RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 TGIF2-C20orf24A0A0A6YYL0 155 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 HELTA6NFD8 242 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 LYNX1G3V0Z9 82 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 H7BYZ3 331 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 PPP1R2P9O14990 202 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 CRYGBP07316 175 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 OR5G3P0C626 314 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 LYNX1P0DP58 116 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 OR10J1P30954 320 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 RPL35P42766 123 aaKnown RBP5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 SELENOTP62341 195 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 GNB1P62873 340 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 WT1-ASQ06250 92 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 SLC16A13Q7RTY0 426 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 DTX2Q86UW9 622 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 ZNF114Q8NC26 417 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 OR51G1Q8NGK1 321 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 UHRF2Q96PU4 802 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 PRR25Q96S07 402 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 IMMP2LQ96T52 175 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 MRPL32Q9BYC8 188 aaKnown RBP5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 PRORYQ9H606 182 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 LY96Q9Y6Y9 160 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 IGHV1-3A0A0C4DH29 117 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 E7EUB6 86 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 M0R1W7 72 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 ENSAO43768 121 aaKnown RBP5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 NDUFB4O95168 129 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 C1QTNF9P0C862 333 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 GCSHP23434 173 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 SRP14P37108 136 aaKnown RBP5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 ATP5G3P48201 142 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 UBE2G2P60604 165 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 PAX2Q02962 417 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 FABP9Q0Z7S8 132 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 KIAA0141Q14154 515 aaPredicted RBP5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 CDSNQ15517 529 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 PRSS8Q16651 343 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 C16orf82Q7Z2V1 217 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 LINC01551Q86U37 167 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 THAP8Q8NA92 274 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 WIPF2Q8TF74 440 aaPredicted RBP5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 C11orf52Q96A22 123 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 MS4A10Q96PG2 267 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 C19orf73Q9NVV2 129 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 ABCA4P78363 2273 aa5.82□□□□□ -1.48
HERPUD1-209ENST00000564678 ANKHD1Q8IWZ3 2542 aaKnown RBP5.81□□□□□ -1.48
HERPUD1-209ENST00000564678 ZZEF1O43149 2961 aa5.81□□□□□ -1.48
HERPUD1-209ENST00000564678 A1L4Q6 167 aa5.81□□□□□ -1.48
HERPUD1-209ENST00000564678 ZNF98A6NK75 572 aa5.81□□□□□ -1.48
HERPUD1-209ENST00000564678 LY6LH3BQJ8 138 aa5.81□□□□□ -1.48
HERPUD1-209ENST00000564678 CORTO00230 105 aa5.81□□□□□ -1.48
HERPUD1-209ENST00000564678 C8orf88P0DMB2 117 aa5.81□□□□□ -1.48
HERPUD1-209ENST00000564678 HOXA5P20719 270 aa5.81□□□□□ -1.48
HERPUD1-209ENST00000564678 GALR1P47211 349 aa5.81□□□□□ -1.48
HERPUD1-209ENST00000564678 MRGPRG-AS1Q2M3A8 158 aa5.81□□□□□ -1.48
HERPUD1-209ENST00000564678 GAGE13Q4V321 117 aa5.81□□□□□ -1.48
HERPUD1-209ENST00000564678 OR11H6Q8NGC7 330 aa5.81□□□□□ -1.48
HERPUD1-209ENST00000564678 OR1L4Q8NGR5 311 aa5.81□□□□□ -1.48
HERPUD1-209ENST00000564678 RPEQ96AT9 228 aa5.81□□□□□ -1.48
HERPUD1-209ENST00000564678 PFDN5Q99471 154 aa5.81□□□□□ -1.48
HERPUD1-209ENST00000564678 SLC25A33Q9BSK2 321 aa5.81□□□□□ -1.48
HERPUD1-209ENST00000564678 DNAJC4Q9NNZ3 241 aa5.81□□□□□ -1.48
HERPUD1-209ENST00000564678 SIGLEC9Q9Y336 463 aa5.81□□□□□ -1.48
HERPUD1-209ENST00000564678 SMG1Q96Q15 3661 aaKnown RBP5.81□□□□□ -1.48
HERPUD1-209ENST00000564678 A0A1W2PPI3 338 aa5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 A0A1W2PRE2 83 aa5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 TCRBV4S1A1TA0A5B7 111 aa5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 PSMB11A5LHX3 300 aa5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 C9JCJ5 164 aa5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 SAP30O75446 220 aa5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 CRYGCP07315 174 aa5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 CDKN1BP46527 198 aa5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 RPL27AP46776 148 aaKnown RBP5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 MEOX2P50222 304 aa5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 LCN2P80188 198 aa5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 PSG5Q15238 335 aa5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 MLANAQ16655 118 aa5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 KCNIP4Q6PIL6 250 aa5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 MOB3BQ86TA1 216 aa5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 PPP1R27Q86WC6 154 aa5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 IGLC7A0M8Q6 106 aa5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 NDUFS8O00217 210 aa5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 GGCTO75223 188 aaKnown RBP5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 FOXH1O75593 365 aa5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 TRGC2P03986 189 aa5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 HTR1DP28221 377 aa5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 CEACAM3P40198 252 aa5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 CDX1P47902 265 aaPredicted RBP5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 FOXL1Q12952 345 aa5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 SPATA31B1PQ5VZV4 182 aa5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 MIR17HGQ75NE6 70 aa5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 OR1P1Q8NH06 330 aa5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 OR2T6Q8NHC8 308 aa5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 TMEM37Q8WXS4 190 aa5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 RITA1Q96K30 269 aa5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 C12orf57Q99622 126 aa5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 FNDC4Q9H6D8 234 aaPredicted RBP5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 DPM3Q9P2X0 92 aa5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 YTHDF2Q9Y5A9 579 aaKnown RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms