RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 OR10G9Q8NGN4 311 aa12.96□□□□□ -0.34
TPM1-219ENST00000559397 OR10G7Q8NGN6 311 aa12.96□□□□□ -0.34
TPM1-219ENST00000559397 OR2T6Q8NHC8 308 aa12.96□□□□□ -0.34
TPM1-219ENST00000559397 SGMS2Q8NHU3 365 aa12.96□□□□□ -0.34
TPM1-219ENST00000559397 ABHD5Q8WTS1 349 aa12.96□□□□□ -0.34
TPM1-219ENST00000559397 SERTAD4Q9NUC0 356 aa12.96□□□□□ -0.34
TPM1-219ENST00000559397 SEC14L6B5MCN3 397 aa12.95□□□□□ -0.34
TPM1-219ENST00000559397 LINC00869P0C866 280 aa12.95□□□□□ -0.34
TPM1-219ENST00000559397 ASPHD1Q5U4P2 390 aa12.95□□□□□ -0.34
TPM1-219ENST00000559397 MIC13Q5XKP0 118 aa12.95□□□□□ -0.34
TPM1-219ENST00000559397 ETFRF1Q6IPR1 90 aa12.95□□□□□ -0.34
TPM1-219ENST00000559397 THAP8Q8NA92 274 aa12.95□□□□□ -0.34
TPM1-219ENST00000559397 WNT10AQ9GZT5 417 aa12.95□□□□□ -0.34
TPM1-219ENST00000559397 LINC00527Q9UJ94 153 aa12.95□□□□□ -0.34
TPM1-219ENST00000559397 ZNF580Q9UK33 172 aa12.95□□□□□ -0.34
TPM1-219ENST00000559397 CTXND1A0A1B0GTU2 59 aa12.94□□□□□ -0.34
TPM1-219ENST00000559397 TMEM218A2RU14 115 aa12.94□□□□□ -0.34
TPM1-219ENST00000559397 NPIPB5A8MRT5 1133 aa12.94□□□□□ -0.34
TPM1-219ENST00000559397 AP4M1O00189 453 aa12.94□□□□□ -0.34
TPM1-219ENST00000559397 GUK1Q16774 197 aa12.94□□□□□ -0.34
TPM1-219ENST00000559397 C19orf54Q5BKX5 351 aa12.94□□□□□ -0.34
TPM1-219ENST00000559397 OR1L6Q8NGR2 347 aa12.94□□□□□ -0.34
TPM1-219ENST00000559397 LINC01006Q8NI28 216 aa12.94□□□□□ -0.34
TPM1-219ENST00000559397 MISP3Q96FF7 219 aa12.94□□□□□ -0.34
TPM1-219ENST00000559397 NOL4LQ96MY1 436 aaPredicted RBP12.94□□□□□ -0.34
TPM1-219ENST00000559397 ACTR3CQ9C0K3 210 aaPredicted RBP12.94□□□□□ -0.34
TPM1-219ENST00000559397 MRPL36Q9P0J6 103 aaKnown RBP12.94□□□□□ -0.34
TPM1-219ENST00000559397 CYB5BO43169 146 aa12.93□□□□□ -0.34
TPM1-219ENST00000559397 B2MP61769 119 aa12.93□□□□□ -0.34
TPM1-219ENST00000559397 PMS2P11Q13670 270 aa12.93□□□□□ -0.34
TPM1-219ENST00000559397 KRTAP24-1Q3LI83 254 aa12.93□□□□□ -0.34
TPM1-219ENST00000559397 LCN15Q6UWW0 184 aa12.93□□□□□ -0.34
TPM1-219ENST00000559397 TTC9CQ8N5M4 171 aa12.93□□□□□ -0.34
TPM1-219ENST00000559397 STPG3Q8N7X2 389 aa12.93□□□□□ -0.34
TPM1-219ENST00000559397 OR4F5Q8NH21 305 aa12.93□□□□□ -0.34
TPM1-219ENST00000559397 ACY3Q96HD9 319 aa12.93□□□□□ -0.34
TPM1-219ENST00000559397 SLC39A9Q9NUM3 307 aa12.93□□□□□ -0.34
TPM1-219ENST00000559397 A0A1B0GV50 99 aa12.93□□□□□ -0.34
TPM1-219ENST00000559397 MAP1LC3B2A6NCE7 125 aa12.93□□□□□ -0.34
TPM1-219ENST00000559397 G3V318 75 aa12.93□□□□□ -0.34
TPM1-219ENST00000559397 I3L2K1 104 aa12.93□□□□□ -0.34
TPM1-219ENST00000559397 OR10J1P30954 320 aa12.93□□□□□ -0.34
TPM1-219ENST00000559397 AKIRIN2Q53H80 203 aa12.93□□□□□ -0.34
TPM1-219ENST00000559397 GCSAMLQ5JQS6 135 aa12.93□□□□□ -0.34
TPM1-219ENST00000559397 TMEM116Q8NCL8 245 aa12.93□□□□□ -0.34
TPM1-219ENST00000559397 NPIPB3Q92617 1050 aa12.93□□□□□ -0.34
TPM1-219ENST00000559397 RAB24Q969Q5 203 aa12.93□□□□□ -0.34
TPM1-219ENST00000559397 MAP1LC3BQ9GZQ8 125 aa12.93□□□□□ -0.34
TPM1-219ENST00000559397 TMEM231Q9H6L2 316 aa12.93□□□□□ -0.34
TPM1-219ENST00000559397 TREM1Q9NP99 234 aa12.93□□□□□ -0.34
TPM1-219ENST00000559397 FBN1P35555 2871 aaKnown RBP12.92□□□□□ -0.34
TPM1-219ENST00000559397 IGKV1D-37A0A075B6S9 117 aa12.92□□□□□ -0.34
TPM1-219ENST00000559397 C9JQL5 133 aa12.92□□□□□ -0.34
TPM1-219ENST00000559397 MT-CO2P00403 227 aa12.92□□□□□ -0.34
TPM1-219ENST00000559397 CFHR3Q02985 330 aa12.92□□□□□ -0.34
TPM1-219ENST00000559397 FAM122CQ6P4D5 195 aa12.92□□□□□ -0.34
TPM1-219ENST00000559397 PBDC1Q9BVG4 233 aa12.92□□□□□ -0.34
TPM1-219ENST00000559397 SMDT1Q9H4I9 107 aa12.92□□□□□ -0.34
TPM1-219ENST00000559397 SLC25A22Q9H936 323 aa12.92□□□□□ -0.34
TPM1-219ENST00000559397 TRAV41A0A0B4J266 112 aa12.91□□□□□ -0.34
TPM1-219ENST00000559397 PPIFP30405 207 aaKnown RBP12.91□□□□□ -0.34
TPM1-219ENST00000559397 CDC34P49427 236 aaPredicted RBP12.91□□□□□ -0.34
TPM1-219ENST00000559397 RND2P52198 227 aa12.91□□□□□ -0.34
TPM1-219ENST00000559397 PEA15Q15121 130 aa12.91□□□□□ -0.34
TPM1-219ENST00000559397 ECSCRQ19T08 205 aa12.91□□□□□ -0.34
TPM1-219ENST00000559397 CYP2G1PQ6ZSU1 146 aa12.91□□□□□ -0.34
TPM1-219ENST00000559397 TMEM68Q96MH6 324 aa12.91□□□□□ -0.34
TPM1-219ENST00000559397 CLPSL1A2RUU4 121 aa12.9□□□□□ -0.34
TPM1-219ENST00000559397 RBFOX3A6NFN3 312 aa12.9□□□□□ -0.34
TPM1-219ENST00000559397 IGHV3-48P01763 117 aa12.9□□□□□ -0.34
TPM1-219ENST00000559397 KLK9Q2XQG4 91 aa12.9□□□□□ -0.34
TPM1-219ENST00000559397 C10orf91Q5T1B1 145 aa12.9□□□□□ -0.34
TPM1-219ENST00000559397 UNQ5815/PRO19632Q6UWF5 114 aa12.9□□□□□ -0.34
TPM1-219ENST00000559397 WIPF2Q8TF74 440 aaPredicted RBP12.9□□□□□ -0.34
TPM1-219ENST00000559397 NARS2Q96I59 477 aaKnown RBP12.9□□□□□ -0.34
TPM1-219ENST00000559397 FANCD2OSQ96PS1 177 aa12.9□□□□□ -0.34
TPM1-219ENST00000559397 KLK9Q9UKQ9 250 aa12.9□□□□□ -0.34
TPM1-219ENST00000559397 ATRQ13535 2644 aa12.9□□□□□ -0.35
TPM1-219ENST00000559397 IGLV11-55A0A075B6I3 123 aa12.89□□□□□ -0.35
TPM1-219ENST00000559397 TCRBV4S1A1TA0A5B7 111 aa12.89□□□□□ -0.35
TPM1-219ENST00000559397 TMEM89A2RUT3 159 aa12.89□□□□□ -0.35
TPM1-219ENST00000559397 K7EIM0 57 aa12.89□□□□□ -0.35
TPM1-219ENST00000559397 DEFA4P12838 97 aa12.89□□□□□ -0.35
TPM1-219ENST00000559397 FGF8P55075 233 aaPredicted RBP12.89□□□□□ -0.35
TPM1-219ENST00000559397 ZNF506Q5JVG8 444 aa12.89□□□□□ -0.35
TPM1-219ENST00000559397 TRGV9Q99603 122 aa12.89□□□□□ -0.35
TPM1-219ENST00000559397 EIF5A2Q9GZV4 153 aaKnown RBP12.89□□□□□ -0.35
TPM1-219ENST00000559397 RNF114Q9Y508 228 aa12.89□□□□□ -0.35
TPM1-219ENST00000559397 EIF3GO75821 320 aaKnown RBP eCLIP12.89□□□□□ -0.35
TPM1-219ENST00000559397 ADCYAP1P18509 176 aa12.89□□□□□ -0.35
TPM1-219ENST00000559397 PROK1P58294 105 aa12.89□□□□□ -0.35
TPM1-219ENST00000559397 SELENOTP62341 195 aa12.89□□□□□ -0.35
TPM1-219ENST00000559397 C10orf99Q6UWK7 81 aa12.89□□□□□ -0.35
TPM1-219ENST00000559397 OR4X1Q8NH49 305 aa12.89□□□□□ -0.35
TPM1-219ENST00000559397 RARRES2Q99969 163 aa12.89□□□□□ -0.35
TPM1-219ENST00000559397 A0A1B0GUS0 222 aa12.88□□□□□ -0.35
TPM1-219ENST00000559397 PSMB11A5LHX3 300 aa12.88□□□□□ -0.35
TPM1-219ENST00000559397 GATA2P23769 480 aaPredicted RBP12.88□□□□□ -0.35
TPM1-219ENST00000559397 FOXL1Q12952 345 aa12.88□□□□□ -0.35
TPM1-219ENST00000559397 KHDC3LQ587J8 217 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms