RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 NAV3Q8IVL0 2385 aa13.35□□□□□ -0.27
SPG11-215ENST00000559193 A0A1W2PPI3 338 aa13.35□□□□□ -0.27
SPG11-215ENST00000559193 REG1AP05451 166 aa13.35□□□□□ -0.27
SPG11-215ENST00000559193 BSPH1Q075Z2 132 aa13.35□□□□□ -0.27
SPG11-215ENST00000559193 MRGPRG-AS1Q2M3A8 158 aa13.35□□□□□ -0.27
SPG11-215ENST00000559193 OR4B1Q8NGF8 309 aa13.35□□□□□ -0.27
SPG11-215ENST00000559193 RITA1Q96K30 269 aa13.35□□□□□ -0.27
SPG11-215ENST00000559193 A0A0G2JNJ9 132 aa13.34□□□□□ -0.27
SPG11-215ENST00000559193 SLC25A17O43808 307 aa13.34□□□□□ -0.27
SPG11-215ENST00000559193 MYCNOSP40205 109 aa13.34□□□□□ -0.27
SPG11-215ENST00000559193 SUB1P53999 127 aaKnown RBP eCLIP13.34□□□□□ -0.27
SPG11-215ENST00000559193 GNG5P63218 68 aa13.34□□□□□ -0.27
SPG11-215ENST00000559193 GDF5OSQ5U4N7 250 aa13.34□□□□□ -0.27
SPG11-215ENST00000559193 NUDT10Q8NFP7 164 aa13.34□□□□□ -0.27
SPG11-215ENST00000559193 TSKUQ8WUA8 353 aa13.34□□□□□ -0.27
SPG11-215ENST00000559193 NUDT11Q96G61 164 aa13.34□□□□□ -0.27
SPG11-215ENST00000559193 C7orf69Q9H7B7 122 aa13.34□□□□□ -0.27
SPG11-215ENST00000559193 CTSZQ9UBR2 303 aa13.34□□□□□ -0.27
SPG11-215ENST00000559193 Q9UFV3 132 aa13.34□□□□□ -0.27
SPG11-215ENST00000559193 TNFRSF13BO14836 293 aaPredicted RBP13.34□□□□□ -0.27
SPG11-215ENST00000559193 CTRLP40313 264 aa13.34□□□□□ -0.27
SPG11-215ENST00000559193 ZNF841Q6ZN19 808 aa13.34□□□□□ -0.27
SPG11-215ENST00000559193 LINC00305Q7Z4B0 112 aa13.34□□□□□ -0.27
SPG11-215ENST00000559193 C8orf31Q8N9H6 132 aa13.34□□□□□ -0.27
SPG11-215ENST00000559193 CCL17Q92583 94 aa13.34□□□□□ -0.27
SPG11-215ENST00000559193 GRAMD2BQ96HH9 432 aa13.34□□□□□ -0.27
SPG11-215ENST00000559193 TMEM68Q96MH6 324 aa13.34□□□□□ -0.27
SPG11-215ENST00000559193 ARFGEF3Q5TH69 2177 aa13.34□□□□□ -0.27
SPG11-215ENST00000559193 C22orf46C9J442 243 aa13.33□□□□□ -0.27
SPG11-215ENST00000559193 C16orf97H3BN30 126 aa13.33□□□□□ -0.27
SPG11-215ENST00000559193 MOSP00540 346 aa13.33□□□□□ -0.27
SPG11-215ENST00000559193 THBDP07204 575 aa13.33□□□□□ -0.27
SPG11-215ENST00000559193 DLX6P56179 175 aa13.33□□□□□ -0.27
SPG11-215ENST00000559193 TBR1Q16650 682 aa13.33□□□□□ -0.27
SPG11-215ENST00000559193 FAM19A2Q8N3H0 131 aa13.33□□□□□ -0.27
SPG11-215ENST00000559193 NUP35Q8NFH5 326 aa13.33□□□□□ -0.27
SPG11-215ENST00000559193 C18orf32Q8TCD1 76 aa13.33□□□□□ -0.27
SPG11-215ENST00000559193 CNOT1A5YKK6 2376 aaKnown RBP13.33□□□□□ -0.28
SPG11-215ENST00000559193 NDUFB3O43676 98 aa13.33□□□□□ -0.28
SPG11-215ENST00000559193 RPLP1P05386 114 aaKnown RBP13.33□□□□□ -0.28
SPG11-215ENST00000559193 LOXP28300 417 aaPredicted RBP13.33□□□□□ -0.28
SPG11-215ENST00000559193 ZNF137PP52743 207 aa13.33□□□□□ -0.28
SPG11-215ENST00000559193 MFAP2P55001 183 aa13.33□□□□□ -0.28
SPG11-215ENST00000559193 RASL11AQ6T310 242 aa13.33□□□□□ -0.28
SPG11-215ENST00000559193 RP1L1Q8IWN7 2480 aaPredicted RBP13.33□□□□□ -0.28
SPG11-215ENST00000559193 A6NNC1 897 aa13.32□□□□□ -0.28
SPG11-215ENST00000559193 C3orf79P0CE67 100 aa13.32□□□□□ -0.28
SPG11-215ENST00000559193 VMA21Q3ZAQ7 101 aa13.32□□□□□ -0.28
SPG11-215ENST00000559193 LRRC10Q5BKY1 277 aa13.32□□□□□ -0.28
SPG11-215ENST00000559193 PRR27Q6MZM9 219 aa13.32□□□□□ -0.28
SPG11-215ENST00000559193 SPACA3Q8IXA5 215 aa13.32□□□□□ -0.28
SPG11-215ENST00000559193 SSUH2Q9Y2M2 353 aa13.32□□□□□ -0.28
SPG11-215ENST00000559193 DMXL1Q9Y485 3027 aa13.32□□□□□ -0.28
SPG11-215ENST00000559193 IGLC7A0M8Q6 106 aa13.31□□□□□ -0.28
SPG11-215ENST00000559193 CORTO00230 105 aa13.31□□□□□ -0.28
SPG11-215ENST00000559193 ZNF25P17030 456 aaPredicted RBP13.31□□□□□ -0.28
SPG11-215ENST00000559193 LHFPL4Q7Z7J7 247 aa13.31□□□□□ -0.28
SPG11-215ENST00000559193 TNFRSF19Q9NS68 423 aa13.31□□□□□ -0.28
SPG11-215ENST00000559193 MRPL27Q9P0M9 148 aaKnown RBP13.31□□□□□ -0.28
SPG11-215ENST00000559193 CRYGCP07315 174 aa13.31□□□□□ -0.28
SPG11-215ENST00000559193 ORM2P19652 201 aa13.31□□□□□ -0.28
SPG11-215ENST00000559193 SPATA45Q537H7 98 aa13.31□□□□□ -0.28
SPG11-215ENST00000559193 HCP5Q6MZN7 132 aa13.31□□□□□ -0.28
SPG11-215ENST00000559193 C19orf35Q6ZS72 473 aa13.31□□□□□ -0.28
SPG11-215ENST00000559193 EPDR1Q9UM22 224 aa13.31□□□□□ -0.28
SPG11-215ENST00000559193 IGHV3-72A0A0B4J1Y9 119 aa13.3□□□□□ -0.28
SPG11-215ENST00000559193 PRRX1P54821 245 aa13.3□□□□□ -0.28
SPG11-215ENST00000559193 TMEM155Q4W5P6 130 aa13.3□□□□□ -0.28
SPG11-215ENST00000559193 OR1B1Q8NGR6 318 aa13.3□□□□□ -0.28
SPG11-215ENST00000559193 BLNKQ8WV28 456 aa13.3□□□□□ -0.28
SPG11-215ENST00000559193 PERPQ96FX8 193 aa13.3□□□□□ -0.28
SPG11-215ENST00000559193 NTF3P20783 257 aa13.3□□□□□ -0.28
SPG11-215ENST00000559193 PVRIGQ6DKI7 326 aa13.3□□□□□ -0.28
SPG11-215ENST00000559193 SGK494Q96LW2 274 aa13.3□□□□□ -0.28
SPG11-215ENST00000559193 HIGD1CA8MV81 97 aa13.29□□□□□ -0.28
SPG11-215ENST00000559193 VWC2LB2RUY7 222 aa13.29□□□□□ -0.28
SPG11-215ENST00000559193 SLC25A5P05141 298 aaKnown RBP13.29□□□□□ -0.28
SPG11-215ENST00000559193 CASP6P55212 293 aa13.29□□□□□ -0.28
SPG11-215ENST00000559193 UBE2G1P62253 170 aa13.29□□□□□ -0.28
SPG11-215ENST00000559193 ENSAO43768 121 aaKnown RBP13.29□□□□□ -0.28
SPG11-215ENST00000559193 IGHV1-8P0DP01 117 aa13.29□□□□□ -0.28
SPG11-215ENST00000559193 HIST1H1EP10412 219 aaKnown RBP13.29□□□□□ -0.28
SPG11-215ENST00000559193 MC5RP33032 325 aa13.29□□□□□ -0.28
SPG11-215ENST00000559193 SSBP4Q9BWG4 385 aaPredicted RBP13.29□□□□□ -0.28
SPG11-215ENST00000559193 MGAQ8IWI9 3026 aa13.29□□□□□ -0.28
SPG11-215ENST00000559193 GPR6P46095 362 aaPredicted RBP13.28□□□□□ -0.28
SPG11-215ENST00000559193 BATFQ16520 125 aa13.28□□□□□ -0.28
SPG11-215ENST00000559193 C11orf42Q8N5U0 333 aa13.28□□□□□ -0.28
SPG11-215ENST00000559193 TRGV9Q99603 122 aa13.28□□□□□ -0.28
SPG11-215ENST00000559193 TMEM208Q9BTX3 173 aa13.28□□□□□ -0.28
SPG11-215ENST00000559193 KLF12Q9Y4X4 402 aa13.28□□□□□ -0.28
SPG11-215ENST00000559193 TTC28Q96AY4 2481 aa13.28□□□□□ -0.28
SPG11-215ENST00000559193 CUL9Q8IWT3 2517 aa13.28□□□□□ -0.28
SPG11-215ENST00000559193 PGPA6NDG6 321 aa13.28□□□□□ -0.28
SPG11-215ENST00000559193 OR2J3O76001 311 aa13.28□□□□□ -0.28
SPG11-215ENST00000559193 KLF5Q13887 457 aaPredicted RBP13.28□□□□□ -0.28
SPG11-215ENST00000559193 TNXAQ16473 311 aa13.28□□□□□ -0.28
SPG11-215ENST00000559193 STXBP6Q8NFX7 210 aa13.28□□□□□ -0.28
SPG11-215ENST00000559193 CHRDL1Q9BU40 450 aa13.28□□□□□ -0.28
SPG11-215ENST00000559193 WNT10AQ9GZT5 417 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms