RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 IGHV4-31P0DP07 118 aa8.57□□□□□ -1.04
SNRPA1-211ENST00000560433 TMEM249Q2WGJ8 235 aa8.57□□□□□ -1.04
SNRPA1-211ENST00000560433 SOHLH1Q5JUK2 328 aa8.57□□□□□ -1.04
SNRPA1-211ENST00000560433 SLC35E3Q7Z769 313 aa8.57□□□□□ -1.04
SNRPA1-211ENST00000560433 CBLN2Q8IUK8 224 aa8.57□□□□□ -1.04
SNRPA1-211ENST00000560433 MRPL41Q8IXM3 137 aaKnown RBP8.57□□□□□ -1.04
SNRPA1-211ENST00000560433 SVBPQ8N300 66 aa8.57□□□□□ -1.04
SNRPA1-211ENST00000560433 CARHSP1Q9Y2V2 147 aaKnown RBP8.57□□□□□ -1.04
SNRPA1-211ENST00000560433 TCRBV4S1A1TA0A5B7 111 aa8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 SEC14L6B5MCN3 397 aa8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 FNDC10F2Z333 226 aa8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 K7EIM0 57 aa8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 OR2J3O76001 311 aa8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 ATP5G3P48201 142 aa8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 CD81P60033 236 aa8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 CST9LP1Q5W188 147 aa8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 SPNS3Q6ZMD2 512 aa8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 RBM14Q96PK6 669 aaKnown RBP8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 FANCD2OSQ96PS1 177 aa8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 ZNF355PQ9NSJ1 428 aa8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 BEX4Q9NWD9 120 aaPredicted RBP8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 C1RLQ9NZP8 487 aa8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 NOTCH2Q04721 2471 aa8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 TRAV20A0A0B4J274 112 aa8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 M0R036 132 aa8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 AMY1AP04745 511 aa8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 CRYGCP07315 174 aa8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 OR5G3P0C626 314 aa8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 STAG3L2P0CL84 134 aa8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 STAG3L3P0CL85 134 aa8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 ZNF674Q2M3X9 581 aa8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 UNQ5815/PRO19632Q6UWF5 114 aa8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 PATE2Q6UY27 113 aa8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 Q6ZS46 218 aa8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 C5orf56Q8N8D9 126 aa8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 OR51G1Q8NGK1 321 aa8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 OR1B1Q8NGR6 318 aa8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 OR4F5Q8NH21 305 aa8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 OR4X1Q8NH49 305 aa8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 MS4A10Q96PG2 267 aa8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 OR4F4Q96R69 305 aa8.56□□□□□ -1.04
SNRPA1-211ENST00000560433 IGHV3-35A0A0C4DH35 117 aa8.55□□□□□ -1.04
SNRPA1-211ENST00000560433 RHOBP62745 196 aa8.55□□□□□ -1.04
SNRPA1-211ENST00000560433 TIGITQ495A1 244 aa8.55□□□□□ -1.04
SNRPA1-211ENST00000560433 KHDC3LQ587J8 217 aa8.55□□□□□ -1.04
SNRPA1-211ENST00000560433 LEMD1Q68G75 181 aa8.55□□□□□ -1.04
SNRPA1-211ENST00000560433 PVRIGQ6DKI7 326 aa8.55□□□□□ -1.04
SNRPA1-211ENST00000560433 IL17RELQ6ZVW7 336 aa8.55□□□□□ -1.04
SNRPA1-211ENST00000560433 OR7C2O60412 319 aa8.55□□□□□ -1.04
SNRPA1-211ENST00000560433 NDUFB8O95169 186 aa8.55□□□□□ -1.04
SNRPA1-211ENST00000560433 HLA-DRB1P01911 266 aa8.55□□□□□ -1.04
SNRPA1-211ENST00000560433 BLCAPP62952 87 aa8.55□□□□□ -1.04
SNRPA1-211ENST00000560433 MEF2BQ02080 365 aaPredicted RBP8.55□□□□□ -1.04
SNRPA1-211ENST00000560433 LOXL1Q08397 574 aaPredicted RBP8.55□□□□□ -1.04
SNRPA1-211ENST00000560433 DEFB112Q30KQ8 113 aa8.55□□□□□ -1.04
SNRPA1-211ENST00000560433 ETFRF1Q6IPR1 90 aa8.55□□□□□ -1.04
SNRPA1-211ENST00000560433 TMEM116Q8NCL8 245 aa8.55□□□□□ -1.04
SNRPA1-211ENST00000560433 CLRN3Q8NCR9 226 aa8.55□□□□□ -1.04
SNRPA1-211ENST00000560433 ZNF503Q96F45 646 aa8.55□□□□□ -1.04
SNRPA1-211ENST00000560433 MEGF9Q9H1U4 602 aa8.55□□□□□ -1.04
SNRPA1-211ENST00000560433 VAX2Q9UIW0 290 aa8.55□□□□□ -1.04
SNRPA1-211ENST00000560433 IGHV3OR16-8A0A075B7F1 116 aa8.54□□□□□ -1.04
SNRPA1-211ENST00000560433 PSMB3P49720 205 aa8.54□□□□□ -1.04
SNRPA1-211ENST00000560433 AWAT1Q58HT5 328 aa8.54□□□□□ -1.04
SNRPA1-211ENST00000560433 THAP8Q8NA92 274 aa8.54□□□□□ -1.04
SNRPA1-211ENST00000560433 RPUSD4Q96CM3 377 aaKnown RBP8.54□□□□□ -1.04
SNRPA1-211ENST00000560433 KCNIP2Q9NS61 270 aa8.54□□□□□ -1.04
SNRPA1-211ENST00000560433 FUT9Q9Y231 359 aa8.54□□□□□ -1.04
SNRPA1-211ENST00000560433 PSMB11A5LHX3 300 aa8.54□□□□□ -1.04
SNRPA1-211ENST00000560433 C11orf94C9JXX5 98 aa8.54□□□□□ -1.04
SNRPA1-211ENST00000560433 DNASE2O00115 360 aaPredicted RBP8.54□□□□□ -1.04
SNRPA1-211ENST00000560433 CORTO00230 105 aa8.54□□□□□ -1.04
SNRPA1-211ENST00000560433 COX7A2P2O60397 106 aa8.54□□□□□ -1.04
SNRPA1-211ENST00000560433 SNAPINO95295 136 aa8.54□□□□□ -1.04
SNRPA1-211ENST00000560433 IGLC1P0CG04 106 aa8.54□□□□□ -1.04
SNRPA1-211ENST00000560433 PYYP10082 97 aa8.54□□□□□ -1.04
SNRPA1-211ENST00000560433 PRB4P10163 310 aaPredicted RBP8.54□□□□□ -1.04
SNRPA1-211ENST00000560433 PSG1P11464 419 aa8.54□□□□□ -1.04
SNRPA1-211ENST00000560433 FAM90A2PQ658T7 463 aa8.54□□□□□ -1.04
SNRPA1-211ENST00000560433 RBMS3Q6XE24 437 aaKnown RBP8.54□□□□□ -1.04
SNRPA1-211ENST00000560433 TTC9CQ8N5M4 171 aa8.54□□□□□ -1.04
SNRPA1-211ENST00000560433 NOL4LQ96MY1 436 aaPredicted RBP8.54□□□□□ -1.04
SNRPA1-211ENST00000560433 DNAJC4Q9NNZ3 241 aa8.54□□□□□ -1.04
SNRPA1-211ENST00000560433 RPS10P5Q9NQ39 176 aa8.54□□□□□ -1.04
SNRPA1-211ENST00000560433 YTHDF2Q9Y5A9 579 aaKnown RBP8.54□□□□□ -1.04
SNRPA1-211ENST00000560433 IGLV11-55A0A075B6I3 123 aa8.53□□□□□ -1.04
SNRPA1-211ENST00000560433 H3BQ15 152 aa8.53□□□□□ -1.04
SNRPA1-211ENST00000560433 TSPAN4O14817 238 aa8.53□□□□□ -1.04
SNRPA1-211ENST00000560433 CXorf1O96002 111 aa8.53□□□□□ -1.04
SNRPA1-211ENST00000560433 IFNA1P01562 189 aa8.53□□□□□ -1.04
SNRPA1-211ENST00000560433 IGHV4-59P01825 116 aa8.53□□□□□ -1.04
SNRPA1-211ENST00000560433 GCHFRP30047 84 aa8.53□□□□□ -1.04
SNRPA1-211ENST00000560433 LYZP61626 148 aa8.53□□□□□ -1.04
SNRPA1-211ENST00000560433 LINC00305Q7Z4B0 112 aa8.53□□□□□ -1.04
SNRPA1-211ENST00000560433 SGMS2Q8NHU3 365 aa8.53□□□□□ -1.04
SNRPA1-211ENST00000560433 DUX5Q96PT3 197 aa8.53□□□□□ -1.04
SNRPA1-211ENST00000560433 DERL1Q9BUN8 251 aa8.53□□□□□ -1.04
SNRPA1-211ENST00000560433 MOB4Q9Y3A3 225 aa8.53□□□□□ -1.04
SNRPA1-211ENST00000560433 OR2T8A6NH00 312 aa8.53□□□□□ -1.04
SNRPA1-211ENST00000560433 NPIPB5A8MRT5 1133 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms