RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 ERVK-16P61578 105 aa8.25□□□□□ -1.09
TUBGCP4-202ENST00000561691 HSPE1P61604 102 aaKnown RBP8.25□□□□□ -1.09
TUBGCP4-202ENST00000561691 HBG1P69891 147 aa8.25□□□□□ -1.09
TUBGCP4-202ENST00000561691 HBG2P69892 147 aa8.25□□□□□ -1.09
TUBGCP4-202ENST00000561691 FOXL1Q12952 345 aa8.25□□□□□ -1.09
TUBGCP4-202ENST00000561691 PRSS57Q6UWY2 283 aa8.25□□□□□ -1.09
TUBGCP4-202ENST00000561691 OR4A16Q8NH70 328 aa8.25□□□□□ -1.09
TUBGCP4-202ENST00000561691 NEIL1Q96FI4 390 aaPredicted RBP8.25□□□□□ -1.09
TUBGCP4-202ENST00000561691 CLUHP3Q96NS8 147 aa8.25□□□□□ -1.09
TUBGCP4-202ENST00000561691 ZNF430Q9H8G1 570 aaPredicted RBP8.25□□□□□ -1.09
TUBGCP4-202ENST00000561691 PATZ1Q9HBE1 687 aaKnown RBP8.25□□□□□ -1.09
TUBGCP4-202ENST00000561691 IGKV1D-33P01593 117 aa8.24□□□□□ -1.09
TUBGCP4-202ENST00000561691 IGKV1-33P01594 117 aa8.24□□□□□ -1.09
TUBGCP4-202ENST00000561691 SAA1P0DJI8 122 aaPredicted RBP8.24□□□□□ -1.09
TUBGCP4-202ENST00000561691 PNKDQ8N490 385 aa8.24□□□□□ -1.09
TUBGCP4-202ENST00000561691 OR5B3Q8NH48 314 aa8.24□□□□□ -1.09
TUBGCP4-202ENST00000561691 TMEM186Q96B77 213 aa8.24□□□□□ -1.09
TUBGCP4-202ENST00000561691 RITA1Q96K30 269 aa8.24□□□□□ -1.09
TUBGCP4-202ENST00000561691 BBC3Q96PG8 261 aaPredicted RBP8.24□□□□□ -1.09
TUBGCP4-202ENST00000561691 UHRF2Q96PU4 802 aa8.24□□□□□ -1.09
TUBGCP4-202ENST00000561691 TMEM147Q9BVK8 224 aa8.24□□□□□ -1.09
TUBGCP4-202ENST00000561691 UBE2L5PA0A1B0GUS4 154 aa8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 CGB1A6NKQ9 187 aa8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 LY6LH3BQJ8 138 aa8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 K7ERU9 68 aa8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 RBMXL2O75526 392 aaKnown RBP8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 PSG1P11464 419 aa8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 Q0VG73 95 aa8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 FFAR4Q5NUL3 377 aa8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 HCP5Q6MZN7 132 aa8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 TCF24Q7RTU0 167 aa8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 KLHDC1Q8N7A1 406 aa8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 OSR1Q8TAX0 266 aaPredicted RBP8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 CHODLQ9H9P2 273 aa8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 ZNF586Q9NXT0 402 aa8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 TIMM9Q9Y5J7 89 aa8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 TNCP24821 2201 aa8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 PPIAL4CA0A0B4J2A2 164 aa8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 TEX50A0A1B0GTY4 177 aa8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 OVOL3O00110 214 aa8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 PPIAL4GP0DN37 164 aa8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 SERF2P84101 59 aa8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 VAMP3Q15836 100 aa8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 RTL8BQ17RB0 113 aa8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 HLA-DRB5Q30154 266 aa8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 ACSM6Q6P461 480 aa8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 OR10P1Q8NGE3 313 aa8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 OR8B3Q8NGG8 313 aa8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 OR4P4Q8NGL7 312 aa8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 OR10X1Q8NGY0 326 aa8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 OR8B2Q96RD0 313 aa8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 ZNF257Q9Y2Q1 563 aa8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 COL12A1Q99715 3063 aa8.23□□□□□ -1.09
TUBGCP4-202ENST00000561691 TRAV34A0A0B4J273 112 aa8.22□□□□□ -1.09
TUBGCP4-202ENST00000561691 E7EUB6 86 aa8.22□□□□□ -1.09
TUBGCP4-202ENST00000561691 GPX1P07203 203 aa8.22□□□□□ -1.09
TUBGCP4-202ENST00000561691 CRISP2P16562 243 aa8.22□□□□□ -1.09
TUBGCP4-202ENST00000561691 KRTDAPP60985 99 aa8.22□□□□□ -1.09
TUBGCP4-202ENST00000561691 PRCDQ00LT1 54 aa8.22□□□□□ -1.09
TUBGCP4-202ENST00000561691 OR4F17Q8NGA8 305 aa8.22□□□□□ -1.09
TUBGCP4-202ENST00000561691 RAB1CQ92928 201 aa8.22□□□□□ -1.09
TUBGCP4-202ENST00000561691 PINX1Q96BK5 328 aaKnown RBP8.22□□□□□ -1.09
TUBGCP4-202ENST00000561691 OR4F4Q96R69 305 aa8.22□□□□□ -1.09
TUBGCP4-202ENST00000561691 SAMD10Q9BYL1 202 aa8.22□□□□□ -1.09
TUBGCP4-202ENST00000561691 PRNDQ9UKY0 176 aa8.22□□□□□ -1.09
TUBGCP4-202ENST00000561691 WDR83OSQ9Y284 106 aa8.22□□□□□ -1.09
TUBGCP4-202ENST00000561691 OR51B2Q9Y5P1 312 aa8.22□□□□□ -1.09
TUBGCP4-202ENST00000561691 TACC2O95359 2948 aa8.21□□□□□ -1.09
TUBGCP4-202ENST00000561691 F2Z2F3 143 aa8.21□□□□□ -1.09
TUBGCP4-202ENST00000561691 CRYGBP07316 175 aa8.21□□□□□ -1.09
TUBGCP4-202ENST00000561691 PSMB3P49720 205 aa8.21□□□□□ -1.09
TUBGCP4-202ENST00000561691 PAX2Q02962 417 aa8.21□□□□□ -1.09
TUBGCP4-202ENST00000561691 PRR27Q6MZM9 219 aa8.21□□□□□ -1.09
TUBGCP4-202ENST00000561691 PDPNQ86YL7 162 aa8.21□□□□□ -1.09
TUBGCP4-202ENST00000561691 RPP25LQ8N5L8 163 aaKnown RBP8.21□□□□□ -1.09
TUBGCP4-202ENST00000561691 SIGLECL1Q8N7X8 197 aa8.21□□□□□ -1.09
TUBGCP4-202ENST00000561691 TMEM167AQ8TBQ9 72 aa8.21□□□□□ -1.09
TUBGCP4-202ENST00000561691 SCGB1C1Q8TD33 95 aa8.21□□□□□ -1.09
TUBGCP4-202ENST00000561691 LHX4Q969G2 390 aa8.21□□□□□ -1.09
TUBGCP4-202ENST00000561691 NPCDR1Q9BY65 106 aa8.21□□□□□ -1.09
TUBGCP4-202ENST00000561691 UBTD1Q9HAC8 227 aa8.21□□□□□ -1.09
TUBGCP4-202ENST00000561691 HEYLQ9NQ87 328 aaPredicted RBP8.21□□□□□ -1.09
TUBGCP4-202ENST00000561691 INS-IGF2F8WCM5 200 aa8.21□□□□□ -1.1
TUBGCP4-202ENST00000561691 BUB1B-PAK6H3BSN5 160 aa8.21□□□□□ -1.1
TUBGCP4-202ENST00000561691 TAX1BP3O14907 124 aa8.21□□□□□ -1.1
TUBGCP4-202ENST00000561691 ZNF253O75346 499 aa8.21□□□□□ -1.1
TUBGCP4-202ENST00000561691 CA2P00918 260 aa8.21□□□□□ -1.1
TUBGCP4-202ENST00000561691 APOA2P02652 100 aa8.21□□□□□ -1.1
TUBGCP4-202ENST00000561691 REG1AP05451 166 aa8.21□□□□□ -1.1
TUBGCP4-202ENST00000561691 ZFP36P26651 326 aaKnown RBP8.21□□□□□ -1.1
TUBGCP4-202ENST00000561691 HARBI1Q96MB7 349 aa8.21□□□□□ -1.1
TUBGCP4-202ENST00000561691 CLEC7AQ9BXN2 247 aa8.21□□□□□ -1.1
TUBGCP4-202ENST00000561691 TPSG1Q9NRR2 321 aa8.21□□□□□ -1.1
TUBGCP4-202ENST00000561691 NDUFA4L2Q9NRX3 87 aa8.21□□□□□ -1.1
TUBGCP4-202ENST00000561691 WASHC3Q9Y3C0 194 aa8.21□□□□□ -1.1
TUBGCP4-202ENST00000561691 LSM4Q9Y4Z0 139 aaKnown RBP8.21□□□□□ -1.1
TUBGCP4-202ENST00000561691 SPTAN1Q13813 2472 aaKnown RBP8.2□□□□□ -1.1
TUBGCP4-202ENST00000561691 CACNA1BQ00975 2339 aa8.2□□□□□ -1.1
TUBGCP4-202ENST00000561691 A6NJY4 79 aa8.2□□□□□ -1.1
TUBGCP4-202ENST00000561691 ODF3BA8MYP8 253 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms