RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 IGLV2-23P01705 113 aa13.51□□□□□ -0.25
CMTM3-213ENST00000566756 REG1AP05451 166 aa13.51□□□□□ -0.25
CMTM3-213ENST00000566756 CCL3L1P16619 93 aa13.51□□□□□ -0.25
CMTM3-213ENST00000566756 GRNP28799 593 aaKnown RBP13.51□□□□□ -0.25
CMTM3-213ENST00000566756 NUTF2P61970 127 aaKnown RBP13.51□□□□□ -0.25
CMTM3-213ENST00000566756 CDSNQ15517 529 aa13.51□□□□□ -0.25
CMTM3-213ENST00000566756 C10orf113Q5VZT2 155 aa13.51□□□□□ -0.25
CMTM3-213ENST00000566756 PVRIGQ6DKI7 326 aa13.51□□□□□ -0.25
CMTM3-213ENST00000566756 ETFRF1Q6IPR1 90 aa13.51□□□□□ -0.25
CMTM3-213ENST00000566756 OR10X1Q8NGY0 326 aa13.51□□□□□ -0.25
CMTM3-213ENST00000566756 OR2T6Q8NHC8 308 aa13.51□□□□□ -0.25
CMTM3-213ENST00000566756 SMIM12Q96EX1 92 aa13.51□□□□□ -0.25
CMTM3-213ENST00000566756 HSPB9Q9BQS6 159 aa13.51□□□□□ -0.25
CMTM3-213ENST00000566756 SAP30LQ9HAJ7 183 aa13.51□□□□□ -0.25
CMTM3-213ENST00000566756 KAAG1Q9UBP8 84 aa13.51□□□□□ -0.25
CMTM3-213ENST00000566756 ARFGEF3Q5TH69 2177 aa13.51□□□□□ -0.25
CMTM3-213ENST00000566756 COL8A2P25067 703 aa13.51□□□□□ -0.25
CMTM3-213ENST00000566756 WT1-ASQ06250 92 aa13.51□□□□□ -0.25
CMTM3-213ENST00000566756 VMA21Q3ZAQ7 101 aa13.51□□□□□ -0.25
CMTM3-213ENST00000566756 STXBP6Q8NFX7 210 aa13.51□□□□□ -0.25
CMTM3-213ENST00000566756 GNB4Q9HAV0 340 aa13.51□□□□□ -0.25
CMTM3-213ENST00000566756 B9A039 149 aa13.5□□□□□ -0.25
CMTM3-213ENST00000566756 M0QZK8 103 aa13.5□□□□□ -0.25
CMTM3-213ENST00000566756 FCN3O75636 299 aa13.5□□□□□ -0.25
CMTM3-213ENST00000566756 GPX1P07203 203 aa13.5□□□□□ -0.25
CMTM3-213ENST00000566756 RNF224P0DH78 156 aa13.5□□□□□ -0.25
CMTM3-213ENST00000566756 RAB4AP20338 218 aa13.5□□□□□ -0.25
CMTM3-213ENST00000566756 LGALS7P47929 136 aa13.5□□□□□ -0.25
CMTM3-213ENST00000566756 TMEM183BQ1AE95 376 aa13.5□□□□□ -0.25
CMTM3-213ENST00000566756 PAXXQ9BUH6 204 aa13.5□□□□□ -0.25
CMTM3-213ENST00000566756 SAMD10Q9BYL1 202 aa13.5□□□□□ -0.25
CMTM3-213ENST00000566756 FNDC4Q9H6D8 234 aaPredicted RBP13.5□□□□□ -0.25
CMTM3-213ENST00000566756 ZNF355PQ9NSJ1 428 aa13.5□□□□□ -0.25
CMTM3-213ENST00000566756 AMMECR1Q9Y4X0 333 aaPredicted RBP13.5□□□□□ -0.25
CMTM3-213ENST00000566756 IGKV1D-37A0A075B6S9 117 aa13.49□□□□□ -0.25
CMTM3-213ENST00000566756 E7EUB6 86 aa13.49□□□□□ -0.25
CMTM3-213ENST00000566756 FSTL3O95633 263 aa13.49□□□□□ -0.25
CMTM3-213ENST00000566756 DLX6P56179 175 aa13.49□□□□□ -0.25
CMTM3-213ENST00000566756 TOMM20LQ6UXN7 152 aa13.49□□□□□ -0.25
CMTM3-213ENST00000566756 SIGLECL1Q8N7X8 197 aa13.49□□□□□ -0.25
CMTM3-213ENST00000566756 MBD6Q96DN6 1003 aa13.49□□□□□ -0.25
CMTM3-213ENST00000566756 SNHG12Q9BXW3 62 aa13.49□□□□□ -0.25
CMTM3-213ENST00000566756 ACACBO00763 2458 aa13.49□□□□□ -0.25
CMTM3-213ENST00000566756 YLPM1P49750 1951 aaKnown RBP13.49□□□□□ -0.25
CMTM3-213ENST00000566756 EREGO14944 169 aa13.49□□□□□ -0.25
CMTM3-213ENST00000566756 FRMD6-AS1P0C7T7 363 aa13.49□□□□□ -0.25
CMTM3-213ENST00000566756 PAX2Q02962 417 aa13.49□□□□□ -0.25
CMTM3-213ENST00000566756 ZNF329Q86UD4 541 aa13.49□□□□□ -0.25
CMTM3-213ENST00000566756 ZNF586Q9NXT0 402 aa13.49□□□□□ -0.25
CMTM3-213ENST00000566756 PKDREJQ9NTG1 2253 aa13.48□□□□□ -0.25
CMTM3-213ENST00000566756 PEX7O00628 323 aa13.48□□□□□ -0.25
CMTM3-213ENST00000566756 CRYGCP07315 174 aa13.48□□□□□ -0.25
CMTM3-213ENST00000566756 MGST1P10620 155 aaKnown RBP13.48□□□□□ -0.25
CMTM3-213ENST00000566756 MYCNOSP40205 109 aa13.48□□□□□ -0.25
CMTM3-213ENST00000566756 FXYD3Q14802 87 aa13.48□□□□□ -0.25
CMTM3-213ENST00000566756 MORN5Q5VZ52 161 aa13.48□□□□□ -0.25
CMTM3-213ENST00000566756 PATE2Q6UY27 113 aa13.48□□□□□ -0.25
CMTM3-213ENST00000566756 TGIF2LXQ8IUE1 241 aa13.48□□□□□ -0.25
CMTM3-213ENST00000566756 ZCCHC24Q8N2G6 241 aaKnown RBP13.48□□□□□ -0.25
CMTM3-213ENST00000566756 NPIPB3Q92617 1050 aa13.48□□□□□ -0.25
CMTM3-213ENST00000566756 TNFRSF14Q92956 283 aa13.48□□□□□ -0.25
CMTM3-213ENST00000566756 KCNS1Q96KK3 526 aa13.48□□□□□ -0.25
CMTM3-213ENST00000566756 TNCP24821 2201 aa13.48□□□□□ -0.25
CMTM3-213ENST00000566756 TRAV5A0A0B4J249 113 aa13.47□□□□□ -0.25
CMTM3-213ENST00000566756 SIAH2O43255 324 aa13.47□□□□□ -0.25
CMTM3-213ENST00000566756 LOXP28300 417 aaPredicted RBP13.47□□□□□ -0.25
CMTM3-213ENST00000566756 TMEM155Q4W5P6 130 aa13.47□□□□□ -0.25
CMTM3-213ENST00000566756 FXYD5Q96DB9 178 aa13.47□□□□□ -0.25
CMTM3-213ENST00000566756 GRAMD2BQ96HH9 432 aa13.47□□□□□ -0.25
CMTM3-213ENST00000566756 MIEN1Q9BRT3 115 aa13.47□□□□□ -0.25
CMTM3-213ENST00000566756 CBLN4Q9NTU7 201 aa13.47□□□□□ -0.25
CMTM3-213ENST00000566756 MRPL27Q9P0M9 148 aaKnown RBP13.47□□□□□ -0.25
CMTM3-213ENST00000566756 BMPR1BO00238 502 aa13.47□□□□□ -0.25
CMTM3-213ENST00000566756 PLAUP00749 431 aa13.47□□□□□ -0.25
CMTM3-213ENST00000566756 REG1BP48304 166 aa13.47□□□□□ -0.25
CMTM3-213ENST00000566756 TEX45Q8NA69 505 aa13.47□□□□□ -0.25
CMTM3-213ENST00000566756 H1FXQ92522 213 aaKnown RBP13.47□□□□□ -0.25
CMTM3-213ENST00000566756 ZNF331Q9NQX6 463 aaPredicted RBP13.47□□□□□ -0.25
CMTM3-213ENST00000566756 ADGRG4Q8IZF6 3080 aa13.46□□□□□ -0.25
CMTM3-213ENST00000566756 NBEAQ8NFP9 2946 aa13.46□□□□□ -0.25
CMTM3-213ENST00000566756 F2Z2F3 143 aa13.46□□□□□ -0.25
CMTM3-213ENST00000566756 COMPP49747 757 aaPredicted RBP13.46□□□□□ -0.25
CMTM3-213ENST00000566756 ZNF672Q499Z4 452 aaPredicted RBP13.46□□□□□ -0.25
CMTM3-213ENST00000566756 C22orf15Q8WYQ4 148 aa13.46□□□□□ -0.25
CMTM3-213ENST00000566756 TMEM190Q8WZ59 177 aa13.46□□□□□ -0.25
CMTM3-213ENST00000566756 PERPQ96FX8 193 aa13.46□□□□□ -0.25
CMTM3-213ENST00000566756 NEU1Q99519 415 aa13.46□□□□□ -0.25
CMTM3-213ENST00000566756 TRGV9Q99603 122 aa13.46□□□□□ -0.25
CMTM3-213ENST00000566756 VAMP8Q9BV40 100 aa13.46□□□□□ -0.25
CMTM3-213ENST00000566756 DYNLRB1Q9NP97 96 aa13.46□□□□□ -0.25
CMTM3-213ENST00000566756 A0A1W2PPI3 338 aa13.45□□□□□ -0.26
CMTM3-213ENST00000566756 APCSP02743 223 aa13.45□□□□□ -0.26
CMTM3-213ENST00000566756 SSBP2P81877 361 aaPredicted RBP13.45□□□□□ -0.26
CMTM3-213ENST00000566756 OR4B1Q8NGF8 309 aa13.45□□□□□ -0.26
CMTM3-213ENST00000566756 SERTAD4Q9NUC0 356 aa13.45□□□□□ -0.26
CMTM3-213ENST00000566756 KLF12Q9Y4X4 402 aa13.45□□□□□ -0.26
CMTM3-213ENST00000566756 CORTO00230 105 aa13.45□□□□□ -0.26
CMTM3-213ENST00000566756 ZNF253O75346 499 aa13.45□□□□□ -0.26
CMTM3-213ENST00000566756 PYYP10082 97 aa13.45□□□□□ -0.26
CMTM3-213ENST00000566756 MRGPRG-AS1Q2M3A8 158 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms