RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 ZNF600Q6ZNG1 722 aa10.38□□□□□ -0.75
TSPAN3-205ENST00000558745 NRARPQ7Z6K4 114 aa10.38□□□□□ -0.75
TSPAN3-205ENST00000558745 SBSPONQ8IVN8 264 aa10.38□□□□□ -0.75
TSPAN3-205ENST00000558745 ZNF431Q8TF32 576 aaPredicted RBP10.38□□□□□ -0.75
TSPAN3-205ENST00000558745 MARC2Q969Z3 335 aa10.38□□□□□ -0.75
TSPAN3-205ENST00000558745 RHPN1-AS1Q9BWJ2 59 aa10.38□□□□□ -0.75
TSPAN3-205ENST00000558745 ZFAND3Q9H8U3 227 aa10.38□□□□□ -0.75
TSPAN3-205ENST00000558745 SMPXQ9UHP9 88 aa10.38□□□□□ -0.75
TSPAN3-205ENST00000558745 HUWE1Q7Z6Z7 4374 aaKnown RBP10.38□□□□□ -0.75
TSPAN3-205ENST00000558745 TRAV14DV4A0A0A6YYC5 116 aa10.37□□□□□ -0.75
TSPAN3-205ENST00000558745 FAM25EA8MYX2 175 aa10.37□□□□□ -0.75
TSPAN3-205ENST00000558745 CHEK1O14757 476 aa10.37□□□□□ -0.75
TSPAN3-205ENST00000558745 MED6O75586 246 aa10.37□□□□□ -0.75
TSPAN3-205ENST00000558745 IGLC1P0CG04 106 aa10.37□□□□□ -0.75
TSPAN3-205ENST00000558745 NKX2-1P43699 371 aaPredicted RBP10.37□□□□□ -0.75
TSPAN3-205ENST00000558745 SPANXN5Q5MJ07 72 aa10.37□□□□□ -0.75
TSPAN3-205ENST00000558745 RBPMS2Q6ZRY4 209 aaKnown RBP10.37□□□□□ -0.75
TSPAN3-205ENST00000558745 SLC16A13Q7RTY0 426 aa10.37□□□□□ -0.75
TSPAN3-205ENST00000558745 C12orf45Q8N5I9 185 aaPredicted RBP10.37□□□□□ -0.75
TSPAN3-205ENST00000558745 DEFB125Q8N687 156 aa10.37□□□□□ -0.75
TSPAN3-205ENST00000558745 ZBTB8BQ8NAP8 495 aaPredicted RBP10.37□□□□□ -0.75
TSPAN3-205ENST00000558745 TMEM116Q8NCL8 245 aa10.37□□□□□ -0.75
TSPAN3-205ENST00000558745 ENKURQ8TC29 256 aa10.37□□□□□ -0.75
TSPAN3-205ENST00000558745 RNF2Q99496 336 aa10.37□□□□□ -0.75
TSPAN3-205ENST00000558745 NEURL2Q9BR09 285 aa10.37□□□□□ -0.75
TSPAN3-205ENST00000558745 IGKV3-7A0A075B6H7 116 aa10.36□□□□□ -0.75
TSPAN3-205ENST00000558745 SLC25A4P12235 298 aa10.36□□□□□ -0.75
TSPAN3-205ENST00000558745 OR10J1P30954 320 aa10.36□□□□□ -0.75
TSPAN3-205ENST00000558745 GAMTQ14353 236 aa10.36□□□□□ -0.75
TSPAN3-205ENST00000558745 ETFRF1Q6IPR1 90 aa10.36□□□□□ -0.75
TSPAN3-205ENST00000558745 GTSCR1Q86UQ5 136 aa10.36□□□□□ -0.75
TSPAN3-205ENST00000558745 NOXA1Q86UR1 476 aa10.36□□□□□ -0.75
TSPAN3-205ENST00000558745 ST8SIA2Q92186 375 aa10.36□□□□□ -0.75
TSPAN3-205ENST00000558745 SSSCA1O60232 199 aa10.35□□□□□ -0.75
TSPAN3-205ENST00000558745 CCNKO75909 580 aa10.35□□□□□ -0.75
TSPAN3-205ENST00000558745 PAX9P55771 341 aa10.35□□□□□ -0.75
TSPAN3-205ENST00000558745 DCTN2Q13561 401 aaKnown RBP10.35□□□□□ -0.75
TSPAN3-205ENST00000558745 C19orf73Q9NVV2 129 aa10.35□□□□□ -0.75
TSPAN3-205ENST00000558745 PSENENQ9NZ42 101 aa10.35□□□□□ -0.75
TSPAN3-205ENST00000558745 UBQLN2Q9UHD9 624 aa10.35□□□□□ -0.75
TSPAN3-205ENST00000558745 IGKV1D-37A0A075B6S9 117 aa10.34□□□□□ -0.75
TSPAN3-205ENST00000558745 TRAV30A0A087WSZ9 112 aa10.34□□□□□ -0.75
TSPAN3-205ENST00000558745 C5orf51A6NDU8 294 aa10.34□□□□□ -0.75
TSPAN3-205ENST00000558745 MBPP02686 304 aaPredicted RBP10.34□□□□□ -0.75
TSPAN3-205ENST00000558745 GPX4P36969 197 aaPredicted RBP10.34□□□□□ -0.75
TSPAN3-205ENST00000558745 TFPI2P48307 235 aa10.34□□□□□ -0.75
TSPAN3-205ENST00000558745 RAB11AP62491 216 aa10.34□□□□□ -0.75
TSPAN3-205ENST00000558745 ZNF90Q03938 601 aa10.34□□□□□ -0.75
TSPAN3-205ENST00000558745 GBGT1Q8N5D6 347 aa10.34□□□□□ -0.75
TSPAN3-205ENST00000558745 OR1S2Q8NGQ3 325 aa10.34□□□□□ -0.75
TSPAN3-205ENST00000558745 CIB3Q96Q77 187 aaPredicted RBP10.34□□□□□ -0.75
TSPAN3-205ENST00000558745 TRAV25A0A0B4J276 109 aa10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 OR11H12B2RN74 326 aa10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 PRSS46E5RG02 174 aa10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 INMT-MINDY4F8WBC2 141 aa10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 DFFBO76075 338 aa10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 IL5P05113 134 aa10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 ATP5IP56385 69 aaPredicted RBP10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 WFDC3Q8IUB2 231 aa10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 Q8WTZ3 238 aa10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 SLC35E1Q96K37 410 aa10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 GINS3Q9BRX5 216 aa10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 TUBA4BQ9H853 241 aa10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 RCL1Q9Y2P8 373 aaKnown RBP10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 STRAPQ9Y3F4 350 aaKnown RBP10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 IGKV1OR2-108A0A075B7D4 117 aa10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 PMS2P5A8MQ11 134 aa10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 TSPAN4O14817 238 aa10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 SIX6O95475 246 aa10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 RD3LP0DJH9 198 aa10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 PSG1P11464 419 aa10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 NPPCP23582 126 aa10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 YPEL3P61236 119 aaPredicted RBP10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 RPP30P78346 268 aaKnown RBP10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 OR2F1Q13607 317 aa10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 USF2Q15853 346 aaPredicted RBP10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 FAM90A2PQ658T7 463 aa10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 LAMTOR1Q6IAA8 161 aa10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 OR8G2PQ6IF36 304 aa10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 TCF24Q7RTU0 167 aa10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 SMIM8Q96KF7 97 aa10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 CITED4Q96RK1 184 aa10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 VSIRQ9H7M9 311 aa10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 LSM5Q9Y4Y9 91 aaKnown RBP10.33□□□□□ -0.76
TSPAN3-205ENST00000558745 C7orf66A4D0T2 115 aa10.32□□□□□ -0.76
TSPAN3-205ENST00000558745 RBMY1BA6NDE4 496 aaKnown RBP10.32□□□□□ -0.76
TSPAN3-205ENST00000558745 RBMY1EA6NEQ0 496 aaKnown RBP10.32□□□□□ -0.76
TSPAN3-205ENST00000558745 ZFP92A6NM28 416 aa10.32□□□□□ -0.76
TSPAN3-205ENST00000558745 A8MZ25 164 aa10.32□□□□□ -0.76
TSPAN3-205ENST00000558745 TOMM40O96008 361 aa10.32□□□□□ -0.76
TSPAN3-205ENST00000558745 IL4P05112 153 aa10.32□□□□□ -0.76
TSPAN3-205ENST00000558745 RBMY1DP0C7P1 496 aaKnown RBP10.32□□□□□ -0.76
TSPAN3-205ENST00000558745 METTL15P1P0C7V9 234 aa10.32□□□□□ -0.76
TSPAN3-205ENST00000558745 TMEM182Q6ZP80 229 aaPredicted RBP10.32□□□□□ -0.76
TSPAN3-205ENST00000558745 OR51G1Q8NGK1 321 aa10.32□□□□□ -0.76
TSPAN3-205ENST00000558745 C2orf50Q96LR7 162 aa10.32□□□□□ -0.76
TSPAN3-205ENST00000558745 METTL26Q96S19 204 aa10.32□□□□□ -0.76
TSPAN3-205ENST00000558745 SRD5A3Q9H8P0 318 aa10.32□□□□□ -0.76
TSPAN3-205ENST00000558745 COL7A1Q02388 2944 aa10.31□□□□□ -0.76
TSPAN3-205ENST00000558745 SCGB2A1O75556 95 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms