RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 Q6ZS49 121 aa6.73□□□□□ -1.33
HERC1-210ENST00000560897 KCTD9Q7L273 389 aa6.73□□□□□ -1.33
HERC1-210ENST00000560897 TMEM229BQ8NBD8 167 aa6.73□□□□□ -1.33
HERC1-210ENST00000560897 TMEM167AQ8TBQ9 72 aa6.73□□□□□ -1.33
HERC1-210ENST00000560897 C5orf30Q96GV9 206 aa6.73□□□□□ -1.33
HERC1-210ENST00000560897 ATP6V0BQ99437 205 aa6.73□□□□□ -1.33
HERC1-210ENST00000560897 GINS3Q9BRX5 216 aa6.73□□□□□ -1.33
HERC1-210ENST00000560897 ZNF2Q9BSG1 426 aaPredicted RBP6.73□□□□□ -1.33
HERC1-210ENST00000560897 TRBV6-7A0A0A0MS04 114 aa6.72□□□□□ -1.33
HERC1-210ENST00000560897 IGKV1-6A0A0C4DH72 117 aa6.72□□□□□ -1.33
HERC1-210ENST00000560897 RPS10-NUDT3A0A1W2PQS6 291 aa6.72□□□□□ -1.33
HERC1-210ENST00000560897 NUDT3O95989 172 aa6.72□□□□□ -1.33
HERC1-210ENST00000560897 PGAM2P15259 253 aa6.72□□□□□ -1.33
HERC1-210ENST00000560897 HLA-GP17693 338 aa6.72□□□□□ -1.33
HERC1-210ENST00000560897 LORP23490 312 aaPredicted RBP6.72□□□□□ -1.33
HERC1-210ENST00000560897 NFYAP23511 347 aaPredicted RBP6.72□□□□□ -1.33
HERC1-210ENST00000560897 HRH1P35367 487 aa6.72□□□□□ -1.33
HERC1-210ENST00000560897 RFX2P48378 723 aa6.72□□□□□ -1.33
HERC1-210ENST00000560897 DEFA1P59665 94 aa6.72□□□□□ -1.33
HERC1-210ENST00000560897 DEFA3P59666 94 aa6.72□□□□□ -1.33
HERC1-210ENST00000560897 CLINT1Q14677 625 aa6.72□□□□□ -1.33
HERC1-210ENST00000560897 OXA1LQ15070 435 aa6.72□□□□□ -1.33
HERC1-210ENST00000560897 FAM222AQ5U5X8 452 aa6.72□□□□□ -1.33
HERC1-210ENST00000560897 SLC25A24Q6NUK1 477 aa6.72□□□□□ -1.33
HERC1-210ENST00000560897 CMTM1Q8IZ96 169 aa6.72□□□□□ -1.33
HERC1-210ENST00000560897 FAM24BQ8N5W8 94 aa6.72□□□□□ -1.33
HERC1-210ENST00000560897 CLRN3Q8NCR9 226 aa6.72□□□□□ -1.33
HERC1-210ENST00000560897 OR4S2Q8NH73 311 aa6.72□□□□□ -1.33
HERC1-210ENST00000560897 FAM210AQ96ND0 272 aa6.72□□□□□ -1.33
HERC1-210ENST00000560897 PRRT1Q99946 306 aa6.72□□□□□ -1.33
HERC1-210ENST00000560897 CCDC32Q9BV29 185 aa6.72□□□□□ -1.33
HERC1-210ENST00000560897 TMEM231Q9H6L2 316 aa6.72□□□□□ -1.33
HERC1-210ENST00000560897 XCL2Q9UBD3 114 aa6.72□□□□□ -1.33
HERC1-210ENST00000560897 DKK2Q9UBU2 259 aa6.72□□□□□ -1.33
HERC1-210ENST00000560897 PUS1Q9Y606 427 aaKnown RBP eCLIP6.72□□□□□ -1.33
HERC1-210ENST00000560897 RFNGQ9Y644 331 aa6.72□□□□□ -1.33
HERC1-210ENST00000560897 IGHV3OR16-12A0A075B7B8 117 aa6.71□□□□□ -1.34
HERC1-210ENST00000560897 IGHV3-21A0A0B4J1V1 117 aa6.71□□□□□ -1.34
HERC1-210ENST00000560897 NAP1L6A6NFF2 107 aa6.71□□□□□ -1.34
HERC1-210ENST00000560897 SMIM9A6NGZ8 99 aa6.71□□□□□ -1.34
HERC1-210ENST00000560897 M0QYG6 137 aa6.71□□□□□ -1.34
HERC1-210ENST00000560897 CD3DP04234 171 aa6.71□□□□□ -1.34
HERC1-210ENST00000560897 OR2B8PP59922 312 aa6.71□□□□□ -1.34
HERC1-210ENST00000560897 ERVFC1-1P60608 527 aa6.71□□□□□ -1.34
HERC1-210ENST00000560897 DAD1P61803 113 aa6.71□□□□□ -1.34
HERC1-210ENST00000560897 LYSMD2Q8IV50 215 aa6.71□□□□□ -1.34
HERC1-210ENST00000560897 PUSL1Q8N0Z8 303 aaKnown RBP6.71□□□□□ -1.34
HERC1-210ENST00000560897 ARRDC1Q8N5I2 433 aa6.71□□□□□ -1.34
HERC1-210ENST00000560897 ZBTB34Q8NCN2 500 aa6.71□□□□□ -1.34
HERC1-210ENST00000560897 STXBP6Q8NFX7 210 aa6.71□□□□□ -1.34
HERC1-210ENST00000560897 ZFAND1Q8TCF1 268 aa6.71□□□□□ -1.34
HERC1-210ENST00000560897 SECTM1Q8WVN6 248 aa6.71□□□□□ -1.34
HERC1-210ENST00000560897 DEDD2Q8WXF8 326 aa6.71□□□□□ -1.34
HERC1-210ENST00000560897 ZNF414Q96IQ9 312 aa6.71□□□□□ -1.34
HERC1-210ENST00000560897 NEU1Q99519 415 aa6.71□□□□□ -1.34
HERC1-210ENST00000560897 CABLES2Q9BTV7 478 aa6.71□□□□□ -1.34
HERC1-210ENST00000560897 SRRQ9GZT4 340 aa6.71□□□□□ -1.34
HERC1-210ENST00000560897 SLC5A7Q9GZV3 580 aa6.71□□□□□ -1.34
HERC1-210ENST00000560897 Q9H8V8 135 aa6.71□□□□□ -1.34
HERC1-210ENST00000560897 HRASLSQ9HDD0 168 aa6.71□□□□□ -1.34
HERC1-210ENST00000560897 OR2W1Q9Y3N9 320 aa6.71□□□□□ -1.34
HERC1-210ENST00000560897 V9GYH0 126 aa6.71□□□□□ -1.34
HERC1-210ENST00000560897 IGKV1D-8A0A087WSZ0 117 aa6.7□□□□□ -1.34
HERC1-210ENST00000560897 RGS13O14921 159 aa6.7□□□□□ -1.34
HERC1-210ENST00000560897 HRASP01112 189 aa6.7□□□□□ -1.34
HERC1-210ENST00000560897 PPYP01298 95 aa6.7□□□□□ -1.34
HERC1-210ENST00000560897 ZNF688P0C7X2 276 aa6.7□□□□□ -1.34
HERC1-210ENST00000560897 GNRHRP30968 328 aa6.7□□□□□ -1.34
HERC1-210ENST00000560897 CATR1Q13166 79 aa6.7□□□□□ -1.34
HERC1-210ENST00000560897 USF2Q15853 346 aaPredicted RBP6.7□□□□□ -1.34
HERC1-210ENST00000560897 DHRS11Q6UWP2 260 aa6.7□□□□□ -1.34
HERC1-210ENST00000560897 TERB2Q8NHR7 220 aa6.7□□□□□ -1.34
HERC1-210ENST00000560897 ST8SIA2Q92186 375 aa6.7□□□□□ -1.34
HERC1-210ENST00000560897 GRAMD2BQ96HH9 432 aa6.7□□□□□ -1.34
HERC1-210ENST00000560897 OR10C1Q96KK4 312 aa6.7□□□□□ -1.34
HERC1-210ENST00000560897 SOSTQ9BQB4 213 aa6.7□□□□□ -1.34
HERC1-210ENST00000560897 C7orf50Q9BRJ6 194 aaKnown RBP6.7□□□□□ -1.34
HERC1-210ENST00000560897 SRSF8Q9BRL6 282 aaKnown RBP6.7□□□□□ -1.34
HERC1-210ENST00000560897 COMMD5Q9GZQ3 224 aa6.7□□□□□ -1.34
HERC1-210ENST00000560897 C14orf166Q9Y224 244 aaKnown RBP6.7□□□□□ -1.34
HERC1-210ENST00000560897 LINC00588Q9Y4M8 146 aa6.7□□□□□ -1.34
HERC1-210ENST00000560897 IGLC7A0M8Q6 106 aa6.69□□□□□ -1.34
HERC1-210ENST00000560897 ANKRD20A5PA0PJZ0 165 aa6.69□□□□□ -1.34
HERC1-210ENST00000560897 PLA2G1BP04054 148 aaKnown RBP6.69□□□□□ -1.34
HERC1-210ENST00000560897 IL7P13232 177 aa6.69□□□□□ -1.34
HERC1-210ENST00000560897 FUSP35637 526 aaKnown RBP eCLIP6.69□□□□□ -1.34
HERC1-210ENST00000560897 H1FOOQ8IZA3 346 aaPredicted RBP6.69□□□□□ -1.34
HERC1-210ENST00000560897 CCDC71LQ8N9Z2 235 aa6.69□□□□□ -1.34
HERC1-210ENST00000560897 DEFB104AQ8WTQ1 72 aa6.69□□□□□ -1.34
HERC1-210ENST00000560897 SCARB1Q8WTV0 552 aa6.69□□□□□ -1.34
HERC1-210ENST00000560897 TCTEX1D2Q8WW35 142 aa6.69□□□□□ -1.34
HERC1-210ENST00000560897 AIFM2Q9BRQ8 373 aa6.69□□□□□ -1.34
HERC1-210ENST00000560897 COPZ2Q9P299 210 aa6.69□□□□□ -1.34
HERC1-210ENST00000560897 IGHV3-66A0A0C4DH42 116 aa6.68□□□□□ -1.34
HERC1-210ENST00000560897 TEX13DA0A0J9YY54 714 aaPredicted RBP6.68□□□□□ -1.34
HERC1-210ENST00000560897 FAM240BA0A1B0GVZ2 78 aa6.68□□□□□ -1.34
HERC1-210ENST00000560897 A0A1W2PPQ1 181 aa6.68□□□□□ -1.34
HERC1-210ENST00000560897 GPR31O00270 319 aa6.68□□□□□ -1.34
HERC1-210ENST00000560897 RLN1P04808 185 aa6.68□□□□□ -1.34
HERC1-210ENST00000560897 OR13C7P0DN81 318 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms