RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 GDF5OSQ5U4N7 250 aa5.13□□□□□ -1.59
VPS4A-203ENST00000564399 OR4X1Q8NH49 305 aa5.13□□□□□ -1.59
VPS4A-203ENST00000564399 Q8WTZ3 238 aa5.13□□□□□ -1.59
VPS4A-203ENST00000564399 SEC22AQ96IW7 307 aa5.13□□□□□ -1.59
VPS4A-203ENST00000564399 SLC35B3Q9H1N7 401 aa5.13□□□□□ -1.59
VPS4A-203ENST00000564399 DUSP21Q9H596 190 aa5.13□□□□□ -1.59
VPS4A-203ENST00000564399 Q9H8V8 135 aa5.13□□□□□ -1.59
VPS4A-203ENST00000564399 IFT46Q9NQC8 304 aa5.13□□□□□ -1.59
VPS4A-203ENST00000564399 U3KQE9 123 aa5.13□□□□□ -1.59
VPS4A-203ENST00000564399 M0QYG6 137 aa5.12□□□□□ -1.59
VPS4A-203ENST00000564399 IGKV1-17P01599 117 aa5.12□□□□□ -1.59
VPS4A-203ENST00000564399 BTF3P20290 206 aaKnown RBP5.12□□□□□ -1.59
VPS4A-203ENST00000564399 ALDH3B2P48448 385 aa5.12□□□□□ -1.59
VPS4A-203ENST00000564399 PSG9Q00887 426 aa5.12□□□□□ -1.59
VPS4A-203ENST00000564399 IZUMO4Q1ZYL8 232 aa5.12□□□□□ -1.59
VPS4A-203ENST00000564399 DHRS11Q6UWP2 260 aa5.12□□□□□ -1.59
VPS4A-203ENST00000564399 SIGLEC15Q6ZMC9 328 aa5.12□□□□□ -1.59
VPS4A-203ENST00000564399 FOXI2Q6ZQN5 318 aa5.12□□□□□ -1.59
VPS4A-203ENST00000564399 SSX7Q7RTT5 188 aa5.12□□□□□ -1.59
VPS4A-203ENST00000564399 PRSS48Q7RTY5 328 aa5.12□□□□□ -1.59
VPS4A-203ENST00000564399 C1orf158Q8N1D5 194 aa5.12□□□□□ -1.59
VPS4A-203ENST00000564399 OR6F1Q8NGZ6 308 aa5.12□□□□□ -1.59
VPS4A-203ENST00000564399 MRGPRFQ96AM1 343 aa5.12□□□□□ -1.59
VPS4A-203ENST00000564399 PDCD10Q9BUL8 212 aa5.12□□□□□ -1.59
VPS4A-203ENST00000564399 VCXQ9H320 206 aa5.12□□□□□ -1.59
VPS4A-203ENST00000564399 SAV1Q9H4B6 383 aaPredicted RBP5.12□□□□□ -1.59
VPS4A-203ENST00000564399 FNDC4Q9H6D8 234 aaPredicted RBP5.12□□□□□ -1.59
VPS4A-203ENST00000564399 AUNIPQ9H7T9 357 aa5.12□□□□□ -1.59
VPS4A-203ENST00000564399 ENY2Q9NPA8 101 aa5.12□□□□□ -1.59
VPS4A-203ENST00000564399 DIABLOQ9NR28 239 aa5.12□□□□□ -1.59
VPS4A-203ENST00000564399 NDUFB11Q9NX14 153 aa5.12□□□□□ -1.59
VPS4A-203ENST00000564399 RRP15Q9Y3B9 282 aaKnown RBP5.12□□□□□ -1.59
VPS4A-203ENST00000564399 LYRM9A8MSI8 78 aa5.11□□□□□ -1.59
VPS4A-203ENST00000564399 GSTZ1O43708 216 aaPredicted RBP5.11□□□□□ -1.59
VPS4A-203ENST00000564399 IGKV1-39P01597 117 aa5.11□□□□□ -1.59
VPS4A-203ENST00000564399 PMP2P02689 132 aa5.11□□□□□ -1.59
VPS4A-203ENST00000564399 IGKV1D-39P04432 117 aa5.11□□□□□ -1.59
VPS4A-203ENST00000564399 IL4P05112 153 aa5.11□□□□□ -1.59
VPS4A-203ENST00000564399 ATP5G1P05496 136 aa5.11□□□□□ -1.59
VPS4A-203ENST00000564399 RNASE2P10153 161 aaKnown RBP5.11□□□□□ -1.59
VPS4A-203ENST00000564399 ID1P41134 155 aa5.11□□□□□ -1.59
VPS4A-203ENST00000564399 ETV6P41212 452 aa5.11□□□□□ -1.59
VPS4A-203ENST00000564399 ATP5G3P48201 142 aa5.11□□□□□ -1.59
VPS4A-203ENST00000564399 RORCP51449 518 aa5.11□□□□□ -1.59
VPS4A-203ENST00000564399 XGP55808 180 aa5.11□□□□□ -1.59
VPS4A-203ENST00000564399 DHODHQ02127 395 aa5.11□□□□□ -1.59
VPS4A-203ENST00000564399 USF2Q15853 346 aaPredicted RBP5.11□□□□□ -1.59
VPS4A-203ENST00000564399 EBLN2Q6P2I7 272 aa5.11□□□□□ -1.59
VPS4A-203ENST00000564399 SFXN4Q6P4A7 337 aa5.11□□□□□ -1.59
VPS4A-203ENST00000564399 TBC1D26Q86UD7 250 aa5.11□□□□□ -1.59
VPS4A-203ENST00000564399 ZNF709Q8N972 641 aa5.11□□□□□ -1.59
VPS4A-203ENST00000564399 OR1S2Q8NGQ3 325 aa5.11□□□□□ -1.59
VPS4A-203ENST00000564399 OR5H6Q8NGV6 325 aa5.11□□□□□ -1.59
VPS4A-203ENST00000564399 OR5H2Q8NGV7 314 aa5.11□□□□□ -1.59
VPS4A-203ENST00000564399 COQ8AQ8NI60 647 aa5.11□□□□□ -1.59
VPS4A-203ENST00000564399 KRTAP1-5Q9BYS1 174 aa5.11□□□□□ -1.59
VPS4A-203ENST00000564399 FXYD6Q9H0Q3 95 aa5.11□□□□□ -1.59
VPS4A-203ENST00000564399 SCPEP1Q9HB40 452 aa5.11□□□□□ -1.59
VPS4A-203ENST00000564399 FAM212BQ9NTI7 297 aaPredicted RBP5.11□□□□□ -1.59
VPS4A-203ENST00000564399 MDFICQ9P1T7 246 aa5.11□□□□□ -1.59
VPS4A-203ENST00000564399 A0A0A6YYH2 397 aa5.1□□□□□ -1.59
VPS4A-203ENST00000564399 A6NJ64 397 aa5.1□□□□□ -1.59
VPS4A-203ENST00000564399 ZNF705GA8MUZ8 300 aaPredicted RBP5.1□□□□□ -1.59
VPS4A-203ENST00000564399 EREGO14944 169 aa5.1□□□□□ -1.59
VPS4A-203ENST00000564399 BUB3O43684 328 aa5.1□□□□□ -1.59
VPS4A-203ENST00000564399 SMR3BP02814 79 aaPredicted RBP5.1□□□□□ -1.59
VPS4A-203ENST00000564399 IGLC1P0CG04 106 aa5.1□□□□□ -1.59
VPS4A-203ENST00000564399 OR10J1P30954 320 aa5.1□□□□□ -1.59
VPS4A-203ENST00000564399 FUSP35637 526 aaKnown RBP eCLIP5.1□□□□□ -1.59
VPS4A-203ENST00000564399 RPL5P46777 297 aaKnown RBP5.1□□□□□ -1.59
VPS4A-203ENST00000564399 RND2P52198 227 aa5.1□□□□□ -1.59
VPS4A-203ENST00000564399 AKR1C2P52895 323 aa5.1□□□□□ -1.59
VPS4A-203ENST00000564399 TAS2R20P59543 309 aa5.1□□□□□ -1.59
VPS4A-203ENST00000564399 YPEL3P61236 119 aaPredicted RBP5.1□□□□□ -1.59
VPS4A-203ENST00000564399 TBCEQ15813 527 aaPredicted RBP5.1□□□□□ -1.59
VPS4A-203ENST00000564399 FAM78BQ5VT40 261 aa5.1□□□□□ -1.59
VPS4A-203ENST00000564399 SPATA31B1PQ5VZV4 182 aa5.1□□□□□ -1.59
VPS4A-203ENST00000564399 LPCAT3Q6P1A2 487 aa5.1□□□□□ -1.59
VPS4A-203ENST00000564399 LINC00528Q8N1L1 170 aa5.1□□□□□ -1.59
VPS4A-203ENST00000564399 OR4C16Q8NGL9 310 aa5.1□□□□□ -1.59
VPS4A-203ENST00000564399 RNF141Q8WVD5 230 aa5.1□□□□□ -1.59
VPS4A-203ENST00000564399 SLC25A38Q96DW6 304 aa5.1□□□□□ -1.59
VPS4A-203ENST00000564399 CLUHP3Q96NS8 147 aa5.1□□□□□ -1.59
VPS4A-203ENST00000564399 UHRF2Q96PU4 802 aa5.1□□□□□ -1.59
VPS4A-203ENST00000564399 Q9H3A6 140 aa5.1□□□□□ -1.59
VPS4A-203ENST00000564399 TXNL4BQ9NX01 149 aaKnown RBP5.1□□□□□ -1.59
VPS4A-203ENST00000564399 ZNF586Q9NXT0 402 aa5.1□□□□□ -1.59
VPS4A-203ENST00000564399 KLK11Q9UBX7 282 aa5.1□□□□□ -1.59
VPS4A-203ENST00000564399 MYCBP2O75592 4640 aa5.1□□□□□ -1.59
VPS4A-203ENST00000564399 F6UB75 175 aa5.09□□□□□ -1.59
VPS4A-203ENST00000564399 INS-IGF2F8WCM5 200 aa5.09□□□□□ -1.59
VPS4A-203ENST00000564399 FAM229AH3BQW9 127 aa5.09□□□□□ -1.59
VPS4A-203ENST00000564399 IFNA5P01569 189 aa5.09□□□□□ -1.59
VPS4A-203ENST00000564399 PRM2P04554 102 aa5.09□□□□□ -1.59
VPS4A-203ENST00000564399 RD3LP0DJH9 198 aa5.09□□□□□ -1.59
VPS4A-203ENST00000564399 PSMB3P49720 205 aa5.09□□□□□ -1.59
VPS4A-203ENST00000564399 TAS2R46P59540 309 aa5.09□□□□□ -1.59
VPS4A-203ENST00000564399 TSPAN5P62079 268 aa5.09□□□□□ -1.59
VPS4A-203ENST00000564399 MXD1Q05195 221 aa5.09□□□□□ -1.59
VPS4A-203ENST00000564399 FCN2Q15485 313 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms