RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 KCNIP2Q9NS61 270 aa8.81□□□□□ -1
SNX1-212ENST00000560861 TNFRSF19Q9NS68 423 aa8.81□□□□□ -1
SNX1-212ENST00000560861 SLC39A9Q9NUM3 307 aa8.81□□□□□ -1
SNX1-212ENST00000560861 DNHD1Q96M86 4753 aa8.81□□□□□ -1
SNX1-212ENST00000560861 TRAV1-1A0A0B4J248 108 aa8.8□□□□□ -1
SNX1-212ENST00000560861 CYB5BO43169 146 aa8.8□□□□□ -1
SNX1-212ENST00000560861 OR2J3O76001 311 aa8.8□□□□□ -1
SNX1-212ENST00000560861 IGKV1-17P01599 117 aa8.8□□□□□ -1
SNX1-212ENST00000560861 DEFA5Q01523 94 aa8.8□□□□□ -1
SNX1-212ENST00000560861 TMEM95Q3KNT9 176 aa8.8□□□□□ -1
SNX1-212ENST00000560861 GCSAMLQ5JQS6 135 aa8.8□□□□□ -1
SNX1-212ENST00000560861 NECAP1Q8NC96 275 aa8.8□□□□□ -1
SNX1-212ENST00000560861 FAM213BQ8TBF2 198 aa8.8□□□□□ -1
SNX1-212ENST00000560861 ZNF502Q8TBZ5 544 aa8.8□□□□□ -1
SNX1-212ENST00000560861 RCC1LQ96I51 464 aaKnown RBP8.8□□□□□ -1
SNX1-212ENST00000560861 SCRT1Q9BWW7 348 aa8.8□□□□□ -1
SNX1-212ENST00000560861 NPFFR1Q9GZQ6 430 aa8.8□□□□□ -1
SNX1-212ENST00000560861 GSX1Q9H4S2 264 aaPredicted RBP8.8□□□□□ -1
SNX1-212ENST00000560861 LINC00527Q9UJ94 153 aa8.8□□□□□ -1
SNX1-212ENST00000560861 FBXL7Q9UJT9 491 aa8.8□□□□□ -1
SNX1-212ENST00000560861 TSPAN15O95858 294 aa8.79□□□□□ -1
SNX1-212ENST00000560861 MBP02144 154 aa8.79□□□□□ -1
SNX1-212ENST00000560861 M6PRP20645 277 aa8.79□□□□□ -1
SNX1-212ENST00000560861 GATA2P23769 480 aaPredicted RBP8.79□□□□□ -1
SNX1-212ENST00000560861 B2MP61769 119 aa8.79□□□□□ -1
SNX1-212ENST00000560861 RHOGP84095 191 aa8.79□□□□□ -1
SNX1-212ENST00000560861 ZNF90Q03938 601 aa8.79□□□□□ -1
SNX1-212ENST00000560861 RAB31Q13636 194 aa8.79□□□□□ -1
SNX1-212ENST00000560861 ACOT6Q3I5F7 207 aaPredicted RBP8.79□□□□□ -1
SNX1-212ENST00000560861 BPIFCQ8NFQ6 507 aa8.79□□□□□ -1
SNX1-212ENST00000560861 PRSS22Q9GZN4 317 aa8.79□□□□□ -1
SNX1-212ENST00000560861 C21orf62Q9NYP8 219 aa8.79□□□□□ -1
SNX1-212ENST00000560861 THYN1Q9P016 225 aa8.79□□□□□ -1
SNX1-212ENST00000560861 CDC42EP3Q9UKI2 254 aa8.79□□□□□ -1
SNX1-212ENST00000560861 NIPBLQ6KC79 2804 aaeCLIP8.78□□□□□ -1
SNX1-212ENST00000560861 TMEM89A2RUT3 159 aa8.78□□□□□ -1
SNX1-212ENST00000560861 ZFP92A6NM28 416 aa8.78□□□□□ -1
SNX1-212ENST00000560861 MFAP4P55083 255 aa8.78□□□□□ -1
SNX1-212ENST00000560861 PLP1P60201 277 aa8.78□□□□□ -1
SNX1-212ENST00000560861 SELENOTP62341 195 aa8.78□□□□□ -1
SNX1-212ENST00000560861 TIGITQ495A1 244 aa8.78□□□□□ -1
SNX1-212ENST00000560861 COMMD7Q86VX2 200 aa8.78□□□□□ -1
SNX1-212ENST00000560861 EIF4E3Q8N5X7 224 aaKnown RBP8.78□□□□□ -1
SNX1-212ENST00000560861 OR10G4Q8NGN3 311 aa8.78□□□□□ -1
SNX1-212ENST00000560861 OR10G9Q8NGN4 311 aa8.78□□□□□ -1
SNX1-212ENST00000560861 OR10G7Q8NGN6 311 aa8.78□□□□□ -1
SNX1-212ENST00000560861 CCDC140Q96MF4 163 aa8.78□□□□□ -1
SNX1-212ENST00000560861 DUX5Q96PT3 197 aa8.78□□□□□ -1
SNX1-212ENST00000560861 ATP6V0BQ99437 205 aa8.78□□□□□ -1
SNX1-212ENST00000560861 TXN2Q99757 166 aa8.78□□□□□ -1
SNX1-212ENST00000560861 SERTAD4Q9NUC0 356 aa8.78□□□□□ -1
SNX1-212ENST00000560861 S4R3C0 116 aa8.78□□□□□ -1
SNX1-212ENST00000560861 CTXND1A0A1B0GTU2 59 aa8.77□□□□□ -1.01
SNX1-212ENST00000560861 FAM223BA6NKX1 122 aa8.77□□□□□ -1.01
SNX1-212ENST00000560861 NUDT19A8MXV4 375 aa8.77□□□□□ -1.01
SNX1-212ENST00000560861 TEX46H3BTG2 121 aa8.77□□□□□ -1.01
SNX1-212ENST00000560861 IGHG4P01861 327 aa8.77□□□□□ -1.01
SNX1-212ENST00000560861 RNASE1P07998 156 aaKnown RBP8.77□□□□□ -1.01
SNX1-212ENST00000560861 H2AFB1P0C5Y9 115 aa8.77□□□□□ -1.01
SNX1-212ENST00000560861 OR5G3P0C626 314 aa8.77□□□□□ -1.01
SNX1-212ENST00000560861 SRD5A1P18405 259 aa8.77□□□□□ -1.01
SNX1-212ENST00000560861 ADMP35318 185 aa8.77□□□□□ -1.01
SNX1-212ENST00000560861 NPBWR1P48145 328 aa8.77□□□□□ -1.01
SNX1-212ENST00000560861 HILS1P60008 231 aa8.77□□□□□ -1.01
SNX1-212ENST00000560861 YPEL3P61236 119 aaPredicted RBP8.77□□□□□ -1.01
SNX1-212ENST00000560861 CCL20P78556 96 aa8.77□□□□□ -1.01
SNX1-212ENST00000560861 ZNF616Q08AN1 781 aa8.77□□□□□ -1.01
SNX1-212ENST00000560861 SCGB2A2Q13296 93 aa8.77□□□□□ -1.01
SNX1-212ENST00000560861 C15orf32Q32M92 178 aa8.77□□□□□ -1.01
SNX1-212ENST00000560861 SPATA31B1PQ5VZV4 182 aa8.77□□□□□ -1.01
SNX1-212ENST00000560861 FAM122CQ6P4D5 195 aa8.77□□□□□ -1.01
SNX1-212ENST00000560861 PATE2Q6UY27 113 aa8.77□□□□□ -1.01
SNX1-212ENST00000560861 RBMS3Q6XE24 437 aaKnown RBP8.77□□□□□ -1.01
SNX1-212ENST00000560861 IL34Q6ZMJ4 242 aa8.77□□□□□ -1.01
SNX1-212ENST00000560861 FAM223AQ8IWN6 122 aa8.77□□□□□ -1.01
SNX1-212ENST00000560861 MYOZ3Q8TDC0 251 aa8.77□□□□□ -1.01
SNX1-212ENST00000560861 TMEM37Q8WXS4 190 aa8.77□□□□□ -1.01
SNX1-212ENST00000560861 RAB24Q969Q5 203 aa8.77□□□□□ -1.01
SNX1-212ENST00000560861 HRH4Q9H3N8 390 aa8.77□□□□□ -1.01
SNX1-212ENST00000560861 TRAV30A0A087WSZ9 112 aa8.76□□□□□ -1.01
SNX1-212ENST00000560861 RAB19A4D1S5 217 aa8.76□□□□□ -1.01
SNX1-212ENST00000560861 ATP6V1G1O75348 118 aa8.76□□□□□ -1.01
SNX1-212ENST00000560861 EIF3GO75821 320 aaKnown RBP eCLIP8.76□□□□□ -1.01
SNX1-212ENST00000560861 TOMM40O96008 361 aa8.76□□□□□ -1.01
SNX1-212ENST00000560861 TRGV3P03979 118 aa8.76□□□□□ -1.01
SNX1-212ENST00000560861 CTSGP08311 255 aa8.76□□□□□ -1.01
SNX1-212ENST00000560861 PSMB8P28062 276 aa8.76□□□□□ -1.01
SNX1-212ENST00000560861 CDC34P49427 236 aaPredicted RBP8.76□□□□□ -1.01
SNX1-212ENST00000560861 PMS2P11Q13670 270 aa8.76□□□□□ -1.01
SNX1-212ENST00000560861 KIAA0141Q14154 515 aaPredicted RBP8.76□□□□□ -1.01
SNX1-212ENST00000560861 Q6ZSV7 163 aa8.76□□□□□ -1.01
SNX1-212ENST00000560861 RNF152Q8N8N0 203 aa8.76□□□□□ -1.01
SNX1-212ENST00000560861 WIPF2Q8TF74 440 aaPredicted RBP8.76□□□□□ -1.01
SNX1-212ENST00000560861 MARC2Q969Z3 335 aa8.76□□□□□ -1.01
SNX1-212ENST00000560861 MS4A10Q96PG2 267 aa8.76□□□□□ -1.01
SNX1-212ENST00000560861 ACTR3CQ9C0K3 210 aaPredicted RBP8.76□□□□□ -1.01
SNX1-212ENST00000560861 KLK15Q9H2R5 256 aa8.76□□□□□ -1.01
SNX1-212ENST00000560861 SLC25A22Q9H936 323 aa8.76□□□□□ -1.01
SNX1-212ENST00000560861 PFDN2Q9UHV9 154 aa8.76□□□□□ -1.01
SNX1-212ENST00000560861 WI2-2373I1.2A0A1W2PRP0 233 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms