RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 LHFPL4Q7Z7J7 247 aa8.58□□□□□ -1.04
RNF40-204ENST00000563683 MUC15Q8N387 334 aa8.58□□□□□ -1.04
RNF40-204ENST00000563683 AAMDCQ9H7C9 122 aa8.58□□□□□ -1.04
RNF40-204ENST00000563683 LINC00312Q9Y6C7 94 aa8.58□□□□□ -1.04
RNF40-204ENST00000563683 UPK2O00526 184 aa8.57□□□□□ -1.04
RNF40-204ENST00000563683 TSPOP30536 169 aa8.57□□□□□ -1.04
RNF40-204ENST00000563683 FBLN7Q53RD9 439 aa8.57□□□□□ -1.04
RNF40-204ENST00000563683 SPRY4Q9C004 299 aa8.57□□□□□ -1.04
RNF40-204ENST00000563683 S4R3C0 116 aa8.57□□□□□ -1.04
RNF40-204ENST00000563683 VCANP13611 3396 aa8.57□□□□□ -1.04
RNF40-204ENST00000563683 TMSB15BA0A087X1C1 80 aa8.57□□□□□ -1.04
RNF40-204ENST00000563683 TM4SF5O14894 197 aa8.57□□□□□ -1.04
RNF40-204ENST00000563683 APCSP02743 223 aa8.57□□□□□ -1.04
RNF40-204ENST00000563683 IGKV1-16P04430 117 aa8.57□□□□□ -1.04
RNF40-204ENST00000563683 PLA2G5P39877 138 aa8.57□□□□□ -1.04
RNF40-204ENST00000563683 RELBQ01201 579 aa8.57□□□□□ -1.04
RNF40-204ENST00000563683 Q8N976 141 aa8.57□□□□□ -1.04
RNF40-204ENST00000563683 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.57□□□□□ -1.04
RNF40-204ENST00000563683 TMUB1Q9BVT8 246 aa8.57□□□□□ -1.04
RNF40-204ENST00000563683 RNASE7Q9H1E1 156 aaKnown RBP8.57□□□□□ -1.04
RNF40-204ENST00000563683 FAM208BQ5VWN6 2430 aa8.57□□□□□ -1.04
RNF40-204ENST00000563683 A0A1W2PS18 150 aa8.57□□□□□ -1.04
RNF40-204ENST00000563683 F2Z2F3 143 aa8.57□□□□□ -1.04
RNF40-204ENST00000563683 HLA-DQA1P01909 254 aa8.57□□□□□ -1.04
RNF40-204ENST00000563683 STXBP6Q8NFX7 210 aa8.57□□□□□ -1.04
RNF40-204ENST00000563683 MGST2Q99735 147 aa8.57□□□□□ -1.04
RNF40-204ENST00000563683 RPUSD1Q9UJJ7 312 aaKnown RBP8.57□□□□□ -1.04
RNF40-204ENST00000563683 IGHV3-35A0A0C4DH35 117 aa8.56□□□□□ -1.04
RNF40-204ENST00000563683 MBD3L4A6NDZ8 208 aaPredicted RBP8.56□□□□□ -1.04
RNF40-204ENST00000563683 MBD3L3A6NE82 208 aaPredicted RBP8.56□□□□□ -1.04
RNF40-204ENST00000563683 MBD3L5A6NJ08 208 aaPredicted RBP8.56□□□□□ -1.04
RNF40-204ENST00000563683 FOXH1O75593 365 aa8.56□□□□□ -1.04
RNF40-204ENST00000563683 PRB4P10163 310 aaPredicted RBP8.56□□□□□ -1.04
RNF40-204ENST00000563683 LINC00305Q7Z4B0 112 aa8.56□□□□□ -1.04
RNF40-204ENST00000563683 MBD3L2Q8NHZ7 208 aaPredicted RBP8.56□□□□□ -1.04
RNF40-204ENST00000563683 FBXL15Q9H469 300 aa8.56□□□□□ -1.04
RNF40-204ENST00000563683 ZNF785A8K8V0 405 aa8.56□□□□□ -1.04
RNF40-204ENST00000563683 C3orf79P0CE67 100 aa8.56□□□□□ -1.04
RNF40-204ENST00000563683 HIST1H1EP10412 219 aaKnown RBP8.56□□□□□ -1.04
RNF40-204ENST00000563683 HTR1DP28221 377 aa8.56□□□□□ -1.04
RNF40-204ENST00000563683 VAMP3Q15836 100 aa8.56□□□□□ -1.04
RNF40-204ENST00000563683 PRNTQ86SH4 94 aa8.56□□□□□ -1.04
RNF40-204ENST00000563683 ZNF596Q8TC21 504 aa8.56□□□□□ -1.04
RNF40-204ENST00000563683 RALYQ9UKM9 306 aaKnown RBP8.56□□□□□ -1.04
RNF40-204ENST00000563683 IGF2RP11717 2491 aa8.56□□□□□ -1.04
RNF40-204ENST00000563683 M0R2Z0 102 aa8.56□□□□□ -1.04
RNF40-204ENST00000563683 P0C879 139 aa8.56□□□□□ -1.04
RNF40-204ENST00000563683 SRIP30626 198 aa8.56□□□□□ -1.04
RNF40-204ENST00000563683 EAF1Q96JC9 268 aaPredicted RBP8.56□□□□□ -1.04
RNF40-204ENST00000563683 ACACBO00763 2458 aa8.56□□□□□ -1.04
RNF40-204ENST00000563683 TRAV30A0A087WSZ9 112 aa8.55□□□□□ -1.04
RNF40-204ENST00000563683 IGHV2-26A0A0B4J1V2 119 aa8.55□□□□□ -1.04
RNF40-204ENST00000563683 IGHV2-70DA0A0C4DH43 119 aa8.55□□□□□ -1.04
RNF40-204ENST00000563683 CD24P25063 80 aa8.55□□□□□ -1.04
RNF40-204ENST00000563683 ZNF134P52741 427 aa8.55□□□□□ -1.04
RNF40-204ENST00000563683 CX3CL1P78423 397 aa8.55□□□□□ -1.04
RNF40-204ENST00000563683 UNQ5815/PRO19632Q6UWF5 114 aa8.55□□□□□ -1.04
RNF40-204ENST00000563683 HIGD1AQ9Y241 93 aa8.55□□□□□ -1.04
RNF40-204ENST00000563683 PYYP10082 97 aa8.55□□□□□ -1.04
RNF40-204ENST00000563683 UCNP55089 124 aa8.55□□□□□ -1.04
RNF40-204ENST00000563683 C11orf53Q8IXP5 236 aa8.55□□□□□ -1.04
RNF40-204ENST00000563683 VPS25Q9BRG1 176 aa8.55□□□□□ -1.04
RNF40-204ENST00000563683 WNT10AQ9GZT5 417 aa8.55□□□□□ -1.04
RNF40-204ENST00000563683 LAMA1P25391 3075 aa8.55□□□□□ -1.04
RNF40-204ENST00000563683 TRAV5A0A0B4J249 113 aa8.55□□□□□ -1.04
RNF40-204ENST00000563683 TEX50A0A1B0GTY4 177 aa8.55□□□□□ -1.04
RNF40-204ENST00000563683 AMY1AP04745 511 aa8.55□□□□□ -1.04
RNF40-204ENST00000563683 CLEC3BP05452 202 aa8.55□□□□□ -1.04
RNF40-204ENST00000563683 APOBEC3AP31941 199 aaPredicted RBP8.55□□□□□ -1.04
RNF40-204ENST00000563683 ST6GALNAC3Q8NDV1 305 aa8.55□□□□□ -1.04
RNF40-204ENST00000563683 C11orf52Q96A22 123 aa8.55□□□□□ -1.04
RNF40-204ENST00000563683 THYN1Q9P016 225 aa8.55□□□□□ -1.04
RNF40-204ENST00000563683 PPBPP02775 128 aa8.54□□□□□ -1.04
RNF40-204ENST00000563683 Q6ZS92 163 aa8.54□□□□□ -1.04
RNF40-204ENST00000563683 V9GYV3 84 aa8.54□□□□□ -1.04
RNF40-204ENST00000563683 TRAV9-2A0A087WT02 112 aa8.54□□□□□ -1.04
RNF40-204ENST00000563683 K7EN84 100 aa8.54□□□□□ -1.04
RNF40-204ENST00000563683 CEACAM8P31997 349 aaPredicted RBP8.54□□□□□ -1.04
RNF40-204ENST00000563683 ARL3P36405 182 aa8.54□□□□□ -1.04
RNF40-204ENST00000563683 LGALS7P47929 136 aa8.54□□□□□ -1.04
RNF40-204ENST00000563683 TMPRSS3P57727 454 aa8.54□□□□□ -1.04
RNF40-204ENST00000563683 RPS20P60866 119 aaKnown RBP8.54□□□□□ -1.04
RNF40-204ENST00000563683 PRCDQ00LT1 54 aa8.54□□□□□ -1.04
RNF40-204ENST00000563683 RNASE6Q93091 150 aaKnown RBP8.54□□□□□ -1.04
RNF40-204ENST00000563683 CLEC7AQ9BXN2 247 aa8.54□□□□□ -1.04
RNF40-204ENST00000563683 UBTD1Q9HAC8 227 aa8.54□□□□□ -1.04
RNF40-204ENST00000563683 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.54□□□□□ -1.04
RNF40-204ENST00000563683 CA1P00915 261 aaPredicted RBP8.54□□□□□ -1.04
RNF40-204ENST00000563683 S100A7P31151 101 aa8.54□□□□□ -1.04
RNF40-204ENST00000563683 MEF2CQ06413 473 aaPredicted RBP8.54□□□□□ -1.04
RNF40-204ENST00000563683 OR52E5Q8NH55 327 aa8.54□□□□□ -1.04
RNF40-204ENST00000563683 MRPL27Q9P0M9 148 aaKnown RBP8.54□□□□□ -1.04
RNF40-204ENST00000563683 RNF114Q9Y508 228 aa8.54□□□□□ -1.04
RNF40-204ENST00000563683 A0A0G2JNJ9 132 aa8.54□□□□□ -1.04
RNF40-204ENST00000563683 TMEM136Q6ZRR5 245 aa8.54□□□□□ -1.04
RNF40-204ENST00000563683 PRSS3P2Q8NHM4 247 aa8.54□□□□□ -1.04
RNF40-204ENST00000563683 PRO3102Q9H379 93 aa8.54□□□□□ -1.04
RNF40-204ENST00000563683 OSTCQ9NRP0 149 aa8.54□□□□□ -1.04
RNF40-204ENST00000563683 Q9UFV3 132 aa8.54□□□□□ -1.04
RNF40-204ENST00000563683 YTHDF2Q9Y5A9 579 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms