RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 RCL1Q9Y2P8 373 aaKnown RBP12.15□□□□□ -0.46
RAB40C-208ENST00000564703 TRAV14DV4A0A0A6YYC5 116 aa12.14□□□□□ -0.47
RAB40C-208ENST00000564703 TSC22D2O75157 780 aa12.14□□□□□ -0.47
RAB40C-208ENST00000564703 FABP1P07148 127 aa12.14□□□□□ -0.47
RAB40C-208ENST00000564703 BCAP31P51572 246 aa12.14□□□□□ -0.47
RAB40C-208ENST00000564703 GAMTQ14353 236 aa12.14□□□□□ -0.47
RAB40C-208ENST00000564703 DEFB121Q5J5C9 76 aa12.14□□□□□ -0.47
RAB40C-208ENST00000564703 LCN12Q6JVE5 192 aa12.14□□□□□ -0.47
RAB40C-208ENST00000564703 OR10P1Q8NGE3 313 aa12.14□□□□□ -0.47
RAB40C-208ENST00000564703 OR2K2Q8NGT1 345 aa12.14□□□□□ -0.47
RAB40C-208ENST00000564703 AURKAIP1Q9NWT8 199 aaPredicted RBP12.14□□□□□ -0.47
RAB40C-208ENST00000564703 PUS1Q9Y606 427 aaKnown RBP eCLIP12.14□□□□□ -0.47
RAB40C-208ENST00000564703 IGHV3OR16-8A0A075B7F1 116 aa12.13□□□□□ -0.47
RAB40C-208ENST00000564703 TMEM213A2RRL7 107 aa12.13□□□□□ -0.47
RAB40C-208ENST00000564703 C7orf66A4D0T2 115 aa12.13□□□□□ -0.47
RAB40C-208ENST00000564703 ZFP92A6NM28 416 aa12.13□□□□□ -0.47
RAB40C-208ENST00000564703 K7EPK0 472 aa12.13□□□□□ -0.47
RAB40C-208ENST00000564703 ZNF207O43670 478 aaKnown RBP12.13□□□□□ -0.47
RAB40C-208ENST00000564703 SIX6O95475 246 aa12.13□□□□□ -0.47
RAB40C-208ENST00000564703 BMI1P35226 326 aa12.13□□□□□ -0.47
RAB40C-208ENST00000564703 YPEL3P61236 119 aaPredicted RBP12.13□□□□□ -0.47
RAB40C-208ENST00000564703 DEFB114Q30KQ6 69 aa12.13□□□□□ -0.47
RAB40C-208ENST00000564703 TIGITQ495A1 244 aa12.13□□□□□ -0.47
RAB40C-208ENST00000564703 OR8G2PQ6IF36 304 aa12.13□□□□□ -0.47
RAB40C-208ENST00000564703 TOMM20LQ6UXN7 152 aa12.13□□□□□ -0.47
RAB40C-208ENST00000564703 HAPLN4Q86UW8 402 aa12.13□□□□□ -0.47
RAB40C-208ENST00000564703 IGLC1P0CG04 106 aa12.12□□□□□ -0.47
RAB40C-208ENST00000564703 RD3LP0DJH9 198 aa12.12□□□□□ -0.47
RAB40C-208ENST00000564703 C8orf88P0DMB2 117 aa12.12□□□□□ -0.47
RAB40C-208ENST00000564703 GP9P14770 177 aa12.12□□□□□ -0.47
RAB40C-208ENST00000564703 NPPCP23582 126 aa12.12□□□□□ -0.47
RAB40C-208ENST00000564703 CAV2P51636 162 aa12.12□□□□□ -0.47
RAB40C-208ENST00000564703 PAX9P55771 341 aa12.12□□□□□ -0.47
RAB40C-208ENST00000564703 RAB32Q13637 225 aa12.12□□□□□ -0.47
RAB40C-208ENST00000564703 RBPMS2Q6ZRY4 209 aaKnown RBP12.12□□□□□ -0.47
RAB40C-208ENST00000564703 MRAPQ8TCY5 172 aa12.12□□□□□ -0.47
RAB40C-208ENST00000564703 NARS2Q96I59 477 aaKnown RBP12.12□□□□□ -0.47
RAB40C-208ENST00000564703 PRR25Q96S07 402 aa12.12□□□□□ -0.47
RAB40C-208ENST00000564703 NMES1Q9C002 83 aa12.12□□□□□ -0.47
RAB40C-208ENST00000564703 MGAT4CQ9UBM8 478 aa12.12□□□□□ -0.47
RAB40C-208ENST00000564703 SCAF4O95104 1147 aaKnown RBP12.11□□□□□ -0.47
RAB40C-208ENST00000564703 IGKV1-17P01599 117 aa12.11□□□□□ -0.47
RAB40C-208ENST00000564703 METTL15P1P0C7V9 234 aa12.11□□□□□ -0.47
RAB40C-208ENST00000564703 IL15RAQ13261 267 aa12.11□□□□□ -0.47
RAB40C-208ENST00000564703 CD300EQ496F6 205 aaPredicted RBP12.11□□□□□ -0.47
RAB40C-208ENST00000564703 LAMTOR1Q6IAA8 161 aa12.11□□□□□ -0.47
RAB40C-208ENST00000564703 TMEM14EPQ6UXP3 125 aa12.11□□□□□ -0.47
RAB40C-208ENST00000564703 ADAMTSL5Q6ZMM2 481 aa12.11□□□□□ -0.47
RAB40C-208ENST00000564703 MED28Q9H204 178 aa12.11□□□□□ -0.47
RAB40C-208ENST00000564703 SMPXQ9UHP9 88 aa12.11□□□□□ -0.47
RAB40C-208ENST00000564703 ALG5Q9Y673 324 aa12.11□□□□□ -0.47
RAB40C-208ENST00000564703 WI2-2373I1.2A0A1W2PRP0 233 aa12.1□□□□□ -0.47
RAB40C-208ENST00000564703 SMCO3A2RU48 225 aa12.1□□□□□ -0.47
RAB40C-208ENST00000564703 AKR1C1Q04828 323 aa12.1□□□□□ -0.47
RAB40C-208ENST00000564703 GUCA2BQ16661 112 aa12.1□□□□□ -0.47
RAB40C-208ENST00000564703 METTL26Q96S19 204 aa12.1□□□□□ -0.47
RAB40C-208ENST00000564703 IGHV7-4-1A0A0J9YVY3 117 aa12.09□□□□□ -0.47
RAB40C-208ENST00000564703 A0A1W2PS18 150 aa12.09□□□□□ -0.47
RAB40C-208ENST00000564703 TOMM40O96008 361 aa12.09□□□□□ -0.47
RAB40C-208ENST00000564703 EDN2P20800 178 aa12.09□□□□□ -0.47
RAB40C-208ENST00000564703 LRRC37A5PQ49AS3 106 aa12.09□□□□□ -0.47
RAB40C-208ENST00000564703 BTNL8Q6UX41 500 aa12.09□□□□□ -0.47
RAB40C-208ENST00000564703 RHPN1-AS1Q9BWJ2 59 aa12.09□□□□□ -0.47
RAB40C-208ENST00000564703 MLXQ9UH92 298 aa12.09□□□□□ -0.47
RAB40C-208ENST00000564703 PFDN2Q9UHV9 154 aa12.09□□□□□ -0.47
RAB40C-208ENST00000564703 IGHV3-49A0A0A0MS15 119 aa12.08□□□□□ -0.48
RAB40C-208ENST00000564703 TRAV25A0A0B4J276 109 aa12.08□□□□□ -0.48
RAB40C-208ENST00000564703 FAM24AA6NFZ4 105 aa12.08□□□□□ -0.48
RAB40C-208ENST00000564703 PRSS46E5RG02 174 aa12.08□□□□□ -0.48
RAB40C-208ENST00000564703 CD5P06127 495 aa12.08□□□□□ -0.48
RAB40C-208ENST00000564703 PET100P0DJ07 73 aa12.08□□□□□ -0.48
RAB40C-208ENST00000564703 H2BFSP57053 126 aa12.08□□□□□ -0.48
RAB40C-208ENST00000564703 RRAS2P62070 204 aaPredicted RBP12.08□□□□□ -0.48
RAB40C-208ENST00000564703 DLK1P80370 383 aa12.08□□□□□ -0.48
RAB40C-208ENST00000564703 ACOT7LQ6ZUV0 252 aa12.08□□□□□ -0.48
RAB40C-208ENST00000564703 TMEM144Q7Z5S9 345 aa12.08□□□□□ -0.48
RAB40C-208ENST00000564703 GTSCR1Q86UQ5 136 aa12.08□□□□□ -0.48
RAB40C-208ENST00000564703 OR51G1Q8NGK1 321 aa12.08□□□□□ -0.48
RAB40C-208ENST00000564703 TRGV9Q99603 122 aa12.08□□□□□ -0.48
RAB40C-208ENST00000564703 TMEM231Q9H6L2 316 aa12.08□□□□□ -0.48
RAB40C-208ENST00000564703 NPVFQ9HCQ7 196 aa12.08□□□□□ -0.48
RAB40C-208ENST00000564703 SELENOKQ9Y6D0 94 aa12.08□□□□□ -0.48
RAB40C-208ENST00000564703 IZUMO1RA6ND01 250 aa12.07□□□□□ -0.48
RAB40C-208ENST00000564703 PMS2P5A8MQ11 134 aa12.07□□□□□ -0.48
RAB40C-208ENST00000564703 E5RGE8 158 aa12.07□□□□□ -0.48
RAB40C-208ENST00000564703 K7EIL1 84 aa12.07□□□□□ -0.48
RAB40C-208ENST00000564703 CHEK1O14757 476 aa12.07□□□□□ -0.48
RAB40C-208ENST00000564703 DEDDO75618 318 aa12.07□□□□□ -0.48
RAB40C-208ENST00000564703 CFDP00746 253 aaPredicted RBP12.07□□□□□ -0.48
RAB40C-208ENST00000564703 IL4P05112 153 aa12.07□□□□□ -0.48
RAB40C-208ENST00000564703 PSG1P11464 419 aa12.07□□□□□ -0.48
RAB40C-208ENST00000564703 OXA1LQ15070 435 aa12.07□□□□□ -0.48
RAB40C-208ENST00000564703 STX12Q86Y82 276 aa12.07□□□□□ -0.48
RAB40C-208ENST00000564703 GRAMD2BQ96HH9 432 aa12.07□□□□□ -0.48
RAB40C-208ENST00000564703 GGACTQ9BVM4 153 aa12.07□□□□□ -0.48
RAB40C-208ENST00000564703 SLC25A31Q9H0C2 315 aa12.07□□□□□ -0.48
RAB40C-208ENST00000564703 ZFAND3Q9H8U3 227 aa12.07□□□□□ -0.48
RAB40C-208ENST00000564703 LYRM2Q9NU23 88 aaPredicted RBP12.07□□□□□ -0.48
RAB40C-208ENST00000564703 IGHV3OR16-13A0A075B7E8 117 aa12.06□□□□□ -0.48
RAB40C-208ENST00000564703 IGHV3-74A0A0B4J1X5 117 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms