RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 CD69Q07108 199 aa11.96□□□□□ -0.49
RABGGTA-206ENST00000558649 TOMM20LQ6UXN7 152 aa11.96□□□□□ -0.49
RABGGTA-206ENST00000558649 NPIPB3Q92617 1050 aa11.96□□□□□ -0.49
RABGGTA-206ENST00000558649 TRAV30A0A087WSZ9 112 aa11.95□□□□□ -0.5
RABGGTA-206ENST00000558649 K7EMT4 169 aa11.95□□□□□ -0.5
RABGGTA-206ENST00000558649 ATP5IP56385 69 aaPredicted RBP11.95□□□□□ -0.5
RABGGTA-206ENST00000558649 CD81P60033 236 aa11.95□□□□□ -0.5
RABGGTA-206ENST00000558649 ID3Q02535 119 aa11.95□□□□□ -0.5
RABGGTA-206ENST00000558649 RBPMS2Q6ZRY4 209 aaKnown RBP11.95□□□□□ -0.5
RABGGTA-206ENST00000558649 TMEM116Q8NCL8 245 aa11.95□□□□□ -0.5
RABGGTA-206ENST00000558649 OR1S2Q8NGQ3 325 aa11.95□□□□□ -0.5
RABGGTA-206ENST00000558649 SLC35E1Q96K37 410 aa11.95□□□□□ -0.5
RABGGTA-206ENST00000558649 GINS3Q9BRX5 216 aa11.95□□□□□ -0.5
RABGGTA-206ENST00000558649 GPN1Q9HCN4 374 aaPredicted RBP11.95□□□□□ -0.5
RABGGTA-206ENST00000558649 PSENENQ9NZ42 101 aa11.95□□□□□ -0.5
RABGGTA-206ENST00000558649 STRAPQ9Y3F4 350 aaKnown RBP11.95□□□□□ -0.5
RABGGTA-206ENST00000558649 PRKDCP78527 4128 aaKnown RBP11.95□□□□□ -0.5
RABGGTA-206ENST00000558649 TRAV14DV4A0A0A6YYC5 116 aa11.94□□□□□ -0.5
RABGGTA-206ENST00000558649 IGHV7-4-1A0A0J9YVY3 117 aa11.94□□□□□ -0.5
RABGGTA-206ENST00000558649 ZNF785A8K8V0 405 aa11.94□□□□□ -0.5
RABGGTA-206ENST00000558649 INMT-MINDY4F8WBC2 141 aa11.94□□□□□ -0.5
RABGGTA-206ENST00000558649 IGKV1-17P01599 117 aa11.94□□□□□ -0.5
RABGGTA-206ENST00000558649 IL5P05113 134 aa11.94□□□□□ -0.5
RABGGTA-206ENST00000558649 IGLC1P0CG04 106 aa11.94□□□□□ -0.5
RABGGTA-206ENST00000558649 ZFAND3Q9H8U3 227 aa11.94□□□□□ -0.5
RABGGTA-206ENST00000558649 SORL1Q92673 2214 aa11.94□□□□□ -0.5
RABGGTA-206ENST00000558649 IGHV3-66A0A0C4DH42 116 aa11.93□□□□□ -0.5
RABGGTA-206ENST00000558649 MBPP02686 304 aaPredicted RBP11.93□□□□□ -0.5
RABGGTA-206ENST00000558649 GAMTQ14353 236 aa11.93□□□□□ -0.5
RABGGTA-206ENST00000558649 Q8N1Y9 231 aa11.93□□□□□ -0.5
RABGGTA-206ENST00000558649 B9D2Q9BPU9 175 aa11.93□□□□□ -0.5
RABGGTA-206ENST00000558649 RHPN1-AS1Q9BWJ2 59 aa11.93□□□□□ -0.5
RABGGTA-206ENST00000558649 SMPXQ9UHP9 88 aa11.93□□□□□ -0.5
RABGGTA-206ENST00000558649 RCL1Q9Y2P8 373 aaKnown RBP11.93□□□□□ -0.5
RABGGTA-206ENST00000558649 LSM5Q9Y4Y9 91 aaKnown RBP11.93□□□□□ -0.5
RABGGTA-206ENST00000558649 ZFP92A6NM28 416 aa11.92□□□□□ -0.5
RABGGTA-206ENST00000558649 CHEK1O14757 476 aa11.92□□□□□ -0.5
RABGGTA-206ENST00000558649 CD7P09564 240 aa11.92□□□□□ -0.5
RABGGTA-206ENST00000558649 IGHV4-30-4P0DP06 118 aa11.92□□□□□ -0.5
RABGGTA-206ENST00000558649 GPX4P36969 197 aaPredicted RBP11.92□□□□□ -0.5
RABGGTA-206ENST00000558649 OR8G2PQ6IF36 304 aa11.92□□□□□ -0.5
RABGGTA-206ENST00000558649 GSG1LQ6UXU4 331 aa11.92□□□□□ -0.5
RABGGTA-206ENST00000558649 RNF2Q99496 336 aa11.92□□□□□ -0.5
RABGGTA-206ENST00000558649 ASCL2Q99929 193 aa11.92□□□□□ -0.5
RABGGTA-206ENST00000558649 NEURL2Q9BR09 285 aa11.92□□□□□ -0.5
RABGGTA-206ENST00000558649 IGKV3-7A0A075B6H7 116 aa11.91□□□□□ -0.5
RABGGTA-206ENST00000558649 GOSR2O14653 212 aa11.91□□□□□ -0.5
RABGGTA-206ENST00000558649 PRAF2O60831 178 aa11.91□□□□□ -0.5
RABGGTA-206ENST00000558649 APOHP02749 345 aaPredicted RBP11.91□□□□□ -0.5
RABGGTA-206ENST00000558649 FRMD6-AS1P0C7T7 363 aa11.91□□□□□ -0.5
RABGGTA-206ENST00000558649 S100A10P60903 97 aa11.91□□□□□ -0.5
RABGGTA-206ENST00000558649 LAMTOR1Q6IAA8 161 aa11.91□□□□□ -0.5
RABGGTA-206ENST00000558649 Q8WTZ3 238 aa11.91□□□□□ -0.5
RABGGTA-206ENST00000558649 ST8SIA2Q92186 375 aa11.91□□□□□ -0.5
RABGGTA-206ENST00000558649 SMIM8Q96KF7 97 aa11.91□□□□□ -0.5
RABGGTA-206ENST00000558649 C2orf50Q96LR7 162 aa11.91□□□□□ -0.5
RABGGTA-206ENST00000558649 METTL26Q96S19 204 aa11.91□□□□□ -0.5
RABGGTA-206ENST00000558649 RAB40CQ96S21 281 aa11.91□□□□□ -0.5
RABGGTA-206ENST00000558649 MARVELD1Q9BSK0 173 aa11.91□□□□□ -0.5
RABGGTA-206ENST00000558649 WFDC10AQ9H1F0 79 aa11.91□□□□□ -0.5
RABGGTA-206ENST00000558649 TRAV25A0A0B4J276 109 aa11.9□□□□□ -0.5
RABGGTA-206ENST00000558649 SMCO3A2RU48 225 aa11.9□□□□□ -0.5
RABGGTA-206ENST00000558649 L7N2F9 121 aa11.9□□□□□ -0.5
RABGGTA-206ENST00000558649 CCNKO75909 580 aa11.9□□□□□ -0.5
RABGGTA-206ENST00000558649 IL4P05112 153 aa11.9□□□□□ -0.5
RABGGTA-206ENST00000558649 METTL15P1P0C7V9 234 aa11.9□□□□□ -0.5
RABGGTA-206ENST00000558649 RD3LP0DJH9 198 aa11.9□□□□□ -0.5
RABGGTA-206ENST00000558649 NPPCP23582 126 aa11.9□□□□□ -0.5
RABGGTA-206ENST00000558649 BMI1P35226 326 aa11.9□□□□□ -0.5
RABGGTA-206ENST00000558649 PAX9P55771 341 aa11.9□□□□□ -0.5
RABGGTA-206ENST00000558649 YPEL3P61236 119 aaPredicted RBP11.9□□□□□ -0.5
RABGGTA-206ENST00000558649 VAMP2P63027 116 aa11.9□□□□□ -0.5
RABGGTA-206ENST00000558649 AKR1C1Q04828 323 aa11.9□□□□□ -0.5
RABGGTA-206ENST00000558649 ACOT7LQ6ZUV0 252 aa11.9□□□□□ -0.5
RABGGTA-206ENST00000558649 TUBA4BQ9H853 241 aa11.9□□□□□ -0.5
RABGGTA-206ENST00000558649 SNRPGP15A8MWD9 76 aa11.89□□□□□ -0.51
RABGGTA-206ENST00000558649 PRSS46E5RG02 174 aa11.89□□□□□ -0.51
RABGGTA-206ENST00000558649 K7EPK0 472 aa11.89□□□□□ -0.51
RABGGTA-206ENST00000558649 SIX6O95475 246 aa11.89□□□□□ -0.51
RABGGTA-206ENST00000558649 TOMM40O96008 361 aa11.89□□□□□ -0.51
RABGGTA-206ENST00000558649 PSG1P11464 419 aa11.89□□□□□ -0.51
RABGGTA-206ENST00000558649 TFPI2P48307 235 aa11.89□□□□□ -0.51
RABGGTA-206ENST00000558649 RRAS2P62070 204 aaPredicted RBP11.89□□□□□ -0.51
RABGGTA-206ENST00000558649 ZNF90Q03938 601 aa11.89□□□□□ -0.51
RABGGTA-206ENST00000558649 DEFB125Q8N687 156 aa11.89□□□□□ -0.51
RABGGTA-206ENST00000558649 NARS2Q96I59 477 aaKnown RBP11.89□□□□□ -0.51
RABGGTA-206ENST00000558649 PBDC1Q9BVG4 233 aa11.89□□□□□ -0.51
RABGGTA-206ENST00000558649 IGKV1D-37A0A075B6S9 117 aa11.88□□□□□ -0.51
RABGGTA-206ENST00000558649 C7orf66A4D0T2 115 aa11.88□□□□□ -0.51
RABGGTA-206ENST00000558649 OR11H12B2RN74 326 aa11.88□□□□□ -0.51
RABGGTA-206ENST00000558649 TSPAN4O14817 238 aa11.88□□□□□ -0.51
RABGGTA-206ENST00000558649 SSNA1O43805 119 aa11.88□□□□□ -0.51
RABGGTA-206ENST00000558649 BCAP31P51572 246 aa11.88□□□□□ -0.51
RABGGTA-206ENST00000558649 RPL11P62913 178 aaKnown RBP11.88□□□□□ -0.51
RABGGTA-206ENST00000558649 OR2F1Q13607 317 aa11.88□□□□□ -0.51
RABGGTA-206ENST00000558649 USF2Q15853 346 aaPredicted RBP11.88□□□□□ -0.51
RABGGTA-206ENST00000558649 TCF24Q7RTU0 167 aa11.88□□□□□ -0.51
RABGGTA-206ENST00000558649 GBGT1Q8N5D6 347 aa11.88□□□□□ -0.51
RABGGTA-206ENST00000558649 SPAG8Q99932 426 aaPredicted RBP11.88□□□□□ -0.51
RABGGTA-206ENST00000558649 TMEM231Q9H6L2 316 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms