RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 KIR2DS2P43631 304 aa14.31□□□□□ -0.12
GDE1-203ENST00000564172 ZNF137PP52743 207 aa14.31□□□□□ -0.12
GDE1-203ENST00000564172 TAX1BP3O14907 124 aa14.3□□□□□ -0.12
GDE1-203ENST00000564172 IGLV1-47P01700 117 aa14.3□□□□□ -0.12
GDE1-203ENST00000564172 CD33P20138 364 aa14.3□□□□□ -0.12
GDE1-203ENST00000564172 ADIRFQ15847 76 aa14.3□□□□□ -0.12
GDE1-203ENST00000564172 NECAP1Q8NC96 275 aa14.3□□□□□ -0.12
GDE1-203ENST00000564172 CLEC7AQ9BXN2 247 aa14.3□□□□□ -0.12
GDE1-203ENST00000564172 PTPN13Q12923 2485 aa14.3□□□□□ -0.12
GDE1-203ENST00000564172 VWC2LB2RUY7 222 aa14.3□□□□□ -0.12
GDE1-203ENST00000564172 KRTAP10-9P60411 292 aa14.3□□□□□ -0.12
GDE1-203ENST00000564172 YPEL3P61236 119 aaPredicted RBP14.3□□□□□ -0.12
GDE1-203ENST00000564172 DIAPH2-AS1Q14236 149 aa14.3□□□□□ -0.12
GDE1-203ENST00000564172 FBN2P35556 2912 aa14.3□□□□□ -0.12
GDE1-203ENST00000564172 DOPEY2Q9Y3R5 2298 aa14.29□□□□□ -0.12
GDE1-203ENST00000564172 ENSAO43768 121 aaKnown RBP14.29□□□□□ -0.12
GDE1-203ENST00000564172 MT-CO2P00403 227 aa14.29□□□□□ -0.12
GDE1-203ENST00000564172 REG1AP05451 166 aa14.29□□□□□ -0.12
GDE1-203ENST00000564172 EWSR1Q01844 656 aaKnown RBP eCLIP14.29□□□□□ -0.12
GDE1-203ENST00000564172 MTURNQ8N3F0 131 aa14.29□□□□□ -0.12
GDE1-203ENST00000564172 SSBP4Q9BWG4 385 aaPredicted RBP14.29□□□□□ -0.12
GDE1-203ENST00000564172 GNG13Q9P2W3 67 aa14.29□□□□□ -0.12
GDE1-203ENST00000564172 OR51B2Q9Y5P1 312 aa14.29□□□□□ -0.12
GDE1-203ENST00000564172 ASH1LQ9NR48 2969 aaKnown RBP14.29□□□□□ -0.12
GDE1-203ENST00000564172 KBTBD11O94819 623 aa14.29□□□□□ -0.12
GDE1-203ENST00000564172 NXPH3O95157 252 aa14.29□□□□□ -0.12
GDE1-203ENST00000564172 OR10J4P0C629 311 aa14.29□□□□□ -0.12
GDE1-203ENST00000564172 COX7A1P24310 79 aa14.29□□□□□ -0.12
GDE1-203ENST00000564172 REG1BP48304 166 aa14.29□□□□□ -0.12
GDE1-203ENST00000564172 RPL23P62829 140 aaKnown RBP14.29□□□□□ -0.12
GDE1-203ENST00000564172 HLA-DRB5Q30154 266 aa14.29□□□□□ -0.12
GDE1-203ENST00000564172 PSMG3-AS1Q96PY0 264 aa14.29□□□□□ -0.12
GDE1-203ENST00000564172 MRPL20Q9BYC9 149 aaKnown RBP14.29□□□□□ -0.12
GDE1-203ENST00000564172 PARLQ9H300 379 aa14.29□□□□□ -0.12
GDE1-203ENST00000564172 LOC102724200A0A096LPH7 203 aaPredicted RBP14.28□□□□□ -0.12
GDE1-203ENST00000564172 SAP30O75446 220 aa14.28□□□□□ -0.12
GDE1-203ENST00000564172 SMIM17P0DL12 118 aa14.28□□□□□ -0.12
GDE1-203ENST00000564172 PRTN3P24158 256 aa14.28□□□□□ -0.12
GDE1-203ENST00000564172 H2BFWTQ7Z2G1 175 aa14.28□□□□□ -0.12
GDE1-203ENST00000564172 TENM4Q6N022 2769 aa14.28□□□□□ -0.12
GDE1-203ENST00000564172 IGHV4-30-2A0A087WSY4 118 aa14.27□□□□□ -0.12
GDE1-203ENST00000564172 IGHV4-61A0A0C4DH41 118 aa14.27□□□□□ -0.12
GDE1-203ENST00000564172 GNG7O60262 68 aa14.27□□□□□ -0.12
GDE1-203ENST00000564172 OR4F17Q8NGA8 305 aa14.27□□□□□ -0.12
GDE1-203ENST00000564172 MBD3L1Q8WWY6 194 aa14.27□□□□□ -0.12
GDE1-203ENST00000564172 UHRF2Q96PU4 802 aa14.27□□□□□ -0.12
GDE1-203ENST00000564172 OR4F4Q96R69 305 aa14.27□□□□□ -0.12
GDE1-203ENST00000564172 SMIM7Q9BQ49 75 aa14.27□□□□□ -0.12
GDE1-203ENST00000564172 TRAV26-1A0A087WT03 109 aa14.27□□□□□ -0.13
GDE1-203ENST00000564172 IFNA1P01562 189 aa14.27□□□□□ -0.13
GDE1-203ENST00000564172 IGLC1P0CG04 106 aa14.27□□□□□ -0.13
GDE1-203ENST00000564172 IL3RAP26951 378 aa14.27□□□□□ -0.13
GDE1-203ENST00000564172 Q0VG73 95 aa14.27□□□□□ -0.13
GDE1-203ENST00000564172 AMMECR1LQ6DCA0 310 aa14.27□□□□□ -0.13
GDE1-203ENST00000564172 DEFB125Q8N687 156 aa14.27□□□□□ -0.13
GDE1-203ENST00000564172 KIR3DL3Q8N743 410 aa14.27□□□□□ -0.13
GDE1-203ENST00000564172 OR5AN1Q8NGI8 311 aa14.27□□□□□ -0.13
GDE1-203ENST00000564172 NABP2Q9BQ15 211 aa14.27□□□□□ -0.13
GDE1-203ENST00000564172 RSG1Q9BU20 258 aa14.27□□□□□ -0.13
GDE1-203ENST00000564172 C11orf1Q9H5F2 150 aa14.27□□□□□ -0.13
GDE1-203ENST00000564172 TP53TG3Q9ULZ0 132 aa14.27□□□□□ -0.13
GDE1-203ENST00000564172 HELZ2Q9BYK8 2649 aaKnown RBP14.27□□□□□ -0.13
GDE1-203ENST00000564172 BUB1B-PAK6H3BSN5 160 aa14.26□□□□□ -0.13
GDE1-203ENST00000564172 FOXH1O75593 365 aa14.26□□□□□ -0.13
GDE1-203ENST00000564172 RAB9AP51151 201 aa14.26□□□□□ -0.13
GDE1-203ENST00000564172 LINC00310P59036 64 aa14.26□□□□□ -0.13
GDE1-203ENST00000564172 RTL8BQ17RB0 113 aa14.26□□□□□ -0.13
GDE1-203ENST00000564172 VKORC1L1Q8N0U8 176 aa14.26□□□□□ -0.13
GDE1-203ENST00000564172 OR4P4Q8NGL7 312 aa14.26□□□□□ -0.13
GDE1-203ENST00000564172 CELSR2Q9HCU4 2923 aa14.26□□□□□ -0.13
GDE1-203ENST00000564172 CENPEQ02224 2701 aa14.26□□□□□ -0.13
GDE1-203ENST00000564172 H0YJW9 148 aa14.26□□□□□ -0.13
GDE1-203ENST00000564172 IGKV1-16P04430 117 aa14.26□□□□□ -0.13
GDE1-203ENST00000564172 BAXQ07812 192 aa14.26□□□□□ -0.13
GDE1-203ENST00000564172 FOXL1Q12952 345 aa14.26□□□□□ -0.13
GDE1-203ENST00000564172 SIGLECL1Q8N7X8 197 aa14.26□□□□□ -0.13
GDE1-203ENST00000564172 OR11H6Q8NGC7 330 aa14.26□□□□□ -0.13
GDE1-203ENST00000564172 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.26□□□□□ -0.13
GDE1-203ENST00000564172 FBXL7Q9UJT9 491 aa14.26□□□□□ -0.13
GDE1-203ENST00000564172 WNK2Q9Y3S1 2297 aa14.25□□□□□ -0.13
GDE1-203ENST00000564172 CHST1O43916 411 aa14.25□□□□□ -0.13
GDE1-203ENST00000564172 SSSCA1O60232 199 aa14.25□□□□□ -0.13
GDE1-203ENST00000564172 ZNF253O75346 499 aa14.25□□□□□ -0.13
GDE1-203ENST00000564172 VENTXO95231 258 aa14.25□□□□□ -0.13
GDE1-203ENST00000564172 DSCR9P59020 149 aa14.25□□□□□ -0.13
GDE1-203ENST00000564172 OR2C3Q8N628 320 aa14.25□□□□□ -0.13
GDE1-203ENST00000564172 OR1N2Q8NGR9 330 aa14.25□□□□□ -0.13
GDE1-203ENST00000564172 SIGMAR1Q99720 223 aa14.25□□□□□ -0.13
GDE1-203ENST00000564172 PGPEP1Q9NXJ5 209 aa14.25□□□□□ -0.13
GDE1-203ENST00000564172 CSMD2Q7Z408 3487 aa14.25□□□□□ -0.13
GDE1-203ENST00000564172 A0A1B0GUS0 222 aa14.25□□□□□ -0.13
GDE1-203ENST00000564172 TMEM250H0YL14 139 aa14.25□□□□□ -0.13
GDE1-203ENST00000564172 APOA2P02652 100 aa14.25□□□□□ -0.13
GDE1-203ENST00000564172 ERVK-16P61578 105 aa14.25□□□□□ -0.13
GDE1-203ENST00000564172 PMCHL1Q16048 86 aa14.25□□□□□ -0.13
GDE1-203ENST00000564172 HCP5Q6MZN7 132 aa14.25□□□□□ -0.13
GDE1-203ENST00000564172 TMEM50AO95807 157 aa14.24□□□□□ -0.13
GDE1-203ENST00000564172 GPX1P07203 203 aa14.24□□□□□ -0.13
GDE1-203ENST00000564172 OR9G9P0C7N8 305 aa14.24□□□□□ -0.13
GDE1-203ENST00000564172 CEACAM3P40198 252 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms