RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 RTL8AQ9BWD3 113 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 C1QTNF6Q9BXI9 259 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 WDR61Q9GZS3 305 aaKnown RBP1.71□□□□□ -2.14
SPG11-206ENST00000558093 AICDAQ9GZX7 198 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 DISP2A7MBM2 1401 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 ATRNO75882 1429 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 MYLKQ15746 1914 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 BAZ1AQ9NRL2 1556 aaPredicted RBP1.71□□□□□ -2.14
SPG11-206ENST00000558093 OBSL1O75147 1896 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 DSCAMO60469 2012 aa1.71□□□□□ -2.14
SPG11-206ENST00000558093 ADGRL2O95490 1459 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 MYOM2P54296 1465 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 SMARCA4P51532 1647 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 TCHHQ07283 1943 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 DSCAML1Q8TD84 2053 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 MYO18AQ92614 2054 aaKnown RBP1.7□□□□□ -2.14
SPG11-206ENST00000558093 TRBV20OR9-2A0A075B6H5 130 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 IGLV3-12A0A075B6K2 115 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 TRAV9-1A0A075B6T8 112 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 IGHV1-69-2A0A0G2JMI3 117 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 IGHV5-10-1A0A0J9YXX1 117 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 PNMA8CA0A1B0GUJ8 204 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 TMEM269A0A1B0GVZ9 245 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 C7orf71A4D174 169 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 DPRXA6NFQ7 191 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 FNDC10F2Z333 226 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 TMEM250H0YL14 139 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 M0R129 80 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 COX7A2LO14548 114 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 FSTL3O95633 263 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 CD14P08571 375 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 LINC00869P0C866 280 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 SCGB1C2P0DMR2 95 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 P0DMU3 169 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 FAM231AP0DMU4 169 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 FAM231CP0DMU5 169 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 HLA-EP13747 358 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 NFYBP25208 207 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 IL3RAP26951 378 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 OR10J1P30954 320 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 SYNJ2BPP57105 145 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 TPPP2P59282 170 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 BTG2P78543 158 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 CPSF1Q10570 1443 aaKnown RBP1.7□□□□□ -2.14
SPG11-206ENST00000558093 DOCK1Q14185 1865 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 TMEM241Q24JQ0 296 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 FAM74A1Q5RGS3 127 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 MYOM3Q5VTT5 1437 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 AMMECR1LQ6DCA0 310 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 EBLN2Q6P2I7 272 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 SPATA31E1Q6ZUB1 1445 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 KTN1-AS1Q86SY8 53 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 PRR15Q8IV56 129 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 ZNF664Q8N3J9 261 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 TEX29Q8N6K0 151 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 PACRGLQ8N7B6 248 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 ZNF645Q8N7E2 425 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 OR2M3Q8NG83 312 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 OR4S1Q8NGB4 309 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 OR2T10Q8NGZ9 312 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 OR51H1Q8NH63 302 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 SGMS2Q8NHU3 365 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 SCGB1C1Q8TD33 95 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 DCANP1Q8TF63 244 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 RAB2BQ8WUD1 216 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 BRK1Q8WUW1 75 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 C18orf15Q96N68 181 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 SDF2Q99470 211 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 CCL13Q99616 98 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 TM2D3Q9BRN9 247 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 GINS4Q9BRT9 223 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 GGTLC1Q9BX51 225 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 IMUPQ9GZP8 106 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 MED28Q9H204 178 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 TMEM133Q9H2Q1 129 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 TCEAL2Q9H3H9 227 aaPredicted RBP1.7□□□□□ -2.14
SPG11-206ENST00000558093 CBLN4Q9NTU7 201 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 TAAR3PQ9P1P4 343 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 COMMD3Q9UBI1 195 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 TP73-AS1Q9UF72 201 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 ATAD5Q96QE3 1844 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 HELZP42694 1942 aaKnown RBP1.7□□□□□ -2.14
SPG11-206ENST00000558093 PLXNB3Q9ULL4 1909 aa1.7□□□□□ -2.14
SPG11-206ENST00000558093 TEX14Q8IWB6 1497 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 ARAP2Q8WZ64 1704 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 TNRC6AQ8NDV7 1962 aaKnown RBP1.69□□□□□ -2.14
SPG11-206ENST00000558093 PTPRTO14522 1441 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 NAIPQ13075 1403 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 TNS2Q63HR2 1409 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 SCAPERQ9BY12 1400 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 YEATS2Q9ULM3 1422 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 TRAPPC8Q9Y2L5 1435 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 A0A087X0T9 212 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 IGKV1D-43A0A0B4J1Z2 117 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 A0A0G2JMM0 328 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 A0A1W2PPB8 328 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 IZUMO1RA6ND01 250 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 CD300LBA8K4G0 201 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 KIR3DP1A8MWS1 328 aa1.69□□□□□ -2.14
SPG11-206ENST00000558093 C9JQL5 133 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 282.7 ms