RNA–Protein interactions for RNA: ENST00000559737.5

USP3-AS1-203, USP3 antisense RNA 1, humanhuman

TSL 1 (best)

Gene USP3-AS1, Length 1,434 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-AS1-203ENST00000559737 NUP62P37198 522 aaPredicted RBP14.34□□□□□ -0.11
USP3-AS1-203ENST00000559737 AKR1C1Q04828 323 aa14.34□□□□□ -0.11
USP3-AS1-203ENST00000559737 FAM209BQ5JX69 171 aa14.34□□□□□ -0.11
USP3-AS1-203ENST00000559737 OR1S2Q8NGQ3 325 aa14.34□□□□□ -0.11
USP3-AS1-203ENST00000559737 GGACTQ9BVM4 153 aa14.34□□□□□ -0.11
USP3-AS1-203ENST00000559737 GAR1Q9NY12 217 aaKnown RBP14.34□□□□□ -0.11
USP3-AS1-203ENST00000559737 IGKV1D-37A0A075B6S9 117 aa14.33□□□□□ -0.11
USP3-AS1-203ENST00000559737 IGKV1OR2-108A0A075B7D4 117 aa14.33□□□□□ -0.11
USP3-AS1-203ENST00000559737 GGCTO75223 188 aaKnown RBP14.33□□□□□ -0.11
USP3-AS1-203ENST00000559737 IGKV1-17P01599 117 aa14.33□□□□□ -0.11
USP3-AS1-203ENST00000559737 OR10J1P30954 320 aa14.33□□□□□ -0.11
USP3-AS1-203ENST00000559737 AP2S1P53680 142 aaPredicted RBP14.33□□□□□ -0.11
USP3-AS1-203ENST00000559737 SLURP1P55000 103 aa14.33□□□□□ -0.11
USP3-AS1-203ENST00000559737 FHL3Q13643 280 aa14.33□□□□□ -0.11
USP3-AS1-203ENST00000559737 CLINT1Q14677 625 aa14.33□□□□□ -0.11
USP3-AS1-203ENST00000559737 TIGITQ495A1 244 aa14.33□□□□□ -0.11
USP3-AS1-203ENST00000559737 SPSB3Q6PJ21 355 aa14.33□□□□□ -0.11
USP3-AS1-203ENST00000559737 INO80EQ8NBZ0 244 aaPredicted RBP14.33□□□□□ -0.11
USP3-AS1-203ENST00000559737 ZNF414Q96IQ9 312 aa14.33□□□□□ -0.11
USP3-AS1-203ENST00000559737 SMIM3Q9BZL3 60 aa14.33□□□□□ -0.11
USP3-AS1-203ENST00000559737 FNDC10F2Z333 226 aa14.32□□□□□ -0.12
USP3-AS1-203ENST00000559737 NUPL2O15504 423 aaKnown RBP14.32□□□□□ -0.12
USP3-AS1-203ENST00000559737 TSPAN15O95858 294 aa14.32□□□□□ -0.12
USP3-AS1-203ENST00000559737 C1QBP02746 253 aa14.32□□□□□ -0.12
USP3-AS1-203ENST00000559737 HOXD3P31249 432 aaPredicted RBP14.32□□□□□ -0.12
USP3-AS1-203ENST00000559737 MYCNOSP40205 109 aa14.32□□□□□ -0.12
USP3-AS1-203ENST00000559737 ATP6V1FQ16864 119 aa14.32□□□□□ -0.12
USP3-AS1-203ENST00000559737 RPEL1Q2QD12 228 aa14.32□□□□□ -0.12
USP3-AS1-203ENST00000559737 TREML4Q6UXN2 200 aa14.32□□□□□ -0.12
USP3-AS1-203ENST00000559737 TMEM144Q7Z5S9 345 aa14.32□□□□□ -0.12
USP3-AS1-203ENST00000559737 THAP8Q8NA92 274 aa14.32□□□□□ -0.12
USP3-AS1-203ENST00000559737 OR4F17Q8NGA8 305 aa14.32□□□□□ -0.12
USP3-AS1-203ENST00000559737 OR4F4Q96R69 305 aa14.32□□□□□ -0.12
USP3-AS1-203ENST00000559737 TMEM147Q9BVK8 224 aa14.32□□□□□ -0.12
USP3-AS1-203ENST00000559737 NPVFQ9HCQ7 196 aa14.32□□□□□ -0.12
USP3-AS1-203ENST00000559737 UQCC1Q9NVA1 299 aa14.32□□□□□ -0.12
USP3-AS1-203ENST00000559737 VWFP04275 2813 aa14.32□□□□□ -0.12
USP3-AS1-203ENST00000559737 TRAV30A0A087WSZ9 112 aa14.32□□□□□ -0.12
USP3-AS1-203ENST00000559737 ZFP92A6NM28 416 aa14.32□□□□□ -0.12
USP3-AS1-203ENST00000559737 HMSDA8MTL9 139 aa14.32□□□□□ -0.12
USP3-AS1-203ENST00000559737 VWC2Q2TAL6 325 aa14.32□□□□□ -0.12
USP3-AS1-203ENST00000559737 MFFQ9GZY8 342 aa14.32□□□□□ -0.12
USP3-AS1-203ENST00000559737 WFDC1Q9HC57 220 aa14.32□□□□□ -0.12
USP3-AS1-203ENST00000559737 FBXL17Q9UF56 701 aa14.32□□□□□ -0.12
USP3-AS1-203ENST00000559737 TRRAPQ9Y4A5 3859 aa14.31□□□□□ -0.12
USP3-AS1-203ENST00000559737 UBE2L5PA0A1B0GUS4 154 aa14.31□□□□□ -0.12
USP3-AS1-203ENST00000559737 M0QZ24 198 aa14.31□□□□□ -0.12
USP3-AS1-203ENST00000559737 PF4P02776 101 aa14.31□□□□□ -0.12
USP3-AS1-203ENST00000559737 ZP3P21754 424 aa14.31□□□□□ -0.12
USP3-AS1-203ENST00000559737 SPATA3Q8NHX4 192 aa14.31□□□□□ -0.12
USP3-AS1-203ENST00000559737 ZNF90Q03938 601 aa14.3□□□□□ -0.12
USP3-AS1-203ENST00000559737 DLX4Q92988 240 aaPredicted RBP14.3□□□□□ -0.12
USP3-AS1-203ENST00000559737 TRGV9Q99603 122 aa14.3□□□□□ -0.12
USP3-AS1-203ENST00000559737 ATP5SQ99766 215 aa14.3□□□□□ -0.12
USP3-AS1-203ENST00000559737 WDR83OSQ9Y284 106 aa14.3□□□□□ -0.12
USP3-AS1-203ENST00000559737 LSM4Q9Y4Z0 139 aaKnown RBP14.3□□□□□ -0.12
USP3-AS1-203ENST00000559737 CXCL2P19875 107 aa14.29□□□□□ -0.12
USP3-AS1-203ENST00000559737 EIF2B2P49770 351 aaKnown RBP14.29□□□□□ -0.12
USP3-AS1-203ENST00000559737 SYNJ2BPP57105 145 aa14.29□□□□□ -0.12
USP3-AS1-203ENST00000559737 KLF5Q13887 457 aaPredicted RBP14.29□□□□□ -0.12
USP3-AS1-203ENST00000559737 TEPPQ6URK8 271 aa14.29□□□□□ -0.12
USP3-AS1-203ENST00000559737 GPHB5Q86YW7 130 aa14.29□□□□□ -0.12
USP3-AS1-203ENST00000559737 IGHV3OR16-8A0A075B7F1 116 aa14.28□□□□□ -0.12
USP3-AS1-203ENST00000559737 PFDN1O60925 122 aa14.28□□□□□ -0.12
USP3-AS1-203ENST00000559737 SCGB2A1O75556 95 aa14.28□□□□□ -0.12
USP3-AS1-203ENST00000559737 YPEL3P61236 119 aaPredicted RBP14.28□□□□□ -0.12
USP3-AS1-203ENST00000559737 RELQ04864 619 aaPredicted RBP14.28□□□□□ -0.12
USP3-AS1-203ENST00000559737 ZFP69Q49AA0 526 aa14.28□□□□□ -0.12
USP3-AS1-203ENST00000559737 UNQ9165/PRO28630Q6UXU0 137 aa14.28□□□□□ -0.12
USP3-AS1-203ENST00000559737 ZNF600Q6ZNG1 722 aa14.28□□□□□ -0.12
USP3-AS1-203ENST00000559737 TMEM182Q6ZP80 229 aaPredicted RBP14.28□□□□□ -0.12
USP3-AS1-203ENST00000559737 LINC00482Q8N8I6 264 aa14.28□□□□□ -0.12
USP3-AS1-203ENST00000559737 RCC1LQ96I51 464 aaKnown RBP14.28□□□□□ -0.12
USP3-AS1-203ENST00000559737 PUS1Q9Y606 427 aaKnown RBP eCLIP14.28□□□□□ -0.12
USP3-AS1-203ENST00000559737 NDUFA4O00483 81 aa14.27□□□□□ -0.12
USP3-AS1-203ENST00000559737 DFFBO76075 338 aa14.27□□□□□ -0.12
USP3-AS1-203ENST00000559737 PSG1P11464 419 aa14.27□□□□□ -0.12
USP3-AS1-203ENST00000559737 FGF7P21781 194 aa14.27□□□□□ -0.12
USP3-AS1-203ENST00000559737 GATA2P23769 480 aaPredicted RBP14.27□□□□□ -0.12
USP3-AS1-203ENST00000559737 OR2F1Q13607 317 aa14.27□□□□□ -0.12
USP3-AS1-203ENST00000559737 BTNL8Q6UX41 500 aa14.27□□□□□ -0.12
USP3-AS1-203ENST00000559737 TOMM20LQ6UXN7 152 aa14.27□□□□□ -0.12
USP3-AS1-203ENST00000559737 HYLS1Q96M11 299 aa14.27□□□□□ -0.12
USP3-AS1-203ENST00000559737 MGST2Q99735 147 aa14.27□□□□□ -0.12
USP3-AS1-203ENST00000559737 ZNF320A2RRD8 509 aa14.26□□□□□ -0.13
USP3-AS1-203ENST00000559737 AGPAT2O15120 278 aa14.26□□□□□ -0.13
USP3-AS1-203ENST00000559737 YIF1AO95070 293 aa14.26□□□□□ -0.13
USP3-AS1-203ENST00000559737 TOMM40O96008 361 aa14.26□□□□□ -0.13
USP3-AS1-203ENST00000559737 RD3LP0DJH9 198 aa14.26□□□□□ -0.13
USP3-AS1-203ENST00000559737 ZNF345Q14585 488 aa14.26□□□□□ -0.13
USP3-AS1-203ENST00000559737 FAM106AQ4KMX7 169 aa14.26□□□□□ -0.13
USP3-AS1-203ENST00000559737 CYP2G1PQ6ZSU1 146 aa14.26□□□□□ -0.13
USP3-AS1-203ENST00000559737 C1QL4Q86Z23 238 aa14.26□□□□□ -0.13
USP3-AS1-203ENST00000559737 KCNRGQ8N5I3 272 aa14.26□□□□□ -0.13
USP3-AS1-203ENST00000559737 LGALSLQ3ZCW2 172 aaPredicted RBP14.25□□□□□ -0.13
USP3-AS1-203ENST00000559737 Q8WTZ3 238 aa14.25□□□□□ -0.13
USP3-AS1-203ENST00000559737 TMEM190Q8WZ59 177 aa14.25□□□□□ -0.13
USP3-AS1-203ENST00000559737 WDR61Q9GZS3 305 aaKnown RBP14.25□□□□□ -0.13
USP3-AS1-203ENST00000559737 ZFAND3Q9H8U3 227 aa14.25□□□□□ -0.13
USP3-AS1-203ENST00000559737 OVOL1O14753 267 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms