RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 CXorf58Q96LI9 332 aa8.62□□□□□ -1.03
SF3B3-205ENST00000564899 NPCDR1Q9BY65 106 aa8.62□□□□□ -1.03
SF3B3-205ENST00000564899 SH3BGRL3Q9H299 93 aa8.62□□□□□ -1.03
SF3B3-205ENST00000564899 KLK15Q9H2R5 256 aa8.62□□□□□ -1.03
SF3B3-205ENST00000564899 LSM4Q9Y4Z0 139 aaKnown RBP8.62□□□□□ -1.03
SF3B3-205ENST00000564899 ZFP92A6NM28 416 aa8.61□□□□□ -1.03
SF3B3-205ENST00000564899 C17orf112F2Z3M2 114 aa8.61□□□□□ -1.03
SF3B3-205ENST00000564899 CLN5O75503 358 aa8.61□□□□□ -1.03
SF3B3-205ENST00000564899 CFDP00746 253 aaPredicted RBP8.61□□□□□ -1.03
SF3B3-205ENST00000564899 ELANEP08246 267 aa8.61□□□□□ -1.03
SF3B3-205ENST00000564899 PSMB8P28062 276 aa8.61□□□□□ -1.03
SF3B3-205ENST00000564899 NPBWR1P48145 328 aa8.61□□□□□ -1.03
SF3B3-205ENST00000564899 CAMLGP49069 296 aa8.61□□□□□ -1.03
SF3B3-205ENST00000564899 RAB9AP51151 201 aa8.61□□□□□ -1.03
SF3B3-205ENST00000564899 FOXE3Q13461 319 aa8.61□□□□□ -1.03
SF3B3-205ENST00000564899 RAB31Q13636 194 aa8.61□□□□□ -1.03
SF3B3-205ENST00000564899 Q56UQ5 140 aa8.61□□□□□ -1.03
SF3B3-205ENST00000564899 EIF5AL1Q6IS14 154 aaKnown RBP8.61□□□□□ -1.03
SF3B3-205ENST00000564899 LCNL1Q6ZST4 164 aa8.61□□□□□ -1.03
SF3B3-205ENST00000564899 COMMD1Q8N668 190 aa8.61□□□□□ -1.03
SF3B3-205ENST00000564899 ZNF709Q8N972 641 aa8.61□□□□□ -1.03
SF3B3-205ENST00000564899 THAP8Q8NA92 274 aa8.61□□□□□ -1.03
SF3B3-205ENST00000564899 OR4F5Q8NH21 305 aa8.61□□□□□ -1.03
SF3B3-205ENST00000564899 LINC01006Q8NI28 216 aa8.61□□□□□ -1.03
SF3B3-205ENST00000564899 ZNF502Q8TBZ5 544 aa8.61□□□□□ -1.03
SF3B3-205ENST00000564899 USMG5Q96IX5 58 aa8.61□□□□□ -1.03
SF3B3-205ENST00000564899 MGST2Q99735 147 aa8.61□□□□□ -1.03
SF3B3-205ENST00000564899 RSG1Q9BU20 258 aa8.61□□□□□ -1.03
SF3B3-205ENST00000564899 GGTLC1Q9BX51 225 aa8.61□□□□□ -1.03
SF3B3-205ENST00000564899 SLC25A32Q9H2D1 315 aa8.61□□□□□ -1.03
SF3B3-205ENST00000564899 IGKV1OR2-108A0A075B7D4 117 aa8.6□□□□□ -1.03
SF3B3-205ENST00000564899 A0A0G2JLM5 398 aa8.6□□□□□ -1.03
SF3B3-205ENST00000564899 AGPAT2O15120 278 aa8.6□□□□□ -1.03
SF3B3-205ENST00000564899 GNG7O60262 68 aa8.6□□□□□ -1.03
SF3B3-205ENST00000564899 SPP1P10451 314 aa8.6□□□□□ -1.03
SF3B3-205ENST00000564899 OR10J1P30954 320 aa8.6□□□□□ -1.03
SF3B3-205ENST00000564899 FCGR2BP31994 310 aaPredicted RBP8.6□□□□□ -1.03
SF3B3-205ENST00000564899 IFITM2Q01629 132 aa8.6□□□□□ -1.03
SF3B3-205ENST00000564899 TEX261Q6UWH6 196 aa8.6□□□□□ -1.03
SF3B3-205ENST00000564899 ALKAL2Q6UX46 152 aa8.6□□□□□ -1.03
SF3B3-205ENST00000564899 KLHDC1Q8N7A1 406 aa8.6□□□□□ -1.03
SF3B3-205ENST00000564899 OR2G3Q8NGZ4 309 aa8.6□□□□□ -1.03
SF3B3-205ENST00000564899 TMED6Q8WW62 240 aa8.6□□□□□ -1.03
SF3B3-205ENST00000564899 PHYHIPLQ96FC7 376 aa8.6□□□□□ -1.03
SF3B3-205ENST00000564899 TXN2Q99757 166 aa8.6□□□□□ -1.03
SF3B3-205ENST00000564899 PSMG3Q9BT73 122 aaPredicted RBP8.6□□□□□ -1.03
SF3B3-205ENST00000564899 KCNIP2Q9NS61 270 aa8.6□□□□□ -1.03
SF3B3-205ENST00000564899 TIMM9Q9Y5J7 89 aa8.6□□□□□ -1.03
SF3B3-205ENST00000564899 IGKV1D-37A0A075B6S9 117 aa8.59□□□□□ -1.03
SF3B3-205ENST00000564899 TRAV30A0A087WSZ9 112 aa8.59□□□□□ -1.03
SF3B3-205ENST00000564899 TRBV7-1A0A0A6YYK4 115 aa8.59□□□□□ -1.03
SF3B3-205ENST00000564899 TCRBV4S1A1TA0A5B7 111 aa8.59□□□□□ -1.03
SF3B3-205ENST00000564899 OR2T8A6NH00 312 aa8.59□□□□□ -1.03
SF3B3-205ENST00000564899 F8W735 103 aaPredicted RBP8.59□□□□□ -1.03
SF3B3-205ENST00000564899 SCGB2A1O75556 95 aa8.59□□□□□ -1.03
SF3B3-205ENST00000564899 IFNA7P01567 189 aa8.59□□□□□ -1.03
SF3B3-205ENST00000564899 SEC11BP0C7V7 166 aa8.59□□□□□ -1.03
SF3B3-205ENST00000564899 IGLC1P0CG04 106 aa8.59□□□□□ -1.03
SF3B3-205ENST00000564899 GPR183P32249 361 aa8.59□□□□□ -1.03
SF3B3-205ENST00000564899 TMEM182Q6ZP80 229 aaPredicted RBP8.59□□□□□ -1.03
SF3B3-205ENST00000564899 CYP2G1PQ6ZSU1 146 aa8.59□□□□□ -1.03
SF3B3-205ENST00000564899 RNF152Q8N8N0 203 aa8.59□□□□□ -1.03
SF3B3-205ENST00000564899 ZNF680Q8NEM1 530 aa8.59□□□□□ -1.03
SF3B3-205ENST00000564899 OR5AU1Q8NGC0 362 aa8.59□□□□□ -1.03
SF3B3-205ENST00000564899 OR4X2Q8NGF9 303 aa8.59□□□□□ -1.03
SF3B3-205ENST00000564899 CCDC140Q96MF4 163 aa8.59□□□□□ -1.03
SF3B3-205ENST00000564899 TRGV9Q99603 122 aa8.59□□□□□ -1.03
SF3B3-205ENST00000564899 GAR1Q9NY12 217 aaKnown RBP8.59□□□□□ -1.03
SF3B3-205ENST00000564899 RFNGQ9Y644 331 aa8.59□□□□□ -1.03
SF3B3-205ENST00000564899 PXMP4Q9Y6I8 212 aa8.59□□□□□ -1.03
SF3B3-205ENST00000564899 DNAH3Q8TD57 4116 aa8.58□□□□□ -1.04
SF3B3-205ENST00000564899 CLPSL1A2RUU4 121 aa8.58□□□□□ -1.04
SF3B3-205ENST00000564899 TSPAN15O95858 294 aa8.58□□□□□ -1.04
SF3B3-205ENST00000564899 IGHV3-11P01762 117 aa8.58□□□□□ -1.04
SF3B3-205ENST00000564899 RPLP1P05386 114 aaKnown RBP8.58□□□□□ -1.04
SF3B3-205ENST00000564899 FABP1P07148 127 aa8.58□□□□□ -1.04
SF3B3-205ENST00000564899 RPL29P47914 159 aaKnown RBP8.58□□□□□ -1.04
SF3B3-205ENST00000564899 ELLP55199 621 aaPredicted RBP8.58□□□□□ -1.04
SF3B3-205ENST00000564899 B2MP61769 119 aa8.58□□□□□ -1.04
SF3B3-205ENST00000564899 ZNF90Q03938 601 aa8.58□□□□□ -1.04
SF3B3-205ENST00000564899 TIGITQ495A1 244 aa8.58□□□□□ -1.04
SF3B3-205ENST00000564899 FFAR4Q5NUL3 377 aa8.58□□□□□ -1.04
SF3B3-205ENST00000564899 FAM74A1Q5RGS3 127 aa8.58□□□□□ -1.04
SF3B3-205ENST00000564899 MIC13Q5XKP0 118 aa8.58□□□□□ -1.04
SF3B3-205ENST00000564899 CLEC19AQ6UXS0 136 aa8.58□□□□□ -1.04
SF3B3-205ENST00000564899 STPG3Q8N7X2 389 aa8.58□□□□□ -1.04
SF3B3-205ENST00000564899 MYOZ3Q8TDC0 251 aa8.58□□□□□ -1.04
SF3B3-205ENST00000564899 ATP6V0BQ99437 205 aa8.58□□□□□ -1.04
SF3B3-205ENST00000564899 UBQLN2Q9UHD9 624 aa8.58□□□□□ -1.04
SF3B3-205ENST00000564899 SLC45A2Q9UMX9 530 aa8.58□□□□□ -1.04
SF3B3-205ENST00000564899 RNF114Q9Y508 228 aa8.58□□□□□ -1.04
SF3B3-205ENST00000564899 NUPL2O15504 423 aaKnown RBP8.57□□□□□ -1.04
SF3B3-205ENST00000564899 TGOLN2O43493 480 aa8.57□□□□□ -1.04
SF3B3-205ENST00000564899 IGKV1-17P01599 117 aa8.57□□□□□ -1.04
SF3B3-205ENST00000564899 CLEC3BP05452 202 aa8.57□□□□□ -1.04
SF3B3-205ENST00000564899 GATA2P23769 480 aaPredicted RBP8.57□□□□□ -1.04
SF3B3-205ENST00000564899 SELENOTP62341 195 aa8.57□□□□□ -1.04
SF3B3-205ENST00000564899 SERF2P84101 59 aa8.57□□□□□ -1.04
SF3B3-205ENST00000564899 PRR20EP86478 221 aa8.57□□□□□ -1.04
SF3B3-205ENST00000564899 PRR20CP86479 221 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms