RNA–Protein interactions for RNA: ENST00000566009.5

SMPD3-206, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-206ENST00000566009 EBLN2Q6P2I7 272 aa5.78□□□□□ -1.48
SMPD3-206ENST00000566009 AMTNQ6UX39 209 aa5.78□□□□□ -1.48
SMPD3-206ENST00000566009 TMEM144Q7Z5S9 345 aa5.78□□□□□ -1.48
SMPD3-206ENST00000566009 OR1P1Q8NH06 330 aa5.78□□□□□ -1.48
SMPD3-206ENST00000566009 TCTEX1D2Q8WW35 142 aa5.78□□□□□ -1.48
SMPD3-206ENST00000566009 LSM10Q969L4 123 aaKnown RBP5.78□□□□□ -1.48
SMPD3-206ENST00000566009 TMPRSS5Q9H3S3 457 aa5.78□□□□□ -1.48
SMPD3-206ENST00000566009 C12orf4Q9NQ89 552 aa5.78□□□□□ -1.48
SMPD3-206ENST00000566009 NDUFA4L2Q9NRX3 87 aa5.78□□□□□ -1.48
SMPD3-206ENST00000566009 RBMX2Q9Y388 322 aaKnown RBP5.78□□□□□ -1.48
SMPD3-206ENST00000566009 A0A0J9YX75 114 aa5.77□□□□□ -1.49
SMPD3-206ENST00000566009 A6NHS1 94 aa5.77□□□□□ -1.49
SMPD3-206ENST00000566009 ZNF98A6NK75 572 aa5.77□□□□□ -1.49
SMPD3-206ENST00000566009 C9JCJ5 164 aa5.77□□□□□ -1.49
SMPD3-206ENST00000566009 MAPK3P27361 379 aaPredicted RBP5.77□□□□□ -1.49
SMPD3-206ENST00000566009 NPBWR1P48145 328 aa5.77□□□□□ -1.49
SMPD3-206ENST00000566009 AQP4P55087 323 aa5.77□□□□□ -1.49
SMPD3-206ENST00000566009 TAS2R60P59551 318 aa5.77□□□□□ -1.49
SMPD3-206ENST00000566009 SPINK13Q1W4C9 94 aa5.77□□□□□ -1.49
SMPD3-206ENST00000566009 MORN5Q5VZ52 161 aa5.77□□□□□ -1.49
SMPD3-206ENST00000566009 IZUMO2Q6UXV1 221 aa5.77□□□□□ -1.49
SMPD3-206ENST00000566009 OR1L8Q8NGR8 309 aa5.77□□□□□ -1.49
SMPD3-206ENST00000566009 DERL3Q96Q80 235 aa5.77□□□□□ -1.49
SMPD3-206ENST00000566009 LINC01587Q99440 93 aa5.77□□□□□ -1.49
SMPD3-206ENST00000566009 AIFM2Q9BRQ8 373 aa5.77□□□□□ -1.49
SMPD3-206ENST00000566009 MND1Q9BWT6 205 aa5.77□□□□□ -1.49
SMPD3-206ENST00000566009 DCSTAMPQ9H295 470 aa5.77□□□□□ -1.49
SMPD3-206ENST00000566009 SPATA2Q9UM82 520 aa5.77□□□□□ -1.49
SMPD3-206ENST00000566009 A8MTW9 85 aa5.76□□□□□ -1.49
SMPD3-206ENST00000566009 M0R2Z0 102 aa5.76□□□□□ -1.49
SMPD3-206ENST00000566009 IGLV2-14P01704 120 aa5.76□□□□□ -1.49
SMPD3-206ENST00000566009 CD36P16671 472 aa5.76□□□□□ -1.49
SMPD3-206ENST00000566009 UCP1P25874 307 aa5.76□□□□□ -1.49
SMPD3-206ENST00000566009 CALRP27797 417 aaKnown RBP5.76□□□□□ -1.49
SMPD3-206ENST00000566009 ETV6P41212 452 aa5.76□□□□□ -1.49
SMPD3-206ENST00000566009 WDR73Q6P4I2 378 aa5.76□□□□□ -1.49
SMPD3-206ENST00000566009 ZNF493Q6ZR52 646 aa5.76□□□□□ -1.49
SMPD3-206ENST00000566009 H1FOOQ8IZA3 346 aaPredicted RBP5.76□□□□□ -1.49
SMPD3-206ENST00000566009 RNASE8Q8TDE3 154 aaKnown RBP5.76□□□□□ -1.49
SMPD3-206ENST00000566009 TMEM230Q96A57 120 aa5.76□□□□□ -1.49
SMPD3-206ENST00000566009 PINX1Q96BK5 328 aaKnown RBP5.76□□□□□ -1.49
SMPD3-206ENST00000566009 HSD17B10Q99714 261 aaKnown RBP5.76□□□□□ -1.49
SMPD3-206ENST00000566009 CMSS1Q9BQ75 279 aaKnown RBP5.76□□□□□ -1.49
SMPD3-206ENST00000566009 GINS4Q9BRT9 223 aa5.76□□□□□ -1.49
SMPD3-206ENST00000566009 VCX3BQ9H321 246 aa5.76□□□□□ -1.49
SMPD3-206ENST00000566009 DUSP21Q9H596 190 aa5.76□□□□□ -1.49
SMPD3-206ENST00000566009 A0A0A6YYD4 124 aa5.75□□□□□ -1.49
SMPD3-206ENST00000566009 PAX4O43316 350 aa5.75□□□□□ -1.49
SMPD3-206ENST00000566009 RGS10O43665 173 aa5.75□□□□□ -1.49
SMPD3-206ENST00000566009 BPNT1O95861 308 aa5.75□□□□□ -1.49
SMPD3-206ENST00000566009 RLN2P04090 185 aa5.75□□□□□ -1.49
SMPD3-206ENST00000566009 FGF2P09038 288 aa5.75□□□□□ -1.49
SMPD3-206ENST00000566009 TNFSF8P32971 234 aa5.75□□□□□ -1.49
SMPD3-206ENST00000566009 EIF4EBP1Q13541 118 aaPredicted RBP5.75□□□□□ -1.49
SMPD3-206ENST00000566009 INSL4Q14641 139 aa5.75□□□□□ -1.49
SMPD3-206ENST00000566009 C1orf100Q5SVJ3 147 aa5.75□□□□□ -1.49
SMPD3-206ENST00000566009 SIGLEC15Q6ZMC9 328 aa5.75□□□□□ -1.49
SMPD3-206ENST00000566009 NEGR1Q7Z3B1 354 aa5.75□□□□□ -1.49
SMPD3-206ENST00000566009 BAP18Q8IXM2 172 aa5.75□□□□□ -1.49
SMPD3-206ENST00000566009 NKAIN3Q8N8D7 197 aa5.75□□□□□ -1.49
SMPD3-206ENST00000566009 COQ8AQ8NI60 647 aa5.75□□□□□ -1.49
SMPD3-206ENST00000566009 PHYHIPQ92561 330 aa5.75□□□□□ -1.49
SMPD3-206ENST00000566009 TM2D2Q9BX73 214 aa5.75□□□□□ -1.49
SMPD3-206ENST00000566009 TMEM59Q9BXS4 323 aa5.75□□□□□ -1.49
SMPD3-206ENST00000566009 CCDC90BQ9GZT6 254 aa5.75□□□□□ -1.49
SMPD3-206ENST00000566009 LSM2Q9Y333 95 aaKnown RBP5.75□□□□□ -1.49
SMPD3-206ENST00000566009 ZNF324O75467 553 aaPredicted RBP5.74□□□□□ -1.49
SMPD3-206ENST00000566009 DIRAS3O95661 229 aa5.74□□□□□ -1.49
SMPD3-206ENST00000566009 HNRNPCP07910 306 aaKnown RBP eCLIP5.74□□□□□ -1.49
SMPD3-206ENST00000566009 UBBP0CG47 229 aa5.74□□□□□ -1.49
SMPD3-206ENST00000566009 HSMCR30P0CW71 290 aa5.74□□□□□ -1.49
SMPD3-206ENST00000566009 ID1P41134 155 aa5.74□□□□□ -1.49
SMPD3-206ENST00000566009 HSPA13P48723 471 aa5.74□□□□□ -1.49
SMPD3-206ENST00000566009 PRCDQ00LT1 54 aa5.74□□□□□ -1.49
SMPD3-206ENST00000566009 TRAM1Q15629 374 aa5.74□□□□□ -1.49
SMPD3-206ENST00000566009 TBCEQ15813 527 aaPredicted RBP5.74□□□□□ -1.49
SMPD3-206ENST00000566009 POU2AF1Q16633 256 aa5.74□□□□□ -1.49
SMPD3-206ENST00000566009 HSD17B12Q53GQ0 312 aa5.74□□□□□ -1.49
SMPD3-206ENST00000566009 C9orf47Q6ZRZ4 202 aa5.74□□□□□ -1.49
SMPD3-206ENST00000566009 PRSS48Q7RTY5 328 aa5.74□□□□□ -1.49
SMPD3-206ENST00000566009 TMEM263Q8WUH6 116 aaKnown RBP5.74□□□□□ -1.49
SMPD3-206ENST00000566009 UFD1Q92890 307 aa5.74□□□□□ -1.49
SMPD3-206ENST00000566009 TMEM203Q969S6 136 aa5.74□□□□□ -1.49
SMPD3-206ENST00000566009 WDR12Q9GZL7 423 aaKnown RBP5.74□□□□□ -1.49
SMPD3-206ENST00000566009 TMEM140Q9NV12 185 aa5.74□□□□□ -1.49
SMPD3-206ENST00000566009 DOK5Q9P104 306 aa5.74□□□□□ -1.49
SMPD3-206ENST00000566009 KLK11Q9UBX7 282 aa5.74□□□□□ -1.49
SMPD3-206ENST00000566009 TRAV12-2A0A075B6T6 113 aa5.73□□□□□ -1.49
SMPD3-206ENST00000566009 A0A0B4J293 547 aa5.73□□□□□ -1.49
SMPD3-206ENST00000566009 TMEM14DPA8MWL7 114 aa5.73□□□□□ -1.49
SMPD3-206ENST00000566009 UCHL1P09936 223 aa5.73□□□□□ -1.49
SMPD3-206ENST00000566009 SMIM18P0DKX4 95 aa5.73□□□□□ -1.49
SMPD3-206ENST00000566009 RANBP1P43487 201 aa5.73□□□□□ -1.49
SMPD3-206ENST00000566009 PSMB3P49720 205 aa5.73□□□□□ -1.49
SMPD3-206ENST00000566009 TAS2R31P59538 309 aa5.73□□□□□ -1.49
SMPD3-206ENST00000566009 MLLT11Q13015 90 aaPredicted RBP5.73□□□□□ -1.49
SMPD3-206ENST00000566009 MRPL23Q16540 153 aaKnown RBP5.73□□□□□ -1.49
SMPD3-206ENST00000566009 FFAR4Q5NUL3 377 aa5.73□□□□□ -1.49
SMPD3-206ENST00000566009 TMEM91Q6ZNR0 172 aa5.73□□□□□ -1.49
SMPD3-206ENST00000566009 GPR141Q7Z602 305 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms