RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 TMEM100Q9NV29 134 aa4.4□□□□□ -1.71
CAPN3-211ENST00000562199 PYGO1Q9Y3Y4 419 aa4.4□□□□□ -1.71
CAPN3-211ENST00000562199 MDC1Q14676 2089 aaKnown RBP4.4□□□□□ -1.71
CAPN3-211ENST00000562199 NINQ8N4C6 2090 aa4.4□□□□□ -1.71
CAPN3-211ENST00000562199 SCN5AQ14524 2016 aa4.39□□□□□ -1.71
CAPN3-211ENST00000562199 TRBV6-7A0A0A0MS04 114 aa4.39□□□□□ -1.71
CAPN3-211ENST00000562199 TRAV8-6A0A0B4J262 113 aa4.39□□□□□ -1.71
CAPN3-211ENST00000562199 TRAV4A0A0B4J268 109 aa4.39□□□□□ -1.71
CAPN3-211ENST00000562199 FAM236AA0A1B0GUQ0 79 aa4.39□□□□□ -1.71
CAPN3-211ENST00000562199 FAM236BA0A1B0GV22 79 aa4.39□□□□□ -1.71
CAPN3-211ENST00000562199 A0A1B0GVT2 93 aa4.39□□□□□ -1.71
CAPN3-211ENST00000562199 KNCNA6PVL3 124 aa4.39□□□□□ -1.71
CAPN3-211ENST00000562199 C8orf87E5RJ46 101 aa4.39□□□□□ -1.71
CAPN3-211ENST00000562199 CDX4O14627 284 aaPredicted RBP4.39□□□□□ -1.71
CAPN3-211ENST00000562199 CCL16O15467 120 aa4.39□□□□□ -1.71
CAPN3-211ENST00000562199 HYPMO75409 117 aa4.39□□□□□ -1.71
CAPN3-211ENST00000562199 TPT1P13693 172 aaKnown RBP4.39□□□□□ -1.71
CAPN3-211ENST00000562199 CCL1P22362 96 aa4.39□□□□□ -1.71
CAPN3-211ENST00000562199 FKBP2P26885 142 aaKnown RBP4.39□□□□□ -1.71
CAPN3-211ENST00000562199 PSMB8P28062 276 aa4.39□□□□□ -1.71
CAPN3-211ENST00000562199 PTGDSP41222 190 aa4.39□□□□□ -1.71
CAPN3-211ENST00000562199 PPICP45877 212 aa4.39□□□□□ -1.71
CAPN3-211ENST00000562199 PLGLB1Q02325 96 aa4.39□□□□□ -1.71
CAPN3-211ENST00000562199 FHL2Q14192 279 aa4.39□□□□□ -1.71
CAPN3-211ENST00000562199 OR7A5Q15622 319 aa4.39□□□□□ -1.71
CAPN3-211ENST00000562199 FAM120AOSQ5T036 256 aa4.39□□□□□ -1.71
CAPN3-211ENST00000562199 IGFL4Q6B9Z1 124 aa4.39□□□□□ -1.71
CAPN3-211ENST00000562199 AMTNQ6UX39 209 aa4.39□□□□□ -1.71
CAPN3-211ENST00000562199 SLC25A42Q86VD7 318 aa4.39□□□□□ -1.71
CAPN3-211ENST00000562199 ATOH7Q8N100 152 aa4.39□□□□□ -1.71
CAPN3-211ENST00000562199 OR2T6Q8NHC8 308 aa4.39□□□□□ -1.71
CAPN3-211ENST00000562199 NEUROG1Q92886 237 aa4.39□□□□□ -1.71
CAPN3-211ENST00000562199 MUCL1Q96DR8 90 aa4.39□□□□□ -1.71
CAPN3-211ENST00000562199 DNAJA3Q96EY1 480 aa4.39□□□□□ -1.71
CAPN3-211ENST00000562199 SLC25A44Q96H78 314 aaPredicted RBP4.39□□□□□ -1.71
CAPN3-211ENST00000562199 Q96M85 177 aa4.39□□□□□ -1.71
CAPN3-211ENST00000562199 NMNAT3Q96T66 252 aa4.39□□□□□ -1.71
CAPN3-211ENST00000562199 PNRC2Q9NPJ4 139 aaKnown RBP4.39□□□□□ -1.71
CAPN3-211ENST00000562199 TMEM9BQ9NQ34 198 aa4.39□□□□□ -1.71
CAPN3-211ENST00000562199 RPUSD1Q9UJJ7 312 aaKnown RBP4.39□□□□□ -1.71
CAPN3-211ENST00000562199 TMEM14AQ9Y6G1 99 aa4.39□□□□□ -1.71
CAPN3-211ENST00000562199 IGKV1D-42A0A075B6H8 117 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.38□□□□□ -1.71
CAPN3-211ENST00000562199 TMEM262E9PQX1 116 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 H7C1H1 209 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 M0R1X1 148 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 ISLRO14498 428 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 HLA-DRB1P01911 266 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 GP1BBP13224 206 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 CTLA4P16410 223 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 CA6P23280 308 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 CD38P28907 300 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 RBMXP38159 391 aaKnown RBP4.38□□□□□ -1.71
CAPN3-211ENST00000562199 NMUP48645 174 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 FOXA3P55318 350 aaPredicted RBP4.38□□□□□ -1.71
CAPN3-211ENST00000562199 TMEM258P61165 79 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 CFHR3Q02985 330 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 POU3F1Q03052 451 aaPredicted RBP4.38□□□□□ -1.71
CAPN3-211ENST00000562199 COL10A1Q03692 680 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 ECSCRQ19T08 205 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 VMA21Q3ZAQ7 101 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 WDR38Q5JTN6 314 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 AADACL3Q5VUY0 350 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 DGAT2L6Q6ZPD8 337 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 SHISA6Q6ZSJ9 500 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 SSX8Q7RTT4 187 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 OR10J6PQ8NGY7 276 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 ATP6V0E2Q8NHE4 81 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 PPP1R1CQ8WVI7 109 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 FAM3DQ96BQ1 224 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 DPH3Q96FX2 82 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 IGF2BP2-AS1Q96M15 143 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 MRPL20Q9BYC9 149 aaKnown RBP4.38□□□□□ -1.71
CAPN3-211ENST00000562199 SPRY4Q9C004 299 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 OR10A2Q9H208 303 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 KLK13Q9UKR3 277 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 VSIG4Q9Y279 399 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 ZNF257Q9Y2Q1 563 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 WASHC3Q9Y3C0 194 aa4.38□□□□□ -1.71
CAPN3-211ENST00000562199 TRAV8-2A0A0B4J237 113 aa4.37□□□□□ -1.71
CAPN3-211ENST00000562199 TRAV8-4A0A0B4J246 113 aa4.37□□□□□ -1.71
CAPN3-211ENST00000562199 PLAC8L1A1L4L8 177 aa4.37□□□□□ -1.71
CAPN3-211ENST00000562199 ZNF736B4DX44 427 aaPredicted RBP4.37□□□□□ -1.71
CAPN3-211ENST00000562199 F6UB75 175 aa4.37□□□□□ -1.71
CAPN3-211ENST00000562199 F8W1H4 67 aa4.37□□□□□ -1.71
CAPN3-211ENST00000562199 LINC01619G3V211 115 aa4.37□□□□□ -1.71
CAPN3-211ENST00000562199 J3QT63 122 aa4.37□□□□□ -1.71
CAPN3-211ENST00000562199 TNFSF12O43508 249 aa4.37□□□□□ -1.71
CAPN3-211ENST00000562199 NEURL1O76050 574 aa4.37□□□□□ -1.71
CAPN3-211ENST00000562199 TRGC2P03986 189 aa4.37□□□□□ -1.71
CAPN3-211ENST00000562199 SFTA3P0C7M3 94 aa4.37□□□□□ -1.71
CAPN3-211ENST00000562199 SLC25A6P12236 298 aa4.37□□□□□ -1.71
CAPN3-211ENST00000562199 HLA-DRB3P79483 266 aa4.37□□□□□ -1.71
CAPN3-211ENST00000562199 ELOCQ15369 112 aa4.37□□□□□ -1.71
CAPN3-211ENST00000562199 TMEM30BQ3MIR4 351 aa4.37□□□□□ -1.71
CAPN3-211ENST00000562199 ZNF718Q3SXZ3 478 aa4.37□□□□□ -1.71
CAPN3-211ENST00000562199 GAGE13Q4V321 117 aa4.37□□□□□ -1.71
CAPN3-211ENST00000562199 PVRIGQ6DKI7 326 aa4.37□□□□□ -1.71
CAPN3-211ENST00000562199 KCTD18Q6PI47 426 aaPredicted RBP4.37□□□□□ -1.71
CAPN3-211ENST00000562199 Q6ZSN1 163 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms