RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 NPIPB3Q92617 1050 aa9.34□□□□□ -0.91
SMAD3-205ENST00000558428 ACY3Q96HD9 319 aa9.34□□□□□ -0.91
SMAD3-205ENST00000558428 SLC35E1Q96K37 410 aa9.34□□□□□ -0.91
SMAD3-205ENST00000558428 MARVELD1Q9BSK0 173 aa9.34□□□□□ -0.91
SMAD3-205ENST00000558428 PUS1Q9Y606 427 aaKnown RBP eCLIP9.34□□□□□ -0.91
SMAD3-205ENST00000558428 TGP01266 2768 aa9.34□□□□□ -0.91
SMAD3-205ENST00000558428 IGKV1-17P01599 117 aa9.33□□□□□ -0.92
SMAD3-205ENST00000558428 IGLC1P0CG04 106 aa9.33□□□□□ -0.92
SMAD3-205ENST00000558428 OR10J1P30954 320 aa9.33□□□□□ -0.92
SMAD3-205ENST00000558428 OR1S2Q8NGQ3 325 aa9.33□□□□□ -0.92
SMAD3-205ENST00000558428 GINS3Q9BRX5 216 aa9.33□□□□□ -0.92
SMAD3-205ENST00000558428 PSENENQ9NZ42 101 aa9.33□□□□□ -0.92
SMAD3-205ENST00000558428 STRAPQ9Y3F4 350 aaKnown RBP9.33□□□□□ -0.92
SMAD3-205ENST00000558428 LSM4Q9Y4Z0 139 aaKnown RBP9.33□□□□□ -0.92
SMAD3-205ENST00000558428 TRAV14DV4A0A0A6YYC5 116 aa9.32□□□□□ -0.92
SMAD3-205ENST00000558428 SNRPGP15A8MWD9 76 aa9.32□□□□□ -0.92
SMAD3-205ENST00000558428 MBPP02686 304 aaPredicted RBP9.32□□□□□ -0.92
SMAD3-205ENST00000558428 GPX4P36969 197 aaPredicted RBP9.32□□□□□ -0.92
SMAD3-205ENST00000558428 GAMTQ14353 236 aa9.32□□□□□ -0.92
SMAD3-205ENST00000558428 GUCA2BQ16661 112 aa9.32□□□□□ -0.92
SMAD3-205ENST00000558428 GSG1LQ6UXU4 331 aa9.32□□□□□ -0.92
SMAD3-205ENST00000558428 GTSCR1Q86UQ5 136 aa9.32□□□□□ -0.92
SMAD3-205ENST00000558428 TMEM61Q8N0U2 210 aa9.32□□□□□ -0.92
SMAD3-205ENST00000558428 WDR89Q96FK6 387 aaPredicted RBP9.32□□□□□ -0.92
SMAD3-205ENST00000558428 SMIM8Q96KF7 97 aa9.32□□□□□ -0.92
SMAD3-205ENST00000558428 C2orf50Q96LR7 162 aa9.32□□□□□ -0.92
SMAD3-205ENST00000558428 RAB40CQ96S21 281 aa9.32□□□□□ -0.92
SMAD3-205ENST00000558428 ZFAND3Q9H8U3 227 aa9.32□□□□□ -0.92
SMAD3-205ENST00000558428 RCL1Q9Y2P8 373 aaKnown RBP9.32□□□□□ -0.92
SMAD3-205ENST00000558428 SMAD5-AS1Q9Y6J3 95 aa9.32□□□□□ -0.92
SMAD3-205ENST00000558428 DNAH9Q9NYC9 4486 aa9.32□□□□□ -0.92
SMAD3-205ENST00000558428 IGHV3-49A0A0A0MS15 119 aa9.31□□□□□ -0.92
SMAD3-205ENST00000558428 IGHV7-4-1A0A0J9YVY3 117 aa9.31□□□□□ -0.92
SMAD3-205ENST00000558428 ZNF785A8K8V0 405 aa9.31□□□□□ -0.92
SMAD3-205ENST00000558428 SCAF4O95104 1147 aaKnown RBP9.31□□□□□ -0.92
SMAD3-205ENST00000558428 RBPMS2Q6ZRY4 209 aaKnown RBP9.31□□□□□ -0.92
SMAD3-205ENST00000558428 RHPN1-AS1Q9BWJ2 59 aa9.31□□□□□ -0.92
SMAD3-205ENST00000558428 SMPXQ9UHP9 88 aa9.31□□□□□ -0.92
SMAD3-205ENST00000558428 LSM5Q9Y4Y9 91 aaKnown RBP9.31□□□□□ -0.92
SMAD3-205ENST00000558428 IGHV3OR16-13A0A075B7E8 117 aa9.3□□□□□ -0.92
SMAD3-205ENST00000558428 IGHV3-74A0A0B4J1X5 117 aa9.3□□□□□ -0.92
SMAD3-205ENST00000558428 TRAV25A0A0B4J276 109 aa9.3□□□□□ -0.92
SMAD3-205ENST00000558428 ZFP92A6NM28 416 aa9.3□□□□□ -0.92
SMAD3-205ENST00000558428 PRSS46E5RG02 174 aa9.3□□□□□ -0.92
SMAD3-205ENST00000558428 K7EPK0 472 aa9.3□□□□□ -0.92
SMAD3-205ENST00000558428 L7N2F9 121 aa9.3□□□□□ -0.92
SMAD3-205ENST00000558428 GOSR2O14653 212 aa9.3□□□□□ -0.92
SMAD3-205ENST00000558428 CHEK1O14757 476 aa9.3□□□□□ -0.92
SMAD3-205ENST00000558428 PTTG1O95997 202 aa9.3□□□□□ -0.92
SMAD3-205ENST00000558428 PAX9P55771 341 aa9.3□□□□□ -0.92
SMAD3-205ENST00000558428 TAS2R30P59541 319 aa9.3□□□□□ -0.92
SMAD3-205ENST00000558428 YPEL3P61236 119 aaPredicted RBP9.3□□□□□ -0.92
SMAD3-205ENST00000558428 VAMP2P63027 116 aa9.3□□□□□ -0.92
SMAD3-205ENST00000558428 LAMTOR1Q6IAA8 161 aa9.3□□□□□ -0.92
SMAD3-205ENST00000558428 OR8G2PQ6IF36 304 aa9.3□□□□□ -0.92
SMAD3-205ENST00000558428 Q8N1Y9 231 aa9.3□□□□□ -0.92
SMAD3-205ENST00000558428 Q8WTZ3 238 aa9.3□□□□□ -0.92
SMAD3-205ENST00000558428 C7orf66A4D0T2 115 aa9.29□□□□□ -0.92
SMAD3-205ENST00000558428 TSC22D2O75157 780 aa9.29□□□□□ -0.92
SMAD3-205ENST00000558428 TOMM40O96008 361 aa9.29□□□□□ -0.92
SMAD3-205ENST00000558428 METTL15P1P0C7V9 234 aa9.29□□□□□ -0.92
SMAD3-205ENST00000558428 RD3LP0DJH9 198 aa9.29□□□□□ -0.92
SMAD3-205ENST00000558428 NPPCP23582 126 aa9.29□□□□□ -0.92
SMAD3-205ENST00000558428 BMI1P35226 326 aa9.29□□□□□ -0.92
SMAD3-205ENST00000558428 CD81P60033 236 aa9.29□□□□□ -0.92
SMAD3-205ENST00000558428 S100A10P60903 97 aa9.29□□□□□ -0.92
SMAD3-205ENST00000558428 METTL26Q96S19 204 aa9.29□□□□□ -0.92
SMAD3-205ENST00000558428 RNF2Q99496 336 aa9.29□□□□□ -0.92
SMAD3-205ENST00000558428 IGKV1D-37A0A075B6S9 117 aa9.28□□□□□ -0.92
SMAD3-205ENST00000558428 IGHV3-66A0A0C4DH42 116 aa9.28□□□□□ -0.92
SMAD3-205ENST00000558428 SMCO3A2RU48 225 aa9.28□□□□□ -0.92
SMAD3-205ENST00000558428 TSPAN4O14817 238 aa9.28□□□□□ -0.92
SMAD3-205ENST00000558428 SSNA1O43805 119 aa9.28□□□□□ -0.92
SMAD3-205ENST00000558428 CCNKO75909 580 aa9.28□□□□□ -0.92
SMAD3-205ENST00000558428 SIX6O95475 246 aa9.28□□□□□ -0.92
SMAD3-205ENST00000558428 APOHP02749 345 aaPredicted RBP9.28□□□□□ -0.92
SMAD3-205ENST00000558428 IL4P05112 153 aa9.28□□□□□ -0.92
SMAD3-205ENST00000558428 CD7P09564 240 aa9.28□□□□□ -0.92
SMAD3-205ENST00000558428 IGHV4-30-4P0DP06 118 aa9.28□□□□□ -0.92
SMAD3-205ENST00000558428 PSG1P11464 419 aa9.28□□□□□ -0.92
SMAD3-205ENST00000558428 PVALBP20472 110 aaPredicted RBP9.28□□□□□ -0.92
SMAD3-205ENST00000558428 BCAP31P51572 246 aa9.28□□□□□ -0.92
SMAD3-205ENST00000558428 AKR1C1Q04828 323 aa9.28□□□□□ -0.92
SMAD3-205ENST00000558428 RAB32Q13637 225 aa9.28□□□□□ -0.92
SMAD3-205ENST00000558428 TMEM14EPQ6UXP3 125 aa9.28□□□□□ -0.92
SMAD3-205ENST00000558428 ACOT7LQ6ZUV0 252 aa9.28□□□□□ -0.92
SMAD3-205ENST00000558428 ST8SIA2Q92186 375 aa9.28□□□□□ -0.92
SMAD3-205ENST00000558428 SPAG8Q99932 426 aaPredicted RBP9.28□□□□□ -0.92
SMAD3-205ENST00000558428 B9D2Q9BPU9 175 aa9.28□□□□□ -0.92
SMAD3-205ENST00000558428 NEURL2Q9BR09 285 aa9.28□□□□□ -0.92
SMAD3-205ENST00000558428 VSIRQ9H7M9 311 aa9.28□□□□□ -0.92
SMAD3-205ENST00000558428 A0A1W2PS18 150 aa9.27□□□□□ -0.93
SMAD3-205ENST00000558428 PMS2P5A8MQ11 134 aa9.27□□□□□ -0.93
SMAD3-205ENST00000558428 FABP1P07148 127 aa9.27□□□□□ -0.93
SMAD3-205ENST00000558428 CRYBB3P26998 211 aa9.27□□□□□ -0.93
SMAD3-205ENST00000558428 RRAS2P62070 204 aaPredicted RBP9.27□□□□□ -0.93
SMAD3-205ENST00000558428 ZNF90Q03938 601 aa9.27□□□□□ -0.93
SMAD3-205ENST00000558428 IL15RAQ13261 267 aa9.27□□□□□ -0.93
SMAD3-205ENST00000558428 THAP8Q8NA92 274 aa9.27□□□□□ -0.93
SMAD3-205ENST00000558428 OR10P1Q8NGE3 313 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms