RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 IGKV1-5P01602 117 aa2.44□□□□□ -2.02
CHD9-218ENST00000566029 PRB2P02812 416 aaPredicted RBP2.44□□□□□ -2.02
CHD9-218ENST00000566029 CCL3L1P16619 93 aa2.44□□□□□ -2.02
CHD9-218ENST00000566029 IGF2-ASQ6U949 168 aa2.44□□□□□ -2.02
CHD9-218ENST00000566029 CT55Q8WUE5 264 aa2.44□□□□□ -2.02
CHD9-218ENST00000566029 TRBV20-1A0A075B6N2 111 aa2.44□□□□□ -2.02
CHD9-218ENST00000566029 IGKV1D-43A0A0B4J1Z2 117 aa2.44□□□□□ -2.02
CHD9-218ENST00000566029 MUC21A0A140T8X8 626 aa2.44□□□□□ -2.02
CHD9-218ENST00000566029 FAM90A9PA6NNJ1 464 aa2.44□□□□□ -2.02
CHD9-218ENST00000566029 BRI3O95415 125 aa2.44□□□□□ -2.02
CHD9-218ENST00000566029 FUT6P51993 359 aa2.44□□□□□ -2.02
CHD9-218ENST00000566029 ZNF137PP52743 207 aa2.44□□□□□ -2.02
CHD9-218ENST00000566029 MUC21Q5SSG8 566 aa2.44□□□□□ -2.02
CHD9-218ENST00000566029 FAM120AOSQ5T036 256 aa2.44□□□□□ -2.02
CHD9-218ENST00000566029 C20orf204Q6ZNR8 217 aa2.44□□□□□ -2.02
CHD9-218ENST00000566029 KIR3DL3Q8N743 410 aa2.44□□□□□ -2.02
CHD9-218ENST00000566029 FGFBP3Q8TAT2 258 aa2.44□□□□□ -2.02
CHD9-218ENST00000566029 C10orf105Q8TEF2 133 aa2.44□□□□□ -2.02
CHD9-218ENST00000566029 NRG2O14511 850 aaPredicted RBP2.43□□□□□ -2.02
CHD9-218ENST00000566029 ZIC3O60481 467 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 HSD52Q0P140 79 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 SLC25A47Q6Q0C1 308 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 TMEM14EPQ6UXP3 125 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 FOXI2Q6ZQN5 318 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 C5orf17Q8NAS9 161 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 ZNF502Q8TBZ5 544 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 FAM222BQ8WU58 562 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 KIAA1549LQ6ZVL6 1849 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 NPIPB5A8MRT5 1133 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 CCL3P10147 92 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 UBE2L3P68036 154 aaKnown RBP2.43□□□□□ -2.02
CHD9-218ENST00000566029 ERHP84090 104 aaKnown RBP2.43□□□□□ -2.02
CHD9-218ENST00000566029 NPIPB3Q92617 1050 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 PRB1P04280 392 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 CIRBPQ14011 172 aaKnown RBP2.43□□□□□ -2.02
CHD9-218ENST00000566029 FAM110AQ9BQ89 295 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 U3KQE9 123 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 ASCC3Q8N3C0 2202 aaKnown RBP2.43□□□□□ -2.02
CHD9-218ENST00000566029 A0A1W2PQD3 144 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 K7ESM1 405 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 TM4SF5O14894 197 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 HOXA3O43365 443 aaPredicted RBP2.43□□□□□ -2.02
CHD9-218ENST00000566029 ZNF324O75467 553 aaPredicted RBP2.43□□□□□ -2.02
CHD9-218ENST00000566029 IGLV3-1P01715 115 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 SAMD5Q5TGI4 173 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 CLDN23Q96B33 292 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 SPACA5Q96QH8 159 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 METTL26Q96S19 204 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 PNRC2Q9NPJ4 139 aaKnown RBP2.43□□□□□ -2.02
CHD9-218ENST00000566029 OSTCQ9NRP0 149 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 SIT1Q9Y3P8 196 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 SNURFLB1AK76 121 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 C9JCJ5 164 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 TIMM23BQ5SRD1 257 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 APOBEC3DQ96AK3 386 aaPredicted RBP2.43□□□□□ -2.02
CHD9-218ENST00000566029 ZNF714Q96N38 554 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 SLC25A2Q9BXI2 301 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 QTRT1Q9BXR0 403 aaKnown RBP2.43□□□□□ -2.02
CHD9-218ENST00000566029 EPDR1Q9UM22 224 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 CISD3P0C7P0 127 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 IL11P20809 199 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 RPL31P62899 125 aaKnown RBP2.43□□□□□ -2.02
CHD9-218ENST00000566029 VWC2Q2TAL6 325 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 ZNF818PQ6ZRF7 136 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 YRDCQ86U90 279 aaKnown RBP2.43□□□□□ -2.02
CHD9-218ENST00000566029 BCORP1Q8N888 145 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 V9GYV3 84 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 FAM90A26D6RGX4 464 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 H3BP45 60 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 FOXH1O75593 365 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 ZNF324BQ6AW86 544 aaPredicted RBP2.43□□□□□ -2.02
CHD9-218ENST00000566029 LSM10Q969L4 123 aaKnown RBP2.43□□□□□ -2.02
CHD9-218ENST00000566029 AJUBAQ96IF1 538 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 CCL28Q9NRJ3 127 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 CACNG5Q9UF02 275 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 NDUFB3O43676 98 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 DSCR4P56555 118 aaPredicted RBP2.43□□□□□ -2.02
CHD9-218ENST00000566029 Q6ZRM9 215 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 ZNF488Q96MN9 340 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 TMEM147Q9BVK8 224 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 IGKV1-6A0A0C4DH72 117 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 FAM231BA6NCW3 169 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 PMS2P5A8MQ11 134 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 F5H697 171 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 F8WDY8 70 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 BUB3O43684 328 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 PDCD6O75340 191 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 BCL3P20749 454 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 LINC00173Q6ZV60 143 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 FAM214BQ7L5A3 538 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 OR8B12Q8NGG6 310 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 TAF15Q92804 592 aaKnown RBP eCLIP2.43□□□□□ -2.02
CHD9-218ENST00000566029 LYZL4Q96KX0 146 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 HSD17B10Q99714 261 aaKnown RBP2.43□□□□□ -2.02
CHD9-218ENST00000566029 PTPRBP23467 1997 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 C1orf61Q13536 156 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 ABHD17AQ96GS6 310 aa2.43□□□□□ -2.02
CHD9-218ENST00000566029 TRAV12-3A0A0B4J271 114 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 NKX2-8O15522 239 aa2.42□□□□□ -2.02
CHD9-218ENST00000566029 PSMB8P28062 276 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms