RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	RGS12	O14924	1447 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	SLC22A1	O15245	554 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	HMGB3	O15347	200 aa	Known RBP	0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	CST7	O76096	145 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	DPM2	O94777	84 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	PCF11	O94913	1555 aa	Known RBP	0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	SOGA1	O94964	1423 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	ZNF682	O95780	498 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	IGKV1D-12	P01611	117 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	IFNA4	P05014	189 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	IGKV5-2	P06315	115 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	TFPT	P0C1Z6	253 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	METTL15P1	P0C7V9	234 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	UBB	P0CG47	229 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	IGHV3-30-3	P0DP02	117 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	HIST1H2BO	P23527	126 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	NPPC	P23582	126 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	CD24	P25063	80 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	PSMB8	P28062	276 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	HIST1H2BB	P33778	126 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	SRP14	P37108	136 aa	Known RBP	0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	GUCA1A	P43080	201 aa	Predicted RBP	0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	RAB5C	P51148	216 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	CTBP2	P56545	445 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	HIST1H2BD	P58876	126 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	CKS1B	P61024	79 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	FGF12	P61328	243 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	HIST1H2BC	P62807	126 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	HERVK_113	P63121	156 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	EIF5A	P63241	154 aa	Known RBP	0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	HBA1	P69905	142 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	CCL20	P78556	96 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	DEFA6	Q01524	100 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	EMX2	Q04743	252 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	EIF3I	Q13347	325 aa	Known RBP	0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	KCNJ8	Q15842	424 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	HIST2H2BE	Q16778	126 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	RTL8B	Q17RB0	113 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	SPANXN3	Q5MJ09	141 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	SPATA31B1P	Q5VZV4	182 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	AMTN	Q6UX39	209 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	ATP5L2	Q7Z4Y8	100 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	PDZD9	Q8IXQ8	264 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	TCTE3	Q8IZS6	198 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	OR8I2	Q8N0Y5	310 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	ATOH7	Q8N100	152 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	TMEM86A	Q8N2M4	240 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	SMIM20	Q8N5G0	67 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	TMEM229B	Q8NBD8	167 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	OR8B12	Q8NGG6	310 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	OR5D16	Q8NGK9	328 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	OR2T27	Q8NH04	317 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	OR5J2	Q8NH18	312 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	HIST1H2BH	Q93079	126 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	PPP3R2	Q96LZ3	170 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	ERBIN	Q96RT1	1412 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	HIST1H2BN	Q99877	126 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	HIST1H2BM	Q99879	126 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	VPS25	Q9BRG1	176 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532		Q9BRP9	147 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	LINC00467	Q9BRT7	94 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	OR2J1	Q9GZK6	312 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	UQCC1	Q9NVA1	299 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	FBXL12	Q9NXK8	326 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	MED11	Q9P086	117 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	HSPB8	Q9UJY1	196 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	TRAPPC2L	Q9UL33	140 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	ANAPC10	Q9UM13	185 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	ASB4	Q9Y574	426 aa		0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	DICER1	Q9UPY3	1922 aa	Known RBP	0.68	□□□□□ -2.3
SLTM-223	ENST00000560532	A2M	P01023	1474 aa		0.67	□□□□□ -2.3
SLTM-223	ENST00000560532	NCAPD3	P42695	1498 aa		0.67	□□□□□ -2.3
SLTM-223	ENST00000560532	DOCK3	Q8IZD9	2030 aa		0.67	□□□□□ -2.3
SLTM-223	ENST00000560532	CEP152	O94986	1710 aa		0.67	□□□□□ -2.3
SLTM-223	ENST00000560532	KDM5C	P41229	1560 aa		0.67	□□□□□ -2.3
SLTM-223	ENST00000560532	SMARCA2	P51531	1590 aa		0.67	□□□□□ -2.3
SLTM-223	ENST00000560532	OVOS2	A0A0G2JMS6	1433 aa		0.67	□□□□□ -2.3
SLTM-223	ENST00000560532	OVOS2	A0A0J9YW53	1432 aa		0.67	□□□□□ -2.3
SLTM-223	ENST00000560532	KDM6A	O15550	1401 aa	Predicted RBP	0.67	□□□□□ -2.3
SLTM-223	ENST00000560532	OVOS2	Q6IE36	1432 aa		0.67	□□□□□ -2.3
SLTM-223	ENST00000560532	VPS8	Q8N3P4	1428 aa		0.67	□□□□□ -2.3
SLTM-223	ENST00000560532	CNTLN	Q9NXG0	1405 aa		0.67	□□□□□ -2.3
SLTM-223	ENST00000560532		A0A087WX48	190 aa		0.67	□□□□□ -2.3
SLTM-223	ENST00000560532		A0A0D9SG52	128 aa		0.67	□□□□□ -2.3
SLTM-223	ENST00000560532	TRBV7-6	A0A0J9YX20	115 aa		0.67	□□□□□ -2.3
SLTM-223	ENST00000560532	PNMA8C	A0A1B0GUJ8	204 aa		0.67	□□□□□ -2.3
SLTM-223	ENST00000560532	DPRX	A6NFQ7	191 aa		0.67	□□□□□ -2.3
SLTM-223	ENST00000560532	FABP5P3	A8MUU1	101 aa		0.67	□□□□□ -2.3
SLTM-223	ENST00000560532	EVPLL	A8MZ36	301 aa		0.67	□□□□□ -2.3
SLTM-223	ENST00000560532		C9JCJ5	164 aa		0.67	□□□□□ -2.3
SLTM-223	ENST00000560532	INMT-MINDY4	F8WBC2	141 aa		0.67	□□□□□ -2.3
SLTM-223	ENST00000560532	ARPC5	O15511	151 aa		0.67	□□□□□ -2.3
SLTM-223	ENST00000560532	CYB5B	O43169	146 aa		0.67	□□□□□ -2.3
SLTM-223	ENST00000560532	NDUFB3	O43676	98 aa		0.67	□□□□□ -2.3
SLTM-223	ENST00000560532	OR2T1	O43869	369 aa		0.67	□□□□□ -2.3
SLTM-223	ENST00000560532	CREBL2	O60519	120 aa	Predicted RBP	0.67	□□□□□ -2.3
SLTM-223	ENST00000560532	OR2H2	O95918	312 aa		0.67	□□□□□ -2.3
SLTM-223	ENST00000560532	NPY	P01303	97 aa		0.67	□□□□□ -2.3
SLTM-223	ENST00000560532	PRM2	P04554	102 aa		0.67	□□□□□ -2.3

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms