RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 NPPCP23582 126 aa6.11□□□□□ -1.43
SNX1-207ENST00000559401 OR10J1P30954 320 aa6.11□□□□□ -1.43
SNX1-207ENST00000559401 ODF3L2Q3SX64 289 aa6.11□□□□□ -1.43
SNX1-207ENST00000559401 PVRIGQ6DKI7 326 aa6.11□□□□□ -1.43
SNX1-207ENST00000559401 ZFAND6Q6FIF0 208 aa6.11□□□□□ -1.43
SNX1-207ENST00000559401 PRSS54Q6PEW0 395 aa6.11□□□□□ -1.43
SNX1-207ENST00000559401 LINC00322Q6ZN03 302 aaPredicted RBP6.11□□□□□ -1.43
SNX1-207ENST00000559401 Q8WTZ3 238 aa6.11□□□□□ -1.43
SNX1-207ENST00000559401 ZNF414Q96IQ9 312 aa6.11□□□□□ -1.43
SNX1-207ENST00000559401 RABAC1Q9UI14 185 aa6.11□□□□□ -1.43
SNX1-207ENST00000559401 U3KQ87 197 aa6.11□□□□□ -1.43
SNX1-207ENST00000559401 DNAH9Q9NYC9 4486 aa6.11□□□□□ -1.43
SNX1-207ENST00000559401 A0A1W2PS18 150 aa6.1□□□□□ -1.43
SNX1-207ENST00000559401 MED6O75586 246 aa6.1□□□□□ -1.43
SNX1-207ENST00000559401 DFFBO76075 338 aa6.1□□□□□ -1.43
SNX1-207ENST00000559401 CD5P06127 495 aa6.1□□□□□ -1.43
SNX1-207ENST00000559401 IGLC1P0CG04 106 aa6.1□□□□□ -1.43
SNX1-207ENST00000559401 RPL35AP18077 110 aaKnown RBP6.1□□□□□ -1.43
SNX1-207ENST00000559401 APOC4P55056 127 aa6.1□□□□□ -1.43
SNX1-207ENST00000559401 UBE2MP61081 183 aaKnown RBP6.1□□□□□ -1.43
SNX1-207ENST00000559401 RAB11AP62491 216 aa6.1□□□□□ -1.43
SNX1-207ENST00000559401 C4orf46Q504U0 113 aa6.1□□□□□ -1.43
SNX1-207ENST00000559401 APRG1Q8IVJ8 170 aa6.1□□□□□ -1.43
SNX1-207ENST00000559401 LRTM2Q8N967 370 aa6.1□□□□□ -1.43
SNX1-207ENST00000559401 STXBP6Q8NFX7 210 aa6.1□□□□□ -1.43
SNX1-207ENST00000559401 OR1S2Q8NGQ3 325 aa6.1□□□□□ -1.43
SNX1-207ENST00000559401 TMEM170AQ8WVE7 144 aa6.1□□□□□ -1.43
SNX1-207ENST00000559401 NPIPB3Q92617 1050 aa6.1□□□□□ -1.43
SNX1-207ENST00000559401 GRAMD2BQ96HH9 432 aa6.1□□□□□ -1.43
SNX1-207ENST00000559401 SLC35E1Q96K37 410 aa6.1□□□□□ -1.43
SNX1-207ENST00000559401 C7orf50Q9BRJ6 194 aaKnown RBP6.1□□□□□ -1.43
SNX1-207ENST00000559401 MAGT1Q9H0U3 335 aa6.1□□□□□ -1.43
SNX1-207ENST00000559401 FLVCR2Q9UPI3 526 aa6.1□□□□□ -1.43
SNX1-207ENST00000559401 TMED3Q9Y3Q3 217 aa6.1□□□□□ -1.43
SNX1-207ENST00000559401 C9orf170A2RU37 121 aa6.09□□□□□ -1.43
SNX1-207ENST00000559401 ZFP92A6NM28 416 aa6.09□□□□□ -1.43
SNX1-207ENST00000559401 WRBO00258 174 aa6.09□□□□□ -1.43
SNX1-207ENST00000559401 ADAP1O75689 374 aa6.09□□□□□ -1.43
SNX1-207ENST00000559401 IFNA21P01568 189 aa6.09□□□□□ -1.43
SNX1-207ENST00000559401 IGKV1-17P01599 117 aa6.09□□□□□ -1.43
SNX1-207ENST00000559401 IL4P05112 153 aa6.09□□□□□ -1.43
SNX1-207ENST00000559401 OR4E1P0C645 316 aa6.09□□□□□ -1.43
SNX1-207ENST00000559401 ANXA7P20073 488 aaKnown RBP6.09□□□□□ -1.43
SNX1-207ENST00000559401 P2RY1P47900 373 aa6.09□□□□□ -1.43
SNX1-207ENST00000559401 CMC4P56277 68 aaPredicted RBP6.09□□□□□ -1.43
SNX1-207ENST00000559401 DEFB135Q30KP9 77 aa6.09□□□□□ -1.43
SNX1-207ENST00000559401 GGNBP1Q5YKI7 109 aa6.09□□□□□ -1.43
SNX1-207ENST00000559401 LYG2Q86SG7 212 aa6.09□□□□□ -1.43
SNX1-207ENST00000559401 COQ8AQ8NI60 647 aa6.09□□□□□ -1.43
SNX1-207ENST00000559401 CIB3Q96Q77 187 aaPredicted RBP6.09□□□□□ -1.43
SNX1-207ENST00000559401 SDHCQ99643 169 aaPredicted RBP6.09□□□□□ -1.43
SNX1-207ENST00000559401 PBDC1Q9BVG4 233 aa6.09□□□□□ -1.43
SNX1-207ENST00000559401 MS4A6AQ9H2W1 248 aa6.09□□□□□ -1.43
SNX1-207ENST00000559401 VSIRQ9H7M9 311 aa6.09□□□□□ -1.43
SNX1-207ENST00000559401 MAP6D1Q9H9H5 199 aa6.09□□□□□ -1.43
SNX1-207ENST00000559401 EDA2RQ9HAV5 297 aa6.09□□□□□ -1.43
SNX1-207ENST00000559401 FAM90A26D6RGX4 464 aa6.08□□□□□ -1.44
SNX1-207ENST00000559401 H3BP45 60 aa6.08□□□□□ -1.44
SNX1-207ENST00000559401 LYRM1O43325 122 aa6.08□□□□□ -1.44
SNX1-207ENST00000559401 SYNGR2O43760 224 aa6.08□□□□□ -1.44
SNX1-207ENST00000559401 PITX3O75364 302 aa6.08□□□□□ -1.44
SNX1-207ENST00000559401 SCGB1D2O95969 90 aa6.08□□□□□ -1.44
SNX1-207ENST00000559401 HNRNPCP07910 306 aaKnown RBP eCLIP6.08□□□□□ -1.44
SNX1-207ENST00000559401 RD3LP0DJH9 198 aa6.08□□□□□ -1.44
SNX1-207ENST00000559401 SLC25A6P12236 298 aa6.08□□□□□ -1.44
SNX1-207ENST00000559401 EIF2B2P49770 351 aaKnown RBP6.08□□□□□ -1.44
SNX1-207ENST00000559401 ATP5IP56385 69 aaPredicted RBP6.08□□□□□ -1.44
SNX1-207ENST00000559401 YPEL3P61236 119 aaPredicted RBP6.08□□□□□ -1.44
SNX1-207ENST00000559401 RPP30P78346 268 aaKnown RBP6.08□□□□□ -1.44
SNX1-207ENST00000559401 DHRS2Q13268 280 aa6.08□□□□□ -1.44
SNX1-207ENST00000559401 ZNF124Q15973 351 aa6.08□□□□□ -1.44
SNX1-207ENST00000559401 CASC10Q5T4H9 136 aa6.08□□□□□ -1.44
SNX1-207ENST00000559401 FAM90A2PQ658T7 463 aa6.08□□□□□ -1.44
SNX1-207ENST00000559401 LILRB2Q8N423 598 aa6.08□□□□□ -1.44
SNX1-207ENST00000559401 STPG3Q8N7X2 389 aa6.08□□□□□ -1.44
SNX1-207ENST00000559401 BATF3Q9NR55 127 aa6.08□□□□□ -1.44
SNX1-207ENST00000559401 HELTA6NFD8 242 aa6.07□□□□□ -1.44
SNX1-207ENST00000559401 TOMM40O96008 361 aa6.07□□□□□ -1.44
SNX1-207ENST00000559401 FABP1P07148 127 aa6.07□□□□□ -1.44
SNX1-207ENST00000559401 ZNF688P0C7X2 276 aa6.07□□□□□ -1.44
SNX1-207ENST00000559401 PSG1P11464 419 aa6.07□□□□□ -1.44
SNX1-207ENST00000559401 CRYBB3P26998 211 aa6.07□□□□□ -1.44
SNX1-207ENST00000559401 BTCP35070 178 aa6.07□□□□□ -1.44
SNX1-207ENST00000559401 GPX4P36969 197 aaPredicted RBP6.07□□□□□ -1.44
SNX1-207ENST00000559401 DEFB131AP59861 70 aa6.07□□□□□ -1.44
SNX1-207ENST00000559401 LYZP61626 148 aa6.07□□□□□ -1.44
SNX1-207ENST00000559401 OR2F1Q13607 317 aa6.07□□□□□ -1.44
SNX1-207ENST00000559401 USF2Q15853 346 aaPredicted RBP6.07□□□□□ -1.44
SNX1-207ENST00000559401 SPANXN5Q5MJ07 72 aa6.07□□□□□ -1.44
SNX1-207ENST00000559401 LEMD1Q68G75 181 aa6.07□□□□□ -1.44
SNX1-207ENST00000559401 OR51G1Q8NGK1 321 aa6.07□□□□□ -1.44
SNX1-207ENST00000559401 PPP1R14BQ96C90 147 aa6.07□□□□□ -1.44
SNX1-207ENST00000559401 RNF125Q96EQ8 232 aa6.07□□□□□ -1.44
SNX1-207ENST00000559401 C20orf85Q9H1P6 137 aa6.07□□□□□ -1.44
SNX1-207ENST00000559401 TRAV6A0A075B6T7 132 aa6.06□□□□□ -1.44
SNX1-207ENST00000559401 TRAV2A0A0B4J234 112 aa6.06□□□□□ -1.44
SNX1-207ENST00000559401 KIR2DL5BA0A0G2JN68 375 aa6.06□□□□□ -1.44
SNX1-207ENST00000559401 KIR2DL5BA0A0G2JPC4 375 aa6.06□□□□□ -1.44
SNX1-207ENST00000559401 SMCO3A2RU48 225 aa6.06□□□□□ -1.44
SNX1-207ENST00000559401 MPTX1A8MV57 137 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms