RNA–Protein interactions for RNA: ENST00000562670.5

CLK3-209, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-209ENST00000562670 SLC35B1P78383 322 aa10.86□□□□□ -0.67
CLK3-209ENST00000562670 BLOC1S1P78537 153 aa10.86□□□□□ -0.67
CLK3-209ENST00000562670 C15orf32Q32M92 178 aa10.86□□□□□ -0.67
CLK3-209ENST00000562670 ACOT6Q3I5F7 207 aaPredicted RBP10.86□□□□□ -0.67
CLK3-209ENST00000562670 STPG3Q8N7X2 389 aa10.86□□□□□ -0.67
CLK3-209ENST00000562670 RNF152Q8N8N0 203 aa10.86□□□□□ -0.67
CLK3-209ENST00000562670 ZNF502Q8TBZ5 544 aa10.86□□□□□ -0.67
CLK3-209ENST00000562670 C19orf24Q9BVV8 132 aa10.86□□□□□ -0.67
CLK3-209ENST00000562670 GSX1Q9H4S2 264 aaPredicted RBP10.86□□□□□ -0.67
CLK3-209ENST00000562670 SLC39A9Q9NUM3 307 aa10.86□□□□□ -0.67
CLK3-209ENST00000562670 MED9Q9NWA0 146 aa10.86□□□□□ -0.67
CLK3-209ENST00000562670 A0A0G2JLM5 398 aa10.85□□□□□ -0.67
CLK3-209ENST00000562670 ZNF705EA8MWA4 302 aaPredicted RBP10.85□□□□□ -0.67
CLK3-209ENST00000562670 IGKV1-17P01599 117 aa10.85□□□□□ -0.67
CLK3-209ENST00000562670 FOXE3Q13461 319 aa10.85□□□□□ -0.67
CLK3-209ENST00000562670 NDUFA5Q16718 116 aa10.85□□□□□ -0.67
CLK3-209ENST00000562670 TMEM95Q3KNT9 176 aa10.85□□□□□ -0.67
CLK3-209ENST00000562670 FFAR4Q5NUL3 377 aa10.85□□□□□ -0.67
CLK3-209ENST00000562670 PXDC1Q5TGL8 231 aa10.85□□□□□ -0.67
CLK3-209ENST00000562670 COMMD1Q8N668 190 aa10.85□□□□□ -0.67
CLK3-209ENST00000562670 LYPD6BQ8NI32 183 aa10.85□□□□□ -0.67
CLK3-209ENST00000562670 MYOZ3Q8TDC0 251 aa10.85□□□□□ -0.67
CLK3-209ENST00000562670 EEF1AKMT3Q96AZ1 226 aa10.85□□□□□ -0.67
CLK3-209ENST00000562670 DUX5Q96PT3 197 aa10.85□□□□□ -0.67
CLK3-209ENST00000562670 SERTAD4Q9NUC0 356 aa10.85□□□□□ -0.67
CLK3-209ENST00000562670 LINC00527Q9UJ94 153 aa10.85□□□□□ -0.67
CLK3-209ENST00000562670 SEC14L6B5MCN3 397 aa10.84□□□□□ -0.67
CLK3-209ENST00000562670 YIF1AO95070 293 aa10.84□□□□□ -0.67
CLK3-209ENST00000562670 NDUFA7O95182 113 aa10.84□□□□□ -0.67
CLK3-209ENST00000562670 IGHV3-48P01763 117 aa10.84□□□□□ -0.67
CLK3-209ENST00000562670 TRGV3P03979 118 aa10.84□□□□□ -0.67
CLK3-209ENST00000562670 ELANEP08246 267 aa10.84□□□□□ -0.67
CLK3-209ENST00000562670 LINC00869P0C866 280 aa10.84□□□□□ -0.67
CLK3-209ENST00000562670 PLP1P60201 277 aa10.84□□□□□ -0.67
CLK3-209ENST00000562670 YPEL3P61236 119 aaPredicted RBP10.84□□□□□ -0.67
CLK3-209ENST00000562670 MIC13Q5XKP0 118 aa10.84□□□□□ -0.67
CLK3-209ENST00000562670 Q6ZSV7 163 aa10.84□□□□□ -0.67
CLK3-209ENST00000562670 C16orf95Q9H693 158 aa10.84□□□□□ -0.67
CLK3-209ENST00000562670 RPRMQ9NS64 109 aa10.84□□□□□ -0.67
CLK3-209ENST00000562670 ZNF355PQ9NSJ1 428 aa10.84□□□□□ -0.67
CLK3-209ENST00000562670 RFNGQ9Y644 331 aa10.84□□□□□ -0.67
CLK3-209ENST00000562670 IGHV3-21A0A0B4J1V1 117 aa10.83□□□□□ -0.68
CLK3-209ENST00000562670 TRAV1-1A0A0B4J248 108 aa10.83□□□□□ -0.68
CLK3-209ENST00000562670 PSMB11A5LHX3 300 aa10.83□□□□□ -0.68
CLK3-209ENST00000562670 LINC00862A6NCI5 91 aa10.83□□□□□ -0.68
CLK3-209ENST00000562670 GNG7O60262 68 aa10.83□□□□□ -0.68
CLK3-209ENST00000562670 TOMM40O96008 361 aa10.83□□□□□ -0.68
CLK3-209ENST00000562670 ELLP55199 621 aaPredicted RBP10.83□□□□□ -0.68
CLK3-209ENST00000562670 TPPP2P59282 170 aa10.83□□□□□ -0.68
CLK3-209ENST00000562670 ATP5G2Q06055 141 aa10.83□□□□□ -0.68
CLK3-209ENST00000562670 TEX38Q6PEX7 206 aa10.83□□□□□ -0.68
CLK3-209ENST00000562670 SPSB3Q6PJ21 355 aa10.83□□□□□ -0.68
CLK3-209ENST00000562670 Q6ZRG5 221 aa10.83□□□□□ -0.68
CLK3-209ENST00000562670 BPIFCQ8NFQ6 507 aa10.83□□□□□ -0.68
CLK3-209ENST00000562670 FAM213BQ8TBF2 198 aa10.83□□□□□ -0.68
CLK3-209ENST00000562670 RCC1LQ96I51 464 aaKnown RBP10.83□□□□□ -0.68
CLK3-209ENST00000562670 CCDC140Q96MF4 163 aa10.83□□□□□ -0.68
CLK3-209ENST00000562670 CTXND1A0A1B0GTU2 59 aa10.82□□□□□ -0.68
CLK3-209ENST00000562670 CYSRT1A8MQ03 144 aa10.82□□□□□ -0.68
CLK3-209ENST00000562670 NUDT19A8MXV4 375 aa10.82□□□□□ -0.68
CLK3-209ENST00000562670 TCF21O43680 179 aa10.82□□□□□ -0.68
CLK3-209ENST00000562670 OR2C1O95371 312 aa10.82□□□□□ -0.68
CLK3-209ENST00000562670 CRYBA1P05813 215 aa10.82□□□□□ -0.68
CLK3-209ENST00000562670 RAB9AP51151 201 aa10.82□□□□□ -0.68
CLK3-209ENST00000562670 RAB2AP61019 212 aa10.82□□□□□ -0.68
CLK3-209ENST00000562670 ZNF90Q03938 601 aa10.82□□□□□ -0.68
CLK3-209ENST00000562670 Q56UQ5 140 aa10.82□□□□□ -0.68
CLK3-209ENST00000562670 RPP25LQ8N5L8 163 aaKnown RBP10.82□□□□□ -0.68
CLK3-209ENST00000562670 OR10G4Q8NGN3 311 aa10.82□□□□□ -0.68
CLK3-209ENST00000562670 OR10G9Q8NGN4 311 aa10.82□□□□□ -0.68
CLK3-209ENST00000562670 OR10G7Q8NGN6 311 aa10.82□□□□□ -0.68
CLK3-209ENST00000562670 OR1L4Q8NGR5 311 aa10.82□□□□□ -0.68
CLK3-209ENST00000562670 WIPF2Q8TF74 440 aaPredicted RBP10.82□□□□□ -0.68
CLK3-209ENST00000562670 GATAD1Q8WUU5 269 aa10.82□□□□□ -0.68
CLK3-209ENST00000562670 MBD3L1Q8WWY6 194 aa10.82□□□□□ -0.68
CLK3-209ENST00000562670 PFDN5Q99471 154 aa10.82□□□□□ -0.68
CLK3-209ENST00000562670 RNF2Q99496 336 aa10.82□□□□□ -0.68
CLK3-209ENST00000562670 VSIRQ9H7M9 311 aa10.82□□□□□ -0.68
CLK3-209ENST00000562670 F8P00451 2351 aa10.82□□□□□ -0.68
CLK3-209ENST00000562670 FN1P02751 2386 aaKnown RBP10.81□□□□□ -0.68
CLK3-209ENST00000562670 ELOA3CA0A087WX78 387 aaPredicted RBP10.81□□□□□ -0.68
CLK3-209ENST00000562670 NUPL2O15504 423 aaKnown RBP10.81□□□□□ -0.68
CLK3-209ENST00000562670 HBE1P02100 147 aa10.81□□□□□ -0.68
CLK3-209ENST00000562670 CTSGP08311 255 aa10.81□□□□□ -0.68
CLK3-209ENST00000562670 OR5G3P0C626 314 aa10.81□□□□□ -0.68
CLK3-209ENST00000562670 PF4V1P10720 104 aa10.81□□□□□ -0.68
CLK3-209ENST00000562670 FHITP49789 147 aa10.81□□□□□ -0.68
CLK3-209ENST00000562670 ZNF616Q08AN1 781 aa10.81□□□□□ -0.68
CLK3-209ENST00000562670 ZNF343Q6P1L6 599 aa10.81□□□□□ -0.68
CLK3-209ENST00000562670 Q71RC1 249 aaPredicted RBP10.81□□□□□ -0.68
CLK3-209ENST00000562670 MS4A10Q96PG2 267 aa10.81□□□□□ -0.68
CLK3-209ENST00000562670 MRPL32Q9BYC8 188 aaKnown RBP10.81□□□□□ -0.68
CLK3-209ENST00000562670 ACTR3CQ9C0K3 210 aaPredicted RBP10.81□□□□□ -0.68
CLK3-209ENST00000562670 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.8□□□□□ -0.68
CLK3-209ENST00000562670 TEX46H3BTG2 121 aa10.8□□□□□ -0.68
CLK3-209ENST00000562670 TGOLN2O43493 480 aa10.8□□□□□ -0.68
CLK3-209ENST00000562670 H2AFB1P0C5Y9 115 aa10.8□□□□□ -0.68
CLK3-209ENST00000562670 RD3LP0DJH9 198 aa10.8□□□□□ -0.68
CLK3-209ENST00000562670 PSG1P11464 419 aa10.8□□□□□ -0.68
CLK3-209ENST00000562670 CDC34P49427 236 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms