RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 Q8N2B8 174 aa14.91□□□□□ -0.02
CSPG4P13-201ENST00000565545 CXorf58Q96LI9 332 aa14.91□□□□□ -0.02
CSPG4P13-201ENST00000565545 ZNF355PQ9NSJ1 428 aa14.91□□□□□ -0.02
CSPG4P13-201ENST00000565545 SLC45A2Q9UMX9 530 aa14.91□□□□□ -0.02
CSPG4P13-201ENST00000565545 RFNGQ9Y644 331 aa14.91□□□□□ -0.02
CSPG4P13-201ENST00000565545 IGKV1OR2-108A0A075B7D4 117 aa14.9□□□□□ -0.02
CSPG4P13-201ENST00000565545 TCRBV4S1A1TA0A5B7 111 aa14.9□□□□□ -0.02
CSPG4P13-201ENST00000565545 FAM223BA6NKX1 122 aa14.9□□□□□ -0.02
CSPG4P13-201ENST00000565545 ZFP92A6NM28 416 aa14.9□□□□□ -0.02
CSPG4P13-201ENST00000565545 CLN5O75503 358 aa14.9□□□□□ -0.02
CSPG4P13-201ENST00000565545 SCGB2A1O75556 95 aa14.9□□□□□ -0.02
CSPG4P13-201ENST00000565545 NDUFB8O95169 186 aa14.9□□□□□ -0.02
CSPG4P13-201ENST00000565545 ACOT6Q3I5F7 207 aaPredicted RBP14.9□□□□□ -0.02
CSPG4P13-201ENST00000565545 FFAR4Q5NUL3 377 aa14.9□□□□□ -0.02
CSPG4P13-201ENST00000565545 FAM223AQ8IWN6 122 aa14.9□□□□□ -0.02
CSPG4P13-201ENST00000565545 ATP6V0BQ99437 205 aa14.9□□□□□ -0.02
CSPG4P13-201ENST00000565545 ZNF702PQ9H963 129 aa14.9□□□□□ -0.02
CSPG4P13-201ENST00000565545 GAR1Q9NY12 217 aaKnown RBP14.9□□□□□ -0.02
CSPG4P13-201ENST00000565545 MRPL36Q9P0J6 103 aaKnown RBP14.9□□□□□ -0.02
CSPG4P13-201ENST00000565545 PXMP4Q9Y6I8 212 aa14.9□□□□□ -0.02
CSPG4P13-201ENST00000565545 FABP1P07148 127 aa14.89□□□□□ -0.03
CSPG4P13-201ENST00000565545 RHOGP84095 191 aa14.89□□□□□ -0.03
CSPG4P13-201ENST00000565545 PRR20EP86478 221 aa14.89□□□□□ -0.03
CSPG4P13-201ENST00000565545 PRR20CP86479 221 aa14.89□□□□□ -0.03
CSPG4P13-201ENST00000565545 PRR20DP86480 221 aa14.89□□□□□ -0.03
CSPG4P13-201ENST00000565545 PRR20BP86481 221 aa14.89□□□□□ -0.03
CSPG4P13-201ENST00000565545 PRR20AP86496 221 aa14.89□□□□□ -0.03
CSPG4P13-201ENST00000565545 CFHR3Q02985 330 aa14.89□□□□□ -0.03
CSPG4P13-201ENST00000565545 CYP2G1PQ6ZSU1 146 aa14.89□□□□□ -0.03
CSPG4P13-201ENST00000565545 SLC39A9Q9NUM3 307 aa14.89□□□□□ -0.03
CSPG4P13-201ENST00000565545 C21orf62Q9NYP8 219 aa14.89□□□□□ -0.03
CSPG4P13-201ENST00000565545 LINC00527Q9UJ94 153 aa14.89□□□□□ -0.03
CSPG4P13-201ENST00000565545 IGKV1D-37A0A075B6S9 117 aa14.88□□□□□ -0.03
CSPG4P13-201ENST00000565545 IGHV3-21A0A0B4J1V1 117 aa14.88□□□□□ -0.03
CSPG4P13-201ENST00000565545 IGLV1-40P01703 118 aa14.88□□□□□ -0.03
CSPG4P13-201ENST00000565545 IGHV3-48P01763 117 aa14.88□□□□□ -0.03
CSPG4P13-201ENST00000565545 RNASE1P07998 156 aaKnown RBP14.88□□□□□ -0.03
CSPG4P13-201ENST00000565545 M6PRP20645 277 aa14.88□□□□□ -0.03
CSPG4P13-201ENST00000565545 B2MP61769 119 aa14.88□□□□□ -0.03
CSPG4P13-201ENST00000565545 AWAT1Q58HT5 328 aa14.88□□□□□ -0.03
CSPG4P13-201ENST00000565545 MIC13Q5XKP0 118 aa14.88□□□□□ -0.03
CSPG4P13-201ENST00000565545 Q6ZRG5 221 aa14.88□□□□□ -0.03
CSPG4P13-201ENST00000565545 STPG3Q8N7X2 389 aa14.88□□□□□ -0.03
CSPG4P13-201ENST00000565545 USMG5Q96IX5 58 aa14.88□□□□□ -0.03
CSPG4P13-201ENST00000565545 NOL4LQ96MY1 436 aaPredicted RBP14.88□□□□□ -0.03
CSPG4P13-201ENST00000565545 RPRMQ9NS64 109 aa14.88□□□□□ -0.03
CSPG4P13-201ENST00000565545 MED9Q9NWA0 146 aa14.88□□□□□ -0.03
CSPG4P13-201ENST00000565545 LINC00862A6NCI5 91 aa14.87□□□□□ -0.03
CSPG4P13-201ENST00000565545 LINC00869P0C866 280 aa14.87□□□□□ -0.03
CSPG4P13-201ENST00000565545 ELLP55199 621 aaPredicted RBP14.87□□□□□ -0.03
CSPG4P13-201ENST00000565545 SLC35B1P78383 322 aa14.87□□□□□ -0.03
CSPG4P13-201ENST00000565545 ATP5G2Q06055 141 aa14.87□□□□□ -0.03
CSPG4P13-201ENST00000565545 C15orf32Q32M92 178 aa14.87□□□□□ -0.03
CSPG4P13-201ENST00000565545 FAM213BQ8TBF2 198 aa14.87□□□□□ -0.03
CSPG4P13-201ENST00000565545 DUX5Q96PT3 197 aa14.87□□□□□ -0.03
CSPG4P13-201ENST00000565545 TRBV7-1A0A0A6YYK4 115 aa14.86□□□□□ -0.03
CSPG4P13-201ENST00000565545 GNG7O60262 68 aa14.86□□□□□ -0.03
CSPG4P13-201ENST00000565545 TRGV3P03979 118 aa14.86□□□□□ -0.03
CSPG4P13-201ENST00000565545 IGLC1P0CG04 106 aa14.86□□□□□ -0.03
CSPG4P13-201ENST00000565545 PXDC1Q5TGL8 231 aa14.86□□□□□ -0.03
CSPG4P13-201ENST00000565545 BPIFCQ8NFQ6 507 aa14.86□□□□□ -0.03
CSPG4P13-201ENST00000565545 OR10G4Q8NGN3 311 aa14.86□□□□□ -0.03
CSPG4P13-201ENST00000565545 OR10G9Q8NGN4 311 aa14.86□□□□□ -0.03
CSPG4P13-201ENST00000565545 OR10G7Q8NGN6 311 aa14.86□□□□□ -0.03
CSPG4P13-201ENST00000565545 PCNPQ8WW12 178 aaKnown RBP14.86□□□□□ -0.03
CSPG4P13-201ENST00000565545 EEF1AKMT3Q96AZ1 226 aa14.86□□□□□ -0.03
CSPG4P13-201ENST00000565545 ACTR3CQ9C0K3 210 aaPredicted RBP14.86□□□□□ -0.03
CSPG4P13-201ENST00000565545 ESM1Q9NQ30 184 aa14.86□□□□□ -0.03
CSPG4P13-201ENST00000565545 MFSD2BA6NFX1 497 aa14.85□□□□□ -0.03
CSPG4P13-201ENST00000565545 NUDT19A8MXV4 375 aa14.85□□□□□ -0.03
CSPG4P13-201ENST00000565545 TEX46H3BTG2 121 aa14.85□□□□□ -0.03
CSPG4P13-201ENST00000565545 YIF1AO95070 293 aa14.85□□□□□ -0.03
CSPG4P13-201ENST00000565545 IGHG4P01861 327 aa14.85□□□□□ -0.03
CSPG4P13-201ENST00000565545 RAB2AP61019 212 aa14.85□□□□□ -0.03
CSPG4P13-201ENST00000565545 Q56UQ5 140 aa14.85□□□□□ -0.03
CSPG4P13-201ENST00000565545 LYPD6BQ8NI32 183 aa14.85□□□□□ -0.03
CSPG4P13-201ENST00000565545 ZNF502Q8TBZ5 544 aa14.85□□□□□ -0.03
CSPG4P13-201ENST00000565545 MS4A10Q96PG2 267 aa14.85□□□□□ -0.03
CSPG4P13-201ENST00000565545 VSIRQ9H7M9 311 aa14.85□□□□□ -0.03
CSPG4P13-201ENST00000565545 PFDN2Q9UHV9 154 aa14.85□□□□□ -0.03
CSPG4P13-201ENST00000565545 A0A0G2JLM5 398 aa14.84□□□□□ -0.03
CSPG4P13-201ENST00000565545 FAM181BA6NEQ2 426 aa14.84□□□□□ -0.03
CSPG4P13-201ENST00000565545 HBE1P02100 147 aa14.84□□□□□ -0.03
CSPG4P13-201ENST00000565545 CRYBA1P05813 215 aa14.84□□□□□ -0.03
CSPG4P13-201ENST00000565545 H2AFB1P0C5Y9 115 aa14.84□□□□□ -0.03
CSPG4P13-201ENST00000565545 FHITP49789 147 aa14.84□□□□□ -0.03
CSPG4P13-201ENST00000565545 TPPP2P59282 170 aa14.84□□□□□ -0.03
CSPG4P13-201ENST00000565545 YPEL3P61236 119 aaPredicted RBP14.84□□□□□ -0.03
CSPG4P13-201ENST00000565545 ZNF616Q08AN1 781 aa14.84□□□□□ -0.03
CSPG4P13-201ENST00000565545 RPP25LQ8N5L8 163 aaKnown RBP14.84□□□□□ -0.03
CSPG4P13-201ENST00000565545 MBD3L1Q8WWY6 194 aa14.84□□□□□ -0.03
CSPG4P13-201ENST00000565545 RNF2Q99496 336 aa14.84□□□□□ -0.03
CSPG4P13-201ENST00000565545 TRAV1-1A0A0B4J248 108 aa14.83□□□□□ -0.04
CSPG4P13-201ENST00000565545 CTXND1A0A1B0GTU2 59 aa14.83□□□□□ -0.04
CSPG4P13-201ENST00000565545 SEC14L6B5MCN3 397 aa14.83□□□□□ -0.04
CSPG4P13-201ENST00000565545 F8W735 103 aaPredicted RBP14.83□□□□□ -0.04
CSPG4P13-201ENST00000565545 IGKV1-17P01599 117 aa14.83□□□□□ -0.04
CSPG4P13-201ENST00000565545 ELANEP08246 267 aa14.83□□□□□ -0.04
CSPG4P13-201ENST00000565545 PF4V1P10720 104 aa14.83□□□□□ -0.04
CSPG4P13-201ENST00000565545 ZNF90Q03938 601 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms