ENST00000567003 NPIPB3Q92617 1050 aa10.95□□□□□ -0.66
PALB2-205ENST00000567003 ZNF486Q96H40 463 aaPredicted RBP10.95□□□□□ -0.66
PALB2-205ENST00000567003 SAV1Q9H4B6 383 aaPredicted RBP10.95□□□□□ -0.66
PALB2-205ENST00000567003 SEPSECSQ9HD40 501 aaKnown RBP10.95□□□□□ -0.66
PALB2-205ENST00000567003 YTHDF2Q9Y5A9 579 aaKnown RBP10.95□□□□□ -0.66
PALB2-205ENST00000567003 LOC102723971A0A1B0GUV8 181 aa10.94□□□□□ -0.66
PALB2-205ENST00000567003 F6UB75 175 aa10.94□□□□□ -0.66
PALB2-205ENST00000567003 ATG12O94817 140 aa10.94□□□□□ -0.66
PALB2-205ENST00000567003 TOMM40O96008 361 aa10.94□□□□□ -0.66
PALB2-205ENST00000567003 SLC25A4P12235 298 aa10.94□□□□□ -0.66
PALB2-205ENST00000567003 ELK1P19419 428 aa10.94□□□□□ -0.66
PALB2-205ENST00000567003 UCP1P25874 307 aa10.94□□□□□ -0.66
PALB2-205ENST00000567003 C2orf83Q53S99 150 aa10.94□□□□□ -0.66
PALB2-205ENST00000567003 C1orf158Q8N1D5 194 aa10.94□□□□□ -0.66
PALB2-205ENST00000567003 SLC24A4Q8NFF2 622 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms