RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 WDR61Q9GZS3 305 aaKnown RBP9.9□□□□□ -0.82
SF3B3-206ENST00000565990 MAGT1Q9H0U3 335 aa9.9□□□□□ -0.82
SF3B3-206ENST00000565990 NDUFA4L2Q9NRX3 87 aa9.9□□□□□ -0.82
SF3B3-206ENST00000565990 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.9□□□□□ -0.82
SF3B3-206ENST00000565990 FOXA2Q9Y261 457 aaPredicted RBP9.9□□□□□ -0.82
SF3B3-206ENST00000565990 COL6A5A8TX70 2615 aa9.89□□□□□ -0.83
SF3B3-206ENST00000565990 C15orf61A6NNL5 157 aa9.89□□□□□ -0.83
SF3B3-206ENST00000565990 TEX22C9J3V5 150 aa9.89□□□□□ -0.83
SF3B3-206ENST00000565990 IGLV1-40P01703 118 aa9.89□□□□□ -0.83
SF3B3-206ENST00000565990 OR13C7P0DN81 318 aa9.89□□□□□ -0.83
SF3B3-206ENST00000565990 MYOD1P15172 320 aa9.89□□□□□ -0.83
SF3B3-206ENST00000565990 HSPE1P61604 102 aaKnown RBP9.89□□□□□ -0.83
SF3B3-206ENST00000565990 TMEM267Q0VDI3 215 aaPredicted RBP9.89□□□□□ -0.83
SF3B3-206ENST00000565990 IZUMO4Q1ZYL8 232 aa9.89□□□□□ -0.83
SF3B3-206ENST00000565990 KLK9Q2XQG4 91 aa9.89□□□□□ -0.83
SF3B3-206ENST00000565990 TMEM95Q3KNT9 176 aa9.89□□□□□ -0.83
SF3B3-206ENST00000565990 ASPHD1Q5U4P2 390 aa9.89□□□□□ -0.83
SF3B3-206ENST00000565990 OR5B3Q8NH48 314 aa9.89□□□□□ -0.83
SF3B3-206ENST00000565990 OR52E5Q8NH55 327 aa9.89□□□□□ -0.83
SF3B3-206ENST00000565990 MDFIQ99750 246 aa9.89□□□□□ -0.83
SF3B3-206ENST00000565990 SRSF8Q9BRL6 282 aaKnown RBP9.89□□□□□ -0.83
SF3B3-206ENST00000565990 TMEM147Q9BVK8 224 aa9.89□□□□□ -0.83
SF3B3-206ENST00000565990 COMMD5Q9GZQ3 224 aa9.89□□□□□ -0.83
SF3B3-206ENST00000565990 TMPRSS5Q9H3S3 457 aa9.89□□□□□ -0.83
SF3B3-206ENST00000565990 VAX2Q9UIW0 290 aa9.89□□□□□ -0.83
SF3B3-206ENST00000565990 KLK9Q9UKQ9 250 aa9.89□□□□□ -0.83
SF3B3-206ENST00000565990 OR51B2Q9Y5P1 312 aa9.89□□□□□ -0.83
SF3B3-206ENST00000565990 TRAV41A0A0B4J266 112 aa9.88□□□□□ -0.83
SF3B3-206ENST00000565990 INS-IGF2F8WCM5 200 aa9.88□□□□□ -0.83
SF3B3-206ENST00000565990 G3V318 75 aa9.88□□□□□ -0.83
SF3B3-206ENST00000565990 TMEM250H0YL14 139 aa9.88□□□□□ -0.83
SF3B3-206ENST00000565990 EIF3GO75821 320 aaKnown RBP eCLIP9.88□□□□□ -0.83
SF3B3-206ENST00000565990 IGHG4P01861 327 aa9.88□□□□□ -0.83
SF3B3-206ENST00000565990 CRYGCP07315 174 aa9.88□□□□□ -0.83
SF3B3-206ENST00000565990 RPL27AP46776 148 aaKnown RBP9.88□□□□□ -0.83
SF3B3-206ENST00000565990 SNRPEP62304 92 aaKnown RBP9.88□□□□□ -0.83
SF3B3-206ENST00000565990 GNB1P62873 340 aa9.88□□□□□ -0.83
SF3B3-206ENST00000565990 TNFRSF9Q07011 255 aa9.88□□□□□ -0.83
SF3B3-206ENST00000565990 LILRB2Q8N423 598 aa9.88□□□□□ -0.83
SF3B3-206ENST00000565990 TTC9CQ8N5M4 171 aa9.88□□□□□ -0.83
SF3B3-206ENST00000565990 OR1L8Q8NGR8 309 aa9.88□□□□□ -0.83
SF3B3-206ENST00000565990 FAM103A1Q9BTL3 118 aaKnown RBP9.88□□□□□ -0.83
SF3B3-206ENST00000565990 QTRT1Q9BXR0 403 aaKnown RBP9.88□□□□□ -0.83
SF3B3-206ENST00000565990 MANBALQ9NQG1 85 aa9.88□□□□□ -0.83
SF3B3-206ENST00000565990 LINC00527Q9UJ94 153 aa9.88□□□□□ -0.83
SF3B3-206ENST00000565990 PUS1Q9Y606 427 aaKnown RBP eCLIP9.88□□□□□ -0.83
SF3B3-206ENST00000565990 ELOA3CA0A087WX78 387 aaPredicted RBP9.87□□□□□ -0.83
SF3B3-206ENST00000565990 OPN1MWP04001 364 aa9.87□□□□□ -0.83
SF3B3-206ENST00000565990 OPN1MW2P0DN77 364 aa9.87□□□□□ -0.83
SF3B3-206ENST00000565990 OPN1MW3P0DN78 364 aa9.87□□□□□ -0.83
SF3B3-206ENST00000565990 KRTAP10-3P60369 221 aa9.87□□□□□ -0.83
SF3B3-206ENST00000565990 CCL20P78556 96 aa9.87□□□□□ -0.83
SF3B3-206ENST00000565990 DLK1P80370 383 aa9.87□□□□□ -0.83
SF3B3-206ENST00000565990 SLC38A11Q08AI6 406 aa9.87□□□□□ -0.83
SF3B3-206ENST00000565990 VWC2Q2TAL6 325 aa9.87□□□□□ -0.83
SF3B3-206ENST00000565990 ARSJQ5FYB0 599 aaPredicted RBP9.87□□□□□ -0.83
SF3B3-206ENST00000565990 C10orf55Q5SWW7 151 aa9.87□□□□□ -0.83
SF3B3-206ENST00000565990 FAM24BQ8N5W8 94 aa9.87□□□□□ -0.83
SF3B3-206ENST00000565990 KLHDC1Q8N7A1 406 aa9.87□□□□□ -0.83
SF3B3-206ENST00000565990 TMEM217Q8N7C4 229 aa9.87□□□□□ -0.83
SF3B3-206ENST00000565990 RNF152Q8N8N0 203 aa9.87□□□□□ -0.83
SF3B3-206ENST00000565990 BTF3L4Q96K17 158 aa9.87□□□□□ -0.83
SF3B3-206ENST00000565990 RARRES2Q99969 163 aa9.87□□□□□ -0.83
SF3B3-206ENST00000565990 TXNDC17Q9BRA2 123 aa9.87□□□□□ -0.83
SF3B3-206ENST00000565990 RPRMQ9NS64 109 aa9.87□□□□□ -0.83
SF3B3-206ENST00000565990 TRBV24-1A0A075B6N3 115 aa9.86□□□□□ -0.83
SF3B3-206ENST00000565990 CTXND1A0A1B0GTU2 59 aa9.86□□□□□ -0.83
SF3B3-206ENST00000565990 IGLC7A0M8Q6 106 aa9.86□□□□□ -0.83
SF3B3-206ENST00000565990 PSMB11A5LHX3 300 aa9.86□□□□□ -0.83
SF3B3-206ENST00000565990 MPDU1O75352 247 aa9.86□□□□□ -0.83
SF3B3-206ENST00000565990 HOXA5P20719 270 aa9.86□□□□□ -0.83
SF3B3-206ENST00000565990 S100PP25815 95 aa9.86□□□□□ -0.83
SF3B3-206ENST00000565990 SPCS3P61009 180 aa9.86□□□□□ -0.83
SF3B3-206ENST00000565990 RPP30P78346 268 aaKnown RBP9.86□□□□□ -0.83
SF3B3-206ENST00000565990 SLC35B1P78383 322 aa9.86□□□□□ -0.83
SF3B3-206ENST00000565990 PRCDQ00LT1 54 aa9.86□□□□□ -0.83
SF3B3-206ENST00000565990 RUNX1Q01196 453 aa9.86□□□□□ -0.83
SF3B3-206ENST00000565990 KIAA0141Q14154 515 aaPredicted RBP9.86□□□□□ -0.83
SF3B3-206ENST00000565990 TCTEX1D4Q5JR98 221 aa9.86□□□□□ -0.83
SF3B3-206ENST00000565990 FAM90A2PQ658T7 463 aa9.86□□□□□ -0.83
SF3B3-206ENST00000565990 TEX38Q6PEX7 206 aa9.86□□□□□ -0.83
SF3B3-206ENST00000565990 UNQ5815/PRO19632Q6UWF5 114 aa9.86□□□□□ -0.83
SF3B3-206ENST00000565990 ETV3LQ6ZN32 361 aa9.86□□□□□ -0.83
SF3B3-206ENST00000565990 ZNF329Q86UD4 541 aa9.86□□□□□ -0.83
SF3B3-206ENST00000565990 CYB561D1Q8N8Q1 229 aa9.86□□□□□ -0.83
SF3B3-206ENST00000565990 OR5AU1Q8NGC0 362 aa9.86□□□□□ -0.83
SF3B3-206ENST00000565990 C2CD4CQ8TF44 421 aa9.86□□□□□ -0.83
SF3B3-206ENST00000565990 WFDC12Q8WWY7 111 aa9.86□□□□□ -0.83
SF3B3-206ENST00000565990 GGACTQ9BVM4 153 aa9.86□□□□□ -0.83
SF3B3-206ENST00000565990 NPIPB5A8MRT5 1133 aa9.85□□□□□ -0.83
SF3B3-206ENST00000565990 C17orf112F2Z3M2 114 aa9.85□□□□□ -0.83
SF3B3-206ENST00000565990 ELANEP08246 267 aa9.85□□□□□ -0.83
SF3B3-206ENST00000565990 AREGP15514 252 aa9.85□□□□□ -0.83
SF3B3-206ENST00000565990 PSMB8P28062 276 aa9.85□□□□□ -0.83
SF3B3-206ENST00000565990 WT1-ASQ06250 92 aa9.85□□□□□ -0.83
SF3B3-206ENST00000565990 FABP9Q0Z7S8 132 aa9.85□□□□□ -0.83
SF3B3-206ENST00000565990 FOXE3Q13461 319 aa9.85□□□□□ -0.83
SF3B3-206ENST00000565990 ELOBQ15370 118 aa9.85□□□□□ -0.83
SF3B3-206ENST00000565990 HAGHQ16775 308 aa9.85□□□□□ -0.83
SF3B3-206ENST00000565990 C10orf99Q6UWK7 81 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms