RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 SMPXQ9UHP9 88 aa6.42□□□□□ -1.38
UBR1-204ENST00000563239 IGKV1D-37A0A075B6S9 117 aa6.41□□□□□ -1.38
UBR1-204ENST00000563239 IGHV7-4-1A0A0J9YVY3 117 aa6.41□□□□□ -1.38
UBR1-204ENST00000563239 RPS10-NUDT3A0A1W2PQS6 291 aa6.41□□□□□ -1.38
UBR1-204ENST00000563239 PMS2P5A8MQ11 134 aa6.41□□□□□ -1.38
UBR1-204ENST00000563239 CHEK1O14757 476 aa6.41□□□□□ -1.38
UBR1-204ENST00000563239 MED6O75586 246 aa6.41□□□□□ -1.38
UBR1-204ENST00000563239 SCAF4O95104 1147 aaKnown RBP6.41□□□□□ -1.38
UBR1-204ENST00000563239 MBPP02686 304 aaPredicted RBP6.41□□□□□ -1.38
UBR1-204ENST00000563239 APOHP02749 345 aaPredicted RBP6.41□□□□□ -1.38
UBR1-204ENST00000563239 IFNA4P05014 189 aa6.41□□□□□ -1.38
UBR1-204ENST00000563239 OR10J1P30954 320 aa6.41□□□□□ -1.38
UBR1-204ENST00000563239 GPX4P36969 197 aaPredicted RBP6.41□□□□□ -1.38
UBR1-204ENST00000563239 NKX2-1P43699 371 aaPredicted RBP6.41□□□□□ -1.38
UBR1-204ENST00000563239 IL15RAQ13261 267 aa6.41□□□□□ -1.38
UBR1-204ENST00000563239 GAMTQ14353 236 aa6.41□□□□□ -1.38
UBR1-204ENST00000563239 NOXA1Q86UR1 476 aa6.41□□□□□ -1.38
UBR1-204ENST00000563239 LILRB2Q8N423 598 aa6.41□□□□□ -1.38
UBR1-204ENST00000563239 ENKURQ8TC29 256 aa6.41□□□□□ -1.38
UBR1-204ENST00000563239 DYNLRB2Q8TF09 96 aa6.41□□□□□ -1.38
UBR1-204ENST00000563239 NPIPB3Q92617 1050 aa6.41□□□□□ -1.38
UBR1-204ENST00000563239 CIB3Q96Q77 187 aaPredicted RBP6.41□□□□□ -1.38
UBR1-204ENST00000563239 B9D2Q9BPU9 175 aa6.41□□□□□ -1.38
UBR1-204ENST00000563239 MARVELD1Q9BSK0 173 aa6.41□□□□□ -1.38
UBR1-204ENST00000563239 C11orf1Q9H5F2 150 aa6.41□□□□□ -1.38
UBR1-204ENST00000563239 C19orf73Q9NVV2 129 aa6.41□□□□□ -1.38
UBR1-204ENST00000563239 RCL1Q9Y2P8 373 aaKnown RBP6.41□□□□□ -1.38
UBR1-204ENST00000563239 PUS1Q9Y606 427 aaKnown RBP eCLIP6.41□□□□□ -1.38
UBR1-204ENST00000563239 SMAD5-AS1Q9Y6J3 95 aa6.41□□□□□ -1.38
UBR1-204ENST00000563239 TRAV30A0A087WSZ9 112 aa6.4□□□□□ -1.38
UBR1-204ENST00000563239 IGHV3-49A0A0A0MS15 119 aa6.4□□□□□ -1.38
UBR1-204ENST00000563239 TRAV25A0A0B4J276 109 aa6.4□□□□□ -1.38
UBR1-204ENST00000563239 A8MZ25 164 aa6.4□□□□□ -1.38
UBR1-204ENST00000563239 INMT-MINDY4F8WBC2 141 aa6.4□□□□□ -1.38
UBR1-204ENST00000563239 H3BP45 60 aa6.4□□□□□ -1.38
UBR1-204ENST00000563239 SSSCA1O60232 199 aa6.4□□□□□ -1.38
UBR1-204ENST00000563239 YIF1AO95070 293 aa6.4□□□□□ -1.38
UBR1-204ENST00000563239 CD7P09564 240 aa6.4□□□□□ -1.38
UBR1-204ENST00000563239 IGHV4-30-4P0DP06 118 aa6.4□□□□□ -1.38
UBR1-204ENST00000563239 YPEL3P61236 119 aaPredicted RBP6.4□□□□□ -1.38
UBR1-204ENST00000563239 SPANXN5Q5MJ07 72 aa6.4□□□□□ -1.38
UBR1-204ENST00000563239 FAM90A2PQ658T7 463 aa6.4□□□□□ -1.38
UBR1-204ENST00000563239 ETFRF1Q6IPR1 90 aa6.4□□□□□ -1.38
UBR1-204ENST00000563239 OR1S2Q8NGQ3 325 aa6.4□□□□□ -1.38
UBR1-204ENST00000563239 ACY3Q96HD9 319 aa6.4□□□□□ -1.38
UBR1-204ENST00000563239 SMIM8Q96KF7 97 aa6.4□□□□□ -1.38
UBR1-204ENST00000563239 RNF2Q99496 336 aa6.4□□□□□ -1.38
UBR1-204ENST00000563239 RHPN1-AS1Q9BWJ2 59 aa6.4□□□□□ -1.38
UBR1-204ENST00000563239 VSIRQ9H7M9 311 aa6.4□□□□□ -1.38
UBR1-204ENST00000563239 GSKIPQ9P0R6 139 aa6.4□□□□□ -1.38
UBR1-204ENST00000563239 TENM3Q9P273 2699 aa6.4□□□□□ -1.39
UBR1-204ENST00000563239 IGKV1OR2-108A0A075B7D4 117 aa6.39□□□□□ -1.39
UBR1-204ENST00000563239 IGHV3OR16-13A0A075B7E8 117 aa6.39□□□□□ -1.39
UBR1-204ENST00000563239 TRAV14DV4A0A0A6YYC5 116 aa6.39□□□□□ -1.39
UBR1-204ENST00000563239 IGHV3-74A0A0B4J1X5 117 aa6.39□□□□□ -1.39
UBR1-204ENST00000563239 C7orf66A4D0T2 115 aa6.39□□□□□ -1.39
UBR1-204ENST00000563239 A6NJY4 79 aa6.39□□□□□ -1.39
UBR1-204ENST00000563239 SNRPGP15A8MWD9 76 aa6.39□□□□□ -1.39
UBR1-204ENST00000563239 TSPAN4O14817 238 aa6.39□□□□□ -1.39
UBR1-204ENST00000563239 CCNKO75909 580 aa6.39□□□□□ -1.39
UBR1-204ENST00000563239 TOMM40O96008 361 aa6.39□□□□□ -1.39
UBR1-204ENST00000563239 FRMD6-AS1P0C7T7 363 aa6.39□□□□□ -1.39
UBR1-204ENST00000563239 CRYBB3P26998 211 aa6.39□□□□□ -1.39
UBR1-204ENST00000563239 DEFA1P59665 94 aa6.39□□□□□ -1.39
UBR1-204ENST00000563239 DEFA3P59666 94 aa6.39□□□□□ -1.39
UBR1-204ENST00000563239 RAB11AP62491 216 aa6.39□□□□□ -1.39
UBR1-204ENST00000563239 ZNF90Q03938 601 aa6.39□□□□□ -1.39
UBR1-204ENST00000563239 DCTN2Q13561 401 aaKnown RBP6.39□□□□□ -1.39
UBR1-204ENST00000563239 GUCA2BQ16661 112 aa6.39□□□□□ -1.39
UBR1-204ENST00000563239 TMEM14EPQ6UXP3 125 aa6.39□□□□□ -1.39
UBR1-204ENST00000563239 LINC00322Q6ZN03 302 aaPredicted RBP6.39□□□□□ -1.39
UBR1-204ENST00000563239 THAP8Q8NA92 274 aa6.39□□□□□ -1.39
UBR1-204ENST00000563239 ST8SIA2Q92186 375 aa6.39□□□□□ -1.39
UBR1-204ENST00000563239 C2orf50Q96LR7 162 aa6.39□□□□□ -1.39
UBR1-204ENST00000563239 NEURL2Q9BR09 285 aa6.39□□□□□ -1.39
UBR1-204ENST00000563239 WFDC10AQ9H1F0 79 aa6.39□□□□□ -1.39
UBR1-204ENST00000563239 PSENENQ9NZ42 101 aa6.39□□□□□ -1.39
UBR1-204ENST00000563239 STRAPQ9Y3F4 350 aaKnown RBP6.39□□□□□ -1.39
UBR1-204ENST00000563239 U3KQE9 123 aa6.39□□□□□ -1.39
UBR1-204ENST00000563239 IGHV3-66A0A0C4DH42 116 aa6.38□□□□□ -1.39
UBR1-204ENST00000563239 C5orf51A6NDU8 294 aa6.38□□□□□ -1.39
UBR1-204ENST00000563239 FAM25EA8MYX2 175 aa6.38□□□□□ -1.39
UBR1-204ENST00000563239 K7EPK0 472 aa6.38□□□□□ -1.39
UBR1-204ENST00000563239 PRAF2O60831 178 aa6.38□□□□□ -1.39
UBR1-204ENST00000563239 SCGB1D2O95969 90 aa6.38□□□□□ -1.39
UBR1-204ENST00000563239 PSG1P11464 419 aa6.38□□□□□ -1.39
UBR1-204ENST00000563239 TAS2R30P59541 319 aa6.38□□□□□ -1.39
UBR1-204ENST00000563239 CD81P60033 236 aa6.38□□□□□ -1.39
UBR1-204ENST00000563239 RPP30P78346 268 aaKnown RBP6.38□□□□□ -1.39
UBR1-204ENST00000563239 PRR20EP86478 221 aa6.38□□□□□ -1.39
UBR1-204ENST00000563239 PRR20CP86479 221 aa6.38□□□□□ -1.39
UBR1-204ENST00000563239 PRR20DP86480 221 aa6.38□□□□□ -1.39
UBR1-204ENST00000563239 PRR20BP86481 221 aa6.38□□□□□ -1.39
UBR1-204ENST00000563239 PRR20AP86496 221 aa6.38□□□□□ -1.39
UBR1-204ENST00000563239 ARL16Q0P5N6 197 aa6.38□□□□□ -1.39
UBR1-204ENST00000563239 USF2Q15853 346 aaPredicted RBP6.38□□□□□ -1.39
UBR1-204ENST00000563239 SBSPONQ8IVN8 264 aa6.38□□□□□ -1.39
UBR1-204ENST00000563239 SLC35E1Q96K37 410 aa6.38□□□□□ -1.39
UBR1-204ENST00000563239 RAB40CQ96S21 281 aa6.38□□□□□ -1.39
UBR1-204ENST00000563239 ASCL2Q99929 193 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms