RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 DERL1Q9BUN8 251 aa6.68□□□□□ -1.34
SPG11-209ENST00000558253 GNB1LQ9BYB4 327 aa6.68□□□□□ -1.34
SPG11-209ENST00000558253 TNFRSF19Q9NS68 423 aa6.68□□□□□ -1.34
SPG11-209ENST00000558253 F11RQ9Y624 299 aaKnown RBP6.68□□□□□ -1.34
SPG11-209ENST00000558253 DSCAML1Q8TD84 2053 aa6.68□□□□□ -1.34
SPG11-209ENST00000558253 TTC28Q96AY4 2481 aa6.68□□□□□ -1.34
SPG11-209ENST00000558253 TRAV30A0A087WSZ9 112 aa6.67□□□□□ -1.34
SPG11-209ENST00000558253 A0A1W2PPI3 338 aa6.67□□□□□ -1.34
SPG11-209ENST00000558253 DLEU1O43261 78 aa6.67□□□□□ -1.34
SPG11-209ENST00000558253 SCGB2A1O75556 95 aa6.67□□□□□ -1.34
SPG11-209ENST00000558253 RD3LP0DJH9 198 aa6.67□□□□□ -1.34
SPG11-209ENST00000558253 DEFA4P12838 97 aa6.67□□□□□ -1.34
SPG11-209ENST00000558253 PRTN3P24158 256 aa6.67□□□□□ -1.34
SPG11-209ENST00000558253 CRYBB3P26998 211 aa6.67□□□□□ -1.34
SPG11-209ENST00000558253 GPR6P46095 362 aaPredicted RBP6.67□□□□□ -1.34
SPG11-209ENST00000558253 LGALS4P56470 323 aa6.67□□□□□ -1.34
SPG11-209ENST00000558253 SUMO1P63165 101 aaKnown RBP6.67□□□□□ -1.34
SPG11-209ENST00000558253 PAFAH1B2P68402 229 aa6.67□□□□□ -1.34
SPG11-209ENST00000558253 TNXAQ16473 311 aa6.67□□□□□ -1.34
SPG11-209ENST00000558253 MRGPRG-AS1Q2M3A8 158 aa6.67□□□□□ -1.34
SPG11-209ENST00000558253 SAPCD1Q5SSQ6 148 aa6.67□□□□□ -1.34
SPG11-209ENST00000558253 TPTE2P1Q5T6R2 138 aa6.67□□□□□ -1.34
SPG11-209ENST00000558253 NPBQ8NG41 125 aa6.67□□□□□ -1.34
SPG11-209ENST00000558253 OR5AU1Q8NGC0 362 aa6.67□□□□□ -1.34
SPG11-209ENST00000558253 OR2T6Q8NHC8 308 aa6.67□□□□□ -1.34
SPG11-209ENST00000558253 LINC01560Q8TB33 94 aa6.67□□□□□ -1.34
SPG11-209ENST00000558253 ZNF503Q96F45 646 aa6.67□□□□□ -1.34
SPG11-209ENST00000558253 ELOVL1Q9BW60 279 aa6.67□□□□□ -1.34
SPG11-209ENST00000558253 SLC25A2Q9BXI2 301 aa6.67□□□□□ -1.34
SPG11-209ENST00000558253 KRTAP9-2Q9BYQ4 174 aa6.67□□□□□ -1.34
SPG11-209ENST00000558253 GSX1Q9H4S2 264 aaPredicted RBP6.67□□□□□ -1.34
SPG11-209ENST00000558253 C7orf69Q9H7B7 122 aa6.67□□□□□ -1.34
SPG11-209ENST00000558253 ZNF355PQ9NSJ1 428 aa6.67□□□□□ -1.34
SPG11-209ENST00000558253 TMEM14CQ9P0S9 112 aa6.67□□□□□ -1.34
SPG11-209ENST00000558253 ZNRD1Q9P1U0 126 aa6.67□□□□□ -1.34
SPG11-209ENST00000558253 DPM3Q9P2X0 92 aa6.67□□□□□ -1.34
SPG11-209ENST00000558253 HCFC1P51610 2035 aa6.66□□□□□ -1.34
SPG11-209ENST00000558253 IGKV1D-37A0A075B6S9 117 aa6.66□□□□□ -1.34
SPG11-209ENST00000558253 LOC105371242A0A075B767 164 aa6.66□□□□□ -1.34
SPG11-209ENST00000558253 FAM90A27PA6NNH2 459 aa6.66□□□□□ -1.34
SPG11-209ENST00000558253 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.66□□□□□ -1.34
SPG11-209ENST00000558253 GGTLC3B5MD39 225 aa6.66□□□□□ -1.34
SPG11-209ENST00000558253 K7EN84 100 aa6.66□□□□□ -1.34
SPG11-209ENST00000558253 GOSR1O95249 250 aa6.66□□□□□ -1.34
SPG11-209ENST00000558253 IGLV1-40P01703 118 aa6.66□□□□□ -1.34
SPG11-209ENST00000558253 GZMBP10144 247 aa6.66□□□□□ -1.34
SPG11-209ENST00000558253 ESDP10768 282 aa6.66□□□□□ -1.34
SPG11-209ENST00000558253 PCP4P48539 62 aa6.66□□□□□ -1.34
SPG11-209ENST00000558253 CX3CL1P78423 397 aa6.66□□□□□ -1.34
SPG11-209ENST00000558253 Q0VG73 95 aa6.66□□□□□ -1.34
SPG11-209ENST00000558253 MLANAQ16655 118 aa6.66□□□□□ -1.34
SPG11-209ENST00000558253 TMEM183BQ1AE95 376 aa6.66□□□□□ -1.34
SPG11-209ENST00000558253 MINOS1Q5TGZ0 78 aa6.66□□□□□ -1.34
SPG11-209ENST00000558253 DTX2Q86UW9 622 aa6.66□□□□□ -1.34
SPG11-209ENST00000558253 ZNF48Q96MX3 618 aaPredicted RBP6.66□□□□□ -1.34
SPG11-209ENST00000558253 FNDC4Q9H6D8 234 aaPredicted RBP6.66□□□□□ -1.34
SPG11-209ENST00000558253 KLF12Q9Y4X4 402 aa6.66□□□□□ -1.34
SPG11-209ENST00000558253 MINOS1-NBL1R4GNA1 71 aa6.66□□□□□ -1.34
SPG11-209ENST00000558253 V9GYV3 84 aa6.66□□□□□ -1.34
SPG11-209ENST00000558253 MUC3AQ02505 3323 aa6.66□□□□□ -1.34
SPG11-209ENST00000558253 RAI1Q7Z5J4 1906 aaPredicted RBP6.66□□□□□ -1.34
SPG11-209ENST00000558253 ZNF292O60281 2723 aa6.65□□□□□ -1.34
SPG11-209ENST00000558253 URB1O60287 2271 aaKnown RBP6.65□□□□□ -1.34
SPG11-209ENST00000558253 TRBV6-1A0A0K0K1D8 114 aa6.65□□□□□ -1.34
SPG11-209ENST00000558253 SMIM27A0A1W2PRY6 76 aa6.65□□□□□ -1.34
SPG11-209ENST00000558253 C22orf46C9J442 243 aa6.65□□□□□ -1.34
SPG11-209ENST00000558253 E7EUB6 86 aa6.65□□□□□ -1.34
SPG11-209ENST00000558253 PEX7O00628 323 aa6.65□□□□□ -1.34
SPG11-209ENST00000558253 MOSP00540 346 aa6.65□□□□□ -1.34
SPG11-209ENST00000558253 PLAUP00749 431 aa6.65□□□□□ -1.34
SPG11-209ENST00000558253 AMBPP02760 352 aa6.65□□□□□ -1.34
SPG11-209ENST00000558253 HIST1H1EP10412 219 aaKnown RBP6.65□□□□□ -1.34
SPG11-209ENST00000558253 MYCNOSP40205 109 aa6.65□□□□□ -1.34
SPG11-209ENST00000558253 NHLH1Q02575 133 aa6.65□□□□□ -1.34
SPG11-209ENST00000558253 DIAPH2-AS1Q14236 149 aa6.65□□□□□ -1.34
SPG11-209ENST00000558253 IBA57Q5T440 356 aaKnown RBP6.65□□□□□ -1.34
SPG11-209ENST00000558253 C1orf194Q5T5A4 169 aa6.65□□□□□ -1.34
SPG11-209ENST00000558253 CYB5R2Q6BCY4 276 aa6.65□□□□□ -1.34
SPG11-209ENST00000558253 C11orf71Q6IPW1 123 aa6.65□□□□□ -1.34
SPG11-209ENST00000558253 PATE2Q6UY27 113 aa6.65□□□□□ -1.34
SPG11-209ENST00000558253 LINC00305Q7Z4B0 112 aa6.65□□□□□ -1.34
SPG11-209ENST00000558253 ZNF329Q86UD4 541 aa6.65□□□□□ -1.34
SPG11-209ENST00000558253 LYPD1Q8N2G4 141 aa6.65□□□□□ -1.34
SPG11-209ENST00000558253 GBGT1Q8N5D6 347 aa6.65□□□□□ -1.34
SPG11-209ENST00000558253 WIPF2Q8TF74 440 aaPredicted RBP6.65□□□□□ -1.34
SPG11-209ENST00000558253 FXYD5Q96DB9 178 aa6.65□□□□□ -1.34
SPG11-209ENST00000558253 FMC1Q96HJ9 113 aa6.65□□□□□ -1.34
SPG11-209ENST00000558253 IGF2BP2-AS1Q96M15 143 aa6.65□□□□□ -1.34
SPG11-209ENST00000558253 SSBP3Q9BWW4 388 aaPredicted RBP6.65□□□□□ -1.34
SPG11-209ENST00000558253 PRO1933Q9H354 126 aa6.65□□□□□ -1.34
SPG11-209ENST00000558253 EPDR1Q9UM22 224 aa6.65□□□□□ -1.34
SPG11-209ENST00000558253 SOX21Q9Y651 276 aaPredicted RBP6.65□□□□□ -1.34
SPG11-209ENST00000558253 KIR2DL5BA0A0G2JN68 375 aa6.64□□□□□ -1.35
SPG11-209ENST00000558253 KIR2DL5BA0A0G2JPC4 375 aa6.64□□□□□ -1.35
SPG11-209ENST00000558253 FAM231BA6NCW3 169 aa6.64□□□□□ -1.35
SPG11-209ENST00000558253 IZUMO1RA6ND01 250 aa6.64□□□□□ -1.35
SPG11-209ENST00000558253 ODF3BA8MYP8 253 aa6.64□□□□□ -1.35
SPG11-209ENST00000558253 TEX22C9J3V5 150 aa6.64□□□□□ -1.35
SPG11-209ENST00000558253 NBR2O15453 112 aa6.64□□□□□ -1.35
SPG11-209ENST00000558253 NDUFA3O95167 84 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms