RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 PFDN2Q9UHV9 154 aa9.66□□□□□ -0.86
TPM1-209ENST00000558072 DMRT1Q9Y5R6 373 aa9.66□□□□□ -0.86
TPM1-209ENST00000558072 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.65□□□□□ -0.86
TPM1-209ENST00000558072 TCRBV4S1A1TA0A5B7 111 aa9.65□□□□□ -0.86
TPM1-209ENST00000558072 SEC11BP0C7V7 166 aa9.65□□□□□ -0.86
TPM1-209ENST00000558072 CAMLGP49069 296 aa9.65□□□□□ -0.86
TPM1-209ENST00000558072 PROK1P58294 105 aa9.65□□□□□ -0.86
TPM1-209ENST00000558072 RPL7L1Q6DKI1 246 aaKnown RBP9.65□□□□□ -0.86
TPM1-209ENST00000558072 LAMTOR1Q6IAA8 161 aa9.65□□□□□ -0.86
TPM1-209ENST00000558072 ZNF491Q8N8L2 437 aa9.65□□□□□ -0.86
TPM1-209ENST00000558072 BPIFCQ8NFQ6 507 aa9.65□□□□□ -0.86
TPM1-209ENST00000558072 Q8WTZ3 238 aa9.65□□□□□ -0.86
TPM1-209ENST00000558072 TMEM158Q8WZ71 300 aa9.65□□□□□ -0.86
TPM1-209ENST00000558072 GINS3Q9BRX5 216 aa9.65□□□□□ -0.86
TPM1-209ENST00000558072 C19orf24Q9BVV8 132 aa9.65□□□□□ -0.86
TPM1-209ENST00000558072 ARV1Q9H2C2 271 aa9.65□□□□□ -0.86
TPM1-209ENST00000558072 LSM4Q9Y4Z0 139 aaKnown RBP9.65□□□□□ -0.86
TPM1-209ENST00000558072 TSSC4Q9Y5U2 329 aaPredicted RBP9.65□□□□□ -0.86
TPM1-209ENST00000558072 UMAD1C9J7I0 102 aa9.64□□□□□ -0.87
TPM1-209ENST00000558072 IFNA7P01567 189 aa9.64□□□□□ -0.87
TPM1-209ENST00000558072 CLEC3BP05452 202 aa9.64□□□□□ -0.87
TPM1-209ENST00000558072 MDKP21741 143 aaPredicted RBP9.64□□□□□ -0.87
TPM1-209ENST00000558072 RPL29P47914 159 aaKnown RBP9.64□□□□□ -0.87
TPM1-209ENST00000558072 RAB5CP51148 216 aa9.64□□□□□ -0.87
TPM1-209ENST00000558072 RUNX1Q01196 453 aa9.64□□□□□ -0.87
TPM1-209ENST00000558072 DEFA5Q01523 94 aa9.64□□□□□ -0.87
TPM1-209ENST00000558072 LRRC20Q8TCA0 184 aa9.64□□□□□ -0.87
TPM1-209ENST00000558072 WIPF2Q8TF74 440 aaPredicted RBP9.64□□□□□ -0.87
TPM1-209ENST00000558072 NPCDR1Q9BY65 106 aa9.64□□□□□ -0.87
TPM1-209ENST00000558072 CYTL1Q9NRR1 136 aa9.64□□□□□ -0.87
TPM1-209ENST00000558072 PEF1Q9UBV8 284 aaKnown RBP9.64□□□□□ -0.87
TPM1-209ENST00000558072 MFSD2BA6NFX1 497 aa9.63□□□□□ -0.87
TPM1-209ENST00000558072 AGPAT2O15120 278 aa9.63□□□□□ -0.87
TPM1-209ENST00000558072 TGOLN2O43493 480 aa9.63□□□□□ -0.87
TPM1-209ENST00000558072 GGCTO75223 188 aaKnown RBP9.63□□□□□ -0.87
TPM1-209ENST00000558072 TSPAN15O95858 294 aa9.63□□□□□ -0.87
TPM1-209ENST00000558072 LGALS1P09382 135 aaKnown RBP9.63□□□□□ -0.87
TPM1-209ENST00000558072 IGLC1P0CG04 106 aa9.63□□□□□ -0.87
TPM1-209ENST00000558072 RD3LP0DJH9 198 aa9.63□□□□□ -0.87
TPM1-209ENST00000558072 ZP3P21754 424 aa9.63□□□□□ -0.87
TPM1-209ENST00000558072 ZNF616Q08AN1 781 aa9.63□□□□□ -0.87
TPM1-209ENST00000558072 MLANAQ16655 118 aa9.63□□□□□ -0.87
TPM1-209ENST00000558072 FAM106AQ4KMX7 169 aa9.63□□□□□ -0.87
TPM1-209ENST00000558072 ZNF600Q6ZNG1 722 aa9.63□□□□□ -0.87
TPM1-209ENST00000558072 CYP2G1PQ6ZSU1 146 aa9.63□□□□□ -0.87
TPM1-209ENST00000558072 OR1L4Q8NGR5 311 aa9.63□□□□□ -0.87
TPM1-209ENST00000558072 OR2G3Q8NGZ4 309 aa9.63□□□□□ -0.87
TPM1-209ENST00000558072 C4orf3Q8WVX3 66 aa9.63□□□□□ -0.87
TPM1-209ENST00000558072 ST8SIA2Q92186 375 aa9.63□□□□□ -0.87
TPM1-209ENST00000558072 RNF2Q99496 336 aa9.63□□□□□ -0.87
TPM1-209ENST00000558072 KLK15Q9H2R5 256 aa9.63□□□□□ -0.87
TPM1-209ENST00000558072 WFDC1Q9HC57 220 aa9.63□□□□□ -0.87
TPM1-209ENST00000558072 NF1P21359 2839 aa9.63□□□□□ -0.87
TPM1-209ENST00000558072 ELOA3CA0A087WX78 387 aaPredicted RBP9.62□□□□□ -0.87
TPM1-209ENST00000558072 IGHV3-21A0A0B4J1V1 117 aa9.62□□□□□ -0.87
TPM1-209ENST00000558072 TOMM40O96008 361 aa9.62□□□□□ -0.87
TPM1-209ENST00000558072 HSPB1P04792 205 aaKnown RBP9.62□□□□□ -0.87
TPM1-209ENST00000558072 RPLP1P05386 114 aaKnown RBP9.62□□□□□ -0.87
TPM1-209ENST00000558072 SPP1P10451 314 aa9.62□□□□□ -0.87
TPM1-209ENST00000558072 ATP6V0CP27449 155 aa9.62□□□□□ -0.87
TPM1-209ENST00000558072 ARL3P36405 182 aa9.62□□□□□ -0.87
TPM1-209ENST00000558072 ACOT6Q3I5F7 207 aaPredicted RBP9.62□□□□□ -0.87
TPM1-209ENST00000558072 KHDC1LQ5JSQ8 128 aa9.62□□□□□ -0.87
TPM1-209ENST00000558072 AKR1C8PQ5T2L2 129 aa9.62□□□□□ -0.87
TPM1-209ENST00000558072 CLEC19AQ6UXS0 136 aa9.62□□□□□ -0.87
TPM1-209ENST00000558072 DPPA3Q6W0C5 159 aa9.62□□□□□ -0.87
TPM1-209ENST00000558072 LCNL1Q6ZST4 164 aa9.62□□□□□ -0.87
TPM1-209ENST00000558072 HSD17B11Q8NBQ5 300 aa9.62□□□□□ -0.87
TPM1-209ENST00000558072 OR51G1Q8NGK1 321 aa9.62□□□□□ -0.87
TPM1-209ENST00000558072 DPF1Q92782 380 aa9.62□□□□□ -0.87
TPM1-209ENST00000558072 PFDN5Q99471 154 aa9.62□□□□□ -0.87
TPM1-209ENST00000558072 GGTLC1Q9BX51 225 aa9.62□□□□□ -0.87
TPM1-209ENST00000558072 SLC45A2Q9UMX9 530 aa9.62□□□□□ -0.87
TPM1-209ENST00000558072 OR2T8A6NH00 312 aa9.61□□□□□ -0.87
TPM1-209ENST00000558072 NUDT19A8MXV4 375 aa9.61□□□□□ -0.87
TPM1-209ENST00000558072 BMPR1BO00238 502 aa9.61□□□□□ -0.87
TPM1-209ENST00000558072 NDUFA4O00483 81 aa9.61□□□□□ -0.87
TPM1-209ENST00000558072 CTSGP08311 255 aa9.61□□□□□ -0.87
TPM1-209ENST00000558072 GPR183P32249 361 aa9.61□□□□□ -0.87
TPM1-209ENST00000558072 BMI1P35226 326 aa9.61□□□□□ -0.87
TPM1-209ENST00000558072 KRTAP10-3P60369 221 aa9.61□□□□□ -0.87
TPM1-209ENST00000558072 B2MP61769 119 aa9.61□□□□□ -0.87
TPM1-209ENST00000558072 NDUFA11Q86Y39 141 aa9.61□□□□□ -0.87
TPM1-209ENST00000558072 NARS2Q96I59 477 aaKnown RBP9.61□□□□□ -0.87
TPM1-209ENST00000558072 MGST2Q99735 147 aa9.61□□□□□ -0.87
TPM1-209ENST00000558072 GNB4Q9HAV0 340 aa9.61□□□□□ -0.87
TPM1-209ENST00000558072 TEX46H3BTG2 121 aa9.6□□□□□ -0.87
TPM1-209ENST00000558072 OR2C1O95371 312 aa9.6□□□□□ -0.87
TPM1-209ENST00000558072 IGHV3-48P01763 117 aa9.6□□□□□ -0.87
TPM1-209ENST00000558072 PLP1P60201 277 aa9.6□□□□□ -0.87
TPM1-209ENST00000558072 KIAA0141Q14154 515 aaPredicted RBP9.6□□□□□ -0.87
TPM1-209ENST00000558072 RPEL1Q2QD12 228 aa9.6□□□□□ -0.87
TPM1-209ENST00000558072 ZNF767PQ75MW2 155 aa9.6□□□□□ -0.87
TPM1-209ENST00000558072 GPHB5Q86YW7 130 aa9.6□□□□□ -0.87
TPM1-209ENST00000558072 C11orf44Q8N8P7 122 aa9.6□□□□□ -0.87
TPM1-209ENST00000558072 GATAD1Q8WUU5 269 aa9.6□□□□□ -0.87
TPM1-209ENST00000558072 RNF141Q8WVD5 230 aa9.6□□□□□ -0.87
TPM1-209ENST00000558072 CCDC140Q96MF4 163 aa9.6□□□□□ -0.87
TPM1-209ENST00000558072 SLC25A32Q9H2D1 315 aa9.6□□□□□ -0.87
TPM1-209ENST00000558072 SLC39A9Q9NUM3 307 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms