RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 EML6Q6ZMW3 1958 aa15.25■□□□□ 0.03
RAB40C-206ENST00000561781 A0A1B0GXF2 115 aa15.25■□□□□ 0.03
RAB40C-206ENST00000561781 SMAD7O15105 426 aaKnown RBP15.25■□□□□ 0.03
RAB40C-206ENST00000561781 WISP2O76076 250 aa15.25■□□□□ 0.03
RAB40C-206ENST00000561781 FCGR2BP31994 310 aaPredicted RBP15.25■□□□□ 0.03
RAB40C-206ENST00000561781 TMPRSS3P57727 454 aa15.25■□□□□ 0.03
RAB40C-206ENST00000561781 SSBP2P81877 361 aaPredicted RBP15.25■□□□□ 0.03
RAB40C-206ENST00000561781 IL11RAQ14626 422 aa15.25■□□□□ 0.03
RAB40C-206ENST00000561781 H2BFWTQ7Z2G1 175 aa15.25■□□□□ 0.03
RAB40C-206ENST00000561781 GALMQ96C23 342 aa15.25■□□□□ 0.03
RAB40C-206ENST00000561781 ZNF355PQ9NSJ1 428 aa15.25■□□□□ 0.03
RAB40C-206ENST00000561781 LOC102723996A0A087X1L8 192 aa15.25■□□□□ 0.03
RAB40C-206ENST00000561781 TRBV7-9A0A0J9YWB2 115 aa15.25■□□□□ 0.03
RAB40C-206ENST00000561781 VSTM5A8MXK1 200 aa15.25■□□□□ 0.03
RAB40C-206ENST00000561781 RPL30P62888 115 aaKnown RBP15.25■□□□□ 0.03
RAB40C-206ENST00000561781 RTL8BQ17RB0 113 aa15.25■□□□□ 0.03
RAB40C-206ENST00000561781 TEPPQ6URK8 271 aa15.25■□□□□ 0.03
RAB40C-206ENST00000561781 ZBTB34Q8NCN2 500 aa15.25■□□□□ 0.03
RAB40C-206ENST00000561781 SH2D2AQ9NP31 389 aa15.25■□□□□ 0.03
RAB40C-206ENST00000561781 ACACBO00763 2458 aa15.25■□□□□ 0.03
RAB40C-206ENST00000561781 HERV-K104P63124 156 aa15.24■□□□□ 0.03
RAB40C-206ENST00000561781 GAGE5Q13069 117 aa15.24■□□□□ 0.03
RAB40C-206ENST00000561781 GAGE6Q13070 117 aa15.24■□□□□ 0.03
RAB40C-206ENST00000561781 NBEAQ8NFP9 2946 aa15.24■□□□□ 0.03
RAB40C-206ENST00000561781 WFDC2Q14508 124 aa15.24■□□□□ 0.03
RAB40C-206ENST00000561781 PSG5Q15238 335 aa15.24■□□□□ 0.03
RAB40C-206ENST00000561781 TMEM164Q5U3C3 297 aa15.24■□□□□ 0.03
RAB40C-206ENST00000561781 C8orf86Q6ZUL3 223 aa15.24■□□□□ 0.03
RAB40C-206ENST00000561781 C1QTNF5Q9BXJ0 243 aa15.24■□□□□ 0.03
RAB40C-206ENST00000561781 FOXA3P55318 350 aaPredicted RBP15.23■□□□□ 0.03
RAB40C-206ENST00000561781 HBBP68871 147 aa15.23■□□□□ 0.03
RAB40C-206ENST00000561781 NRN1LQ496H8 165 aa15.23■□□□□ 0.03
RAB40C-206ENST00000561781 SSMEM1Q8WWF3 244 aa15.23■□□□□ 0.03
RAB40C-206ENST00000561781 ABHD17AQ96GS6 310 aa15.23■□□□□ 0.03
RAB40C-206ENST00000561781 TEX50A0A1B0GTY4 177 aa15.23■□□□□ 0.03
RAB40C-206ENST00000561781 HIGD1CA8MV81 97 aa15.23■□□□□ 0.03
RAB40C-206ENST00000561781 TAS2R45P59539 299 aa15.23■□□□□ 0.03
RAB40C-206ENST00000561781 CATR1Q13166 79 aa15.23■□□□□ 0.03
RAB40C-206ENST00000561781 GTSF1Q8WW33 167 aa15.23■□□□□ 0.03
RAB40C-206ENST00000561781 RNF183Q96D59 192 aa15.23■□□□□ 0.03
RAB40C-206ENST00000561781 SNRNP40Q96DI7 357 aaKnown RBP15.23■□□□□ 0.03
RAB40C-206ENST00000561781 GCM1Q9NP62 436 aa15.23■□□□□ 0.03
RAB40C-206ENST00000561781 GPR12P47775 334 aa15.22■□□□□ 0.03
RAB40C-206ENST00000561781 ATP5G2Q06055 141 aa15.22■□□□□ 0.03
RAB40C-206ENST00000561781 FOXB1Q99853 325 aa15.22■□□□□ 0.03
RAB40C-206ENST00000561781 A0A1W2PRD5 423 aa15.22■□□□□ 0.03
RAB40C-206ENST00000561781 A0A1W2PRF3 423 aa15.22■□□□□ 0.03
RAB40C-206ENST00000561781 A0A1W2PRM7 423 aa15.22■□□□□ 0.03
RAB40C-206ENST00000561781 SPINK8P0C7L1 97 aa15.22■□□□□ 0.03
RAB40C-206ENST00000561781 CT45A6P0DMU7 189 aa15.22■□□□□ 0.03
RAB40C-206ENST00000561781 CT45A5P0DMU8 189 aa15.22■□□□□ 0.03
RAB40C-206ENST00000561781 CT45A7P0DMV0 189 aa15.22■□□□□ 0.03
RAB40C-206ENST00000561781 CA6P23280 308 aa15.22■□□□□ 0.03
RAB40C-206ENST00000561781 GATA3P23771 443 aa15.22■□□□□ 0.03
RAB40C-206ENST00000561781 KIR2DL2P43627 348 aaPredicted RBP15.22■□□□□ 0.03
RAB40C-206ENST00000561781 BRWD1-AS2P59051 145 aa15.22■□□□□ 0.03
RAB40C-206ENST00000561781 CT45A1Q5HYN5 189 aa15.22■□□□□ 0.03
RAB40C-206ENST00000561781 ZNF808Q8N4W9 903 aaPredicted RBP15.22■□□□□ 0.03
RAB40C-206ENST00000561781 CT45A3Q8NHU0 189 aa15.22■□□□□ 0.03
RAB40C-206ENST00000561781 SRXN1Q9BYN0 137 aa15.22■□□□□ 0.03
RAB40C-206ENST00000561781 MSRB2Q9Y3D2 182 aa15.22■□□□□ 0.03
RAB40C-206ENST00000561781 LSM4Q9Y4Z0 139 aaKnown RBP15.22■□□□□ 0.03
RAB40C-206ENST00000561781 C17orf98A8MV24 154 aa15.21■□□□□ 0.03
RAB40C-206ENST00000561781 FAM214BQ7L5A3 538 aa15.21■□□□□ 0.03
RAB40C-206ENST00000561781 SPRY4Q9C004 299 aa15.21■□□□□ 0.03
RAB40C-206ENST00000561781 PLEKHA3Q9HB20 300 aa15.21■□□□□ 0.03
RAB40C-206ENST00000561781 USF3Q68DE3 2245 aa15.21■□□□□ 0.02
RAB40C-206ENST00000561781 ETDBQ3ZM63 59 aa15.21■□□□□ 0.02
RAB40C-206ENST00000561781 ACP7Q6ZNF0 438 aa15.21■□□□□ 0.02
RAB40C-206ENST00000561781 PRDM14Q9GZV8 571 aa15.21■□□□□ 0.02
RAB40C-206ENST00000561781 URB1O60287 2271 aaKnown RBP15.2■□□□□ 0.02
RAB40C-206ENST00000561781 NCKAP5O14513 1909 aa15.2■□□□□ 0.02
RAB40C-206ENST00000561781 TRAT1Q6PIZ9 186 aa15.2■□□□□ 0.02
RAB40C-206ENST00000561781 WDR31Q8NA23 367 aa15.2■□□□□ 0.02
RAB40C-206ENST00000561781 NDFIP1Q9BT67 221 aa15.2■□□□□ 0.02
RAB40C-206ENST00000561781 SOX21Q9Y651 276 aaPredicted RBP15.2■□□□□ 0.02
RAB40C-206ENST00000561781 A0A0J9YW62 118 aa15.19■□□□□ 0.02
RAB40C-206ENST00000561781 GGTLC3B5MD39 225 aa15.19■□□□□ 0.02
RAB40C-206ENST00000561781 CLEC3BP05452 202 aa15.19■□□□□ 0.02
RAB40C-206ENST00000561781 MAP1BP46821 2468 aaKnown RBP15.19■□□□□ 0.02
RAB40C-206ENST00000561781 ZFAND5O76080 213 aa15.19■□□□□ 0.02
RAB40C-206ENST00000561781 PCBD1P61457 104 aa15.19■□□□□ 0.02
RAB40C-206ENST00000561781 ASPHD1Q5U4P2 390 aa15.19■□□□□ 0.02
RAB40C-206ENST00000561781 C6orf15Q6UXA7 325 aaPredicted RBP15.19■□□□□ 0.02
RAB40C-206ENST00000561781 ZNF502Q8TBZ5 544 aa15.19■□□□□ 0.02
RAB40C-206ENST00000561781 ZNF747Q9BV97 191 aa15.19■□□□□ 0.02
RAB40C-206ENST00000561781 CHCHD2Q9Y6H1 151 aaPredicted RBP15.19■□□□□ 0.02
RAB40C-206ENST00000561781 hADV38S2A0JD32 116 aa15.18■□□□□ 0.02
RAB40C-206ENST00000561781 PRSS46E5RG02 174 aa15.18■□□□□ 0.02
RAB40C-206ENST00000561781 CCL2P13500 99 aa15.18■□□□□ 0.02
RAB40C-206ENST00000561781 WT1P19544 449 aaPredicted RBP15.18■□□□□ 0.02
RAB40C-206ENST00000561781 ATP1A1-AS1Q5TC04 95 aa15.18■□□□□ 0.02
RAB40C-206ENST00000561781 Q6ZR03 302 aa15.18■□□□□ 0.02
RAB40C-206ENST00000561781 MIR17HGQ75NE6 70 aa15.18■□□□□ 0.02
RAB40C-206ENST00000561781 SH2D6Q7Z4S9 175 aa15.18■□□□□ 0.02
RAB40C-206ENST00000561781 INSIG2Q9Y5U4 225 aa15.18■□□□□ 0.02
RAB40C-206ENST00000561781 ZNF497Q6ZNH5 498 aa15.18■□□□□ 0.02
RAB40C-206ENST00000561781 ZADH2Q8N4Q0 377 aa15.18■□□□□ 0.02
RAB40C-206ENST00000561781 HEYLQ9NQ87 328 aaPredicted RBP15.18■□□□□ 0.02
RAB40C-206ENST00000561781 BSNQ9UPA5 3926 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms