RNA–Protein interactions for RNA: ENST00000558338.1

VPS13C-206, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 1,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-206ENST00000558338 GBGT1Q8N5D6 347 aa5.85□□□□□ -1.47
VPS13C-206ENST00000558338 ST6GALNAC3Q8NDV1 305 aa5.85□□□□□ -1.47
VPS13C-206ENST00000558338 OR2T6Q8NHC8 308 aa5.85□□□□□ -1.47
VPS13C-206ENST00000558338 NPIPB3Q92617 1050 aa5.85□□□□□ -1.47
VPS13C-206ENST00000558338 SMIM12Q96EX1 92 aa5.85□□□□□ -1.47
VPS13C-206ENST00000558338 ZNF503Q96F45 646 aa5.85□□□□□ -1.47
VPS13C-206ENST00000558338 FAM167A-AS1Q96KT0 104 aa5.85□□□□□ -1.47
VPS13C-206ENST00000558338 PAXXQ9BUH6 204 aa5.85□□□□□ -1.47
VPS13C-206ENST00000558338 RAB1BQ9H0U4 201 aa5.85□□□□□ -1.47
VPS13C-206ENST00000558338 CDC42EP3Q9UKI2 254 aa5.85□□□□□ -1.47
VPS13C-206ENST00000558338 INSIG2Q9Y5U4 225 aa5.85□□□□□ -1.47
VPS13C-206ENST00000558338 PPIAL4CA0A0B4J2A2 164 aa5.84□□□□□ -1.47
VPS13C-206ENST00000558338 IGHV1-3A0A0C4DH29 117 aa5.84□□□□□ -1.47
VPS13C-206ENST00000558338 IGLC7A0M8Q6 106 aa5.84□□□□□ -1.47
VPS13C-206ENST00000558338 FAM90A27PA6NNH2 459 aa5.84□□□□□ -1.47
VPS13C-206ENST00000558338 BUB1B-PAK6H3BSN5 160 aa5.84□□□□□ -1.47
VPS13C-206ENST00000558338 CRYGCP07315 174 aa5.84□□□□□ -1.47
VPS13C-206ENST00000558338 CRYGBP07316 175 aa5.84□□□□□ -1.47
VPS13C-206ENST00000558338 FAM87AP0C7U9 286 aa5.84□□□□□ -1.47
VPS13C-206ENST00000558338 PPIAL4GP0DN37 164 aa5.84□□□□□ -1.47
VPS13C-206ENST00000558338 HNF1AP20823 631 aa5.84□□□□□ -1.47
VPS13C-206ENST00000558338 GATA2P23769 480 aaPredicted RBP5.84□□□□□ -1.47
VPS13C-206ENST00000558338 KLRB1Q12918 225 aa5.84□□□□□ -1.47
VPS13C-206ENST00000558338 DIAPH2-AS1Q14236 149 aa5.84□□□□□ -1.47
VPS13C-206ENST00000558338 TNXAQ16473 311 aa5.84□□□□□ -1.47
VPS13C-206ENST00000558338 OR1L6Q8NGR2 347 aa5.84□□□□□ -1.47
VPS13C-206ENST00000558338 RPEQ96AT9 228 aa5.84□□□□□ -1.47
VPS13C-206ENST00000558338 TIMD4Q96H15 378 aa5.84□□□□□ -1.47
VPS13C-206ENST00000558338 IGF2BP2-AS1Q96M15 143 aa5.84□□□□□ -1.47
VPS13C-206ENST00000558338 GNB1LQ9BYB4 327 aa5.84□□□□□ -1.47
VPS13C-206ENST00000558338 FNDC4Q9H6D8 234 aaPredicted RBP5.84□□□□□ -1.47
VPS13C-206ENST00000558338 ZNF355PQ9NSJ1 428 aa5.84□□□□□ -1.47
VPS13C-206ENST00000558338 V9GYV3 84 aa5.84□□□□□ -1.47
VPS13C-206ENST00000558338 ZGRF1Q86YA3 2104 aa5.84□□□□□ -1.47
VPS13C-206ENST00000558338 E7EUB6 86 aa5.83□□□□□ -1.48
VPS13C-206ENST00000558338 LIPFP07098 398 aa5.83□□□□□ -1.48
VPS13C-206ENST00000558338 CD33P20138 364 aa5.83□□□□□ -1.48
VPS13C-206ENST00000558338 ADMP35318 185 aa5.83□□□□□ -1.48
VPS13C-206ENST00000558338 DEFA6Q01524 100 aa5.83□□□□□ -1.48
VPS13C-206ENST00000558338 MLANAQ16655 118 aa5.83□□□□□ -1.48
VPS13C-206ENST00000558338 IQCJQ1A5X6 159 aa5.83□□□□□ -1.48
VPS13C-206ENST00000558338 C10orf55Q5SWW7 151 aa5.83□□□□□ -1.48
VPS13C-206ENST00000558338 IBA57Q5T440 356 aaKnown RBP5.83□□□□□ -1.48
VPS13C-206ENST00000558338 ZNF841Q6ZN19 808 aa5.83□□□□□ -1.48
VPS13C-206ENST00000558338 PPP1R27Q86WC6 154 aa5.83□□□□□ -1.48
VPS13C-206ENST00000558338 C11orf42Q8N5U0 333 aa5.83□□□□□ -1.48
VPS13C-206ENST00000558338 TMEM116Q8NCL8 245 aa5.83□□□□□ -1.48
VPS13C-206ENST00000558338 TNFRSF19Q9NS68 423 aa5.83□□□□□ -1.48
VPS13C-206ENST00000558338 SIGLEC9Q9Y336 463 aa5.83□□□□□ -1.48
VPS13C-206ENST00000558338 IGKV1D-37A0A075B6S9 117 aa5.83□□□□□ -1.48
VPS13C-206ENST00000558338 CCL21O00585 134 aa5.83□□□□□ -1.48
VPS13C-206ENST00000558338 PEX7O00628 323 aa5.83□□□□□ -1.48
VPS13C-206ENST00000558338 CEACAM3P40198 252 aa5.83□□□□□ -1.48
VPS13C-206ENST00000558338 PLP1P60201 277 aa5.83□□□□□ -1.48
VPS13C-206ENST00000558338 RANP62826 216 aaKnown RBP5.83□□□□□ -1.48
VPS13C-206ENST00000558338 PAFAH1B2P68402 229 aa5.83□□□□□ -1.48
VPS13C-206ENST00000558338 CX3CL1P78423 397 aa5.83□□□□□ -1.48
VPS13C-206ENST00000558338 RASL11AQ6T310 242 aa5.83□□□□□ -1.48
VPS13C-206ENST00000558338 FAM231DQ6ZW35 169 aa5.83□□□□□ -1.48
VPS13C-206ENST00000558338 LINC00469Q8N7U9 141 aa5.83□□□□□ -1.48
VPS13C-206ENST00000558338 NEU4Q8WWR8 484 aaPredicted RBP5.83□□□□□ -1.48
VPS13C-206ENST00000558338 MISP3Q96FF7 219 aa5.83□□□□□ -1.48
VPS13C-206ENST00000558338 NOL4LQ96MY1 436 aaPredicted RBP5.83□□□□□ -1.48
VPS13C-206ENST00000558338 MRPL18Q9H0U6 180 aaKnown RBP5.83□□□□□ -1.48
VPS13C-206ENST00000558338 TPSG1Q9NRR2 321 aa5.83□□□□□ -1.48
VPS13C-206ENST00000558338 F11RQ9Y624 299 aaKnown RBP5.83□□□□□ -1.48
VPS13C-206ENST00000558338 SPENQ96T58 3664 aaKnown RBP5.83□□□□□ -1.48
VPS13C-206ENST00000558338 FRYQ5TBA9 3013 aa5.82□□□□□ -1.48
VPS13C-206ENST00000558338 SNURFLB1AK76 121 aa5.82□□□□□ -1.48
VPS13C-206ENST00000558338 M0R1W7 72 aa5.82□□□□□ -1.48
VPS13C-206ENST00000558338 SLC17A3O00476 420 aa5.82□□□□□ -1.48
VPS13C-206ENST00000558338 FCN1O00602 326 aa5.82□□□□□ -1.48
VPS13C-206ENST00000558338 HYPMO75409 117 aa5.82□□□□□ -1.48
VPS13C-206ENST00000558338 PLAUP00749 431 aa5.82□□□□□ -1.48
VPS13C-206ENST00000558338 HLA-DQA1P01909 254 aa5.82□□□□□ -1.48
VPS13C-206ENST00000558338 AMY1AP04745 511 aa5.82□□□□□ -1.48
VPS13C-206ENST00000558338 GZMBP10144 247 aa5.82□□□□□ -1.48
VPS13C-206ENST00000558338 MGST1P10620 155 aaKnown RBP5.82□□□□□ -1.48
VPS13C-206ENST00000558338 ESDP10768 282 aa5.82□□□□□ -1.48
VPS13C-206ENST00000558338 CRISP2P16562 243 aa5.82□□□□□ -1.48
VPS13C-206ENST00000558338 TPPP2P59282 170 aa5.82□□□□□ -1.48
VPS13C-206ENST00000558338 MRGPRG-AS1Q2M3A8 158 aa5.82□□□□□ -1.48
VPS13C-206ENST00000558338 LINC00305Q7Z4B0 112 aa5.82□□□□□ -1.48
VPS13C-206ENST00000558338 ZNF329Q86UD4 541 aa5.82□□□□□ -1.48
VPS13C-206ENST00000558338 OR8I2Q8N0Y5 310 aa5.82□□□□□ -1.48
VPS13C-206ENST00000558338 CMTM2Q8TAZ6 248 aa5.82□□□□□ -1.48
VPS13C-206ENST00000558338 LINC01560Q8TB33 94 aa5.82□□□□□ -1.48
VPS13C-206ENST00000558338 FXYD5Q96DB9 178 aa5.82□□□□□ -1.48
VPS13C-206ENST00000558338 CBLN4Q9NTU7 201 aa5.82□□□□□ -1.48
VPS13C-206ENST00000558338 LOC400499M0QZD8 3231 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 IGHV3-72A0A0B4J1Y9 119 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 SMIM27A0A1W2PRY6 76 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 REG1AP05451 166 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 CBLN1P23435 193 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 COX7A1P24310 79 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 COL8A2P25067 703 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 UBE2G1P62253 170 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 SSBP2P81877 361 aaPredicted RBP5.81□□□□□ -1.48
VPS13C-206ENST00000558338 Q0VG73 95 aa5.81□□□□□ -1.48
VPS13C-206ENST00000558338 OR5I1Q13606 314 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms