RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 GGTLC1Q9BX51 225 aa13.11□□□□□ -0.31
SNX1-203ENST00000558040 SLC25A32Q9H2D1 315 aa13.11□□□□□ -0.31
SNX1-203ENST00000558040 RNF114Q9Y508 228 aa13.11□□□□□ -0.31
SNX1-203ENST00000558040 ZFHX3Q15911 3703 aa13.1□□□□□ -0.31
SNX1-203ENST00000558040 IGKV1OR2-108A0A075B7D4 117 aa13.1□□□□□ -0.31
SNX1-203ENST00000558040 TCRBV4S1A1TA0A5B7 111 aa13.1□□□□□ -0.31
SNX1-203ENST00000558040 IGHV3-23P01764 117 aa13.1□□□□□ -0.31
SNX1-203ENST00000558040 IGLC1P0CG04 106 aa13.1□□□□□ -0.31
SNX1-203ENST00000558040 SELENOTP62341 195 aa13.1□□□□□ -0.31
SNX1-203ENST00000558040 SERF2P84101 59 aa13.1□□□□□ -0.31
SNX1-203ENST00000558040 CYP2G1PQ6ZSU1 146 aa13.1□□□□□ -0.31
SNX1-203ENST00000558040 OR2G3Q8NGZ4 309 aa13.1□□□□□ -0.31
SNX1-203ENST00000558040 TMED6Q8WW62 240 aa13.1□□□□□ -0.31
SNX1-203ENST00000558040 CCDC140Q96MF4 163 aa13.1□□□□□ -0.31
SNX1-203ENST00000558040 SH3BGRL3Q9H299 93 aa13.1□□□□□ -0.31
SNX1-203ENST00000558040 IGKV1D-37A0A075B6S9 117 aa13.09□□□□□ -0.31
SNX1-203ENST00000558040 OR2T8A6NH00 312 aa13.09□□□□□ -0.31
SNX1-203ENST00000558040 NUPL2O15504 423 aaKnown RBP13.09□□□□□ -0.31
SNX1-203ENST00000558040 RPLP1P05386 114 aaKnown RBP13.09□□□□□ -0.31
SNX1-203ENST00000558040 GPR183P32249 361 aa13.09□□□□□ -0.31
SNX1-203ENST00000558040 RPL29P47914 159 aaKnown RBP13.09□□□□□ -0.31
SNX1-203ENST00000558040 SRSF2Q01130 221 aaKnown RBP13.09□□□□□ -0.31
SNX1-203ENST00000558040 SPSB3Q6PJ21 355 aa13.09□□□□□ -0.31
SNX1-203ENST00000558040 ALKAL2Q6UX46 152 aa13.09□□□□□ -0.31
SNX1-203ENST00000558040 LCNL1Q6ZST4 164 aa13.09□□□□□ -0.31
SNX1-203ENST00000558040 MYOZ3Q8TDC0 251 aa13.09□□□□□ -0.31
SNX1-203ENST00000558040 UBE2E2Q96LR5 201 aa13.09□□□□□ -0.31
SNX1-203ENST00000558040 SLC45A2Q9UMX9 530 aa13.09□□□□□ -0.31
SNX1-203ENST00000558040 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.08□□□□□ -0.32
SNX1-203ENST00000558040 F8W735 103 aaPredicted RBP13.08□□□□□ -0.32
SNX1-203ENST00000558040 TSPAN15O95858 294 aa13.08□□□□□ -0.32
SNX1-203ENST00000558040 CFDP00746 253 aaPredicted RBP13.08□□□□□ -0.32
SNX1-203ENST00000558040 CLEC3BP05452 202 aa13.08□□□□□ -0.32
SNX1-203ENST00000558040 ZNF343Q6P1L6 599 aa13.08□□□□□ -0.32
SNX1-203ENST00000558040 CLEC19AQ6UXS0 136 aa13.08□□□□□ -0.32
SNX1-203ENST00000558040 ZNF491Q8N8L2 437 aa13.08□□□□□ -0.32
SNX1-203ENST00000558040 ZNF680Q8NEM1 530 aa13.08□□□□□ -0.32
SNX1-203ENST00000558040 WIPF2Q8TF74 440 aaPredicted RBP13.08□□□□□ -0.32
SNX1-203ENST00000558040 UBQLN2Q9UHD9 624 aa13.08□□□□□ -0.32
SNX1-203ENST00000558040 PXMP4Q9Y6I8 212 aa13.08□□□□□ -0.32
SNX1-203ENST00000558040 UMAD1C9J7I0 102 aa13.07□□□□□ -0.32
SNX1-203ENST00000558040 HAX1O00165 279 aa13.07□□□□□ -0.32
SNX1-203ENST00000558040 TGOLN2O43493 480 aa13.07□□□□□ -0.32
SNX1-203ENST00000558040 IGKV1-17P01599 117 aa13.07□□□□□ -0.32
SNX1-203ENST00000558040 IGHV3-11P01762 117 aa13.07□□□□□ -0.32
SNX1-203ENST00000558040 MBP02144 154 aa13.07□□□□□ -0.32
SNX1-203ENST00000558040 YPEL3P61236 119 aaPredicted RBP13.07□□□□□ -0.32
SNX1-203ENST00000558040 B2MP61769 119 aa13.07□□□□□ -0.32
SNX1-203ENST00000558040 ZNF616Q08AN1 781 aa13.07□□□□□ -0.32
SNX1-203ENST00000558040 TIGITQ495A1 244 aa13.07□□□□□ -0.32
SNX1-203ENST00000558040 FFAR4Q5NUL3 377 aa13.07□□□□□ -0.32
SNX1-203ENST00000558040 AKR1C8PQ5T2L2 129 aa13.07□□□□□ -0.32
SNX1-203ENST00000558040 MIC13Q5XKP0 118 aa13.07□□□□□ -0.32
SNX1-203ENST00000558040 ZNF767PQ75MW2 155 aa13.07□□□□□ -0.32
SNX1-203ENST00000558040 STPG3Q8N7X2 389 aa13.07□□□□□ -0.32
SNX1-203ENST00000558040 BPIFCQ8NFQ6 507 aa13.07□□□□□ -0.32
SNX1-203ENST00000558040 TOMM40O96008 361 aa13.06□□□□□ -0.32
SNX1-203ENST00000558040 CTSGP08311 255 aa13.06□□□□□ -0.32
SNX1-203ENST00000558040 RD3LP0DJH9 198 aa13.06□□□□□ -0.32
SNX1-203ENST00000558040 ARL3P36405 182 aa13.06□□□□□ -0.32
SNX1-203ENST00000558040 RAB5CP51148 216 aa13.06□□□□□ -0.32
SNX1-203ENST00000558040 ELLP55199 621 aaPredicted RBP13.06□□□□□ -0.32
SNX1-203ENST00000558040 PROK1P58294 105 aa13.06□□□□□ -0.32
SNX1-203ENST00000558040 PRR20EP86478 221 aa13.06□□□□□ -0.32
SNX1-203ENST00000558040 PRR20CP86479 221 aa13.06□□□□□ -0.32
SNX1-203ENST00000558040 PRR20DP86480 221 aa13.06□□□□□ -0.32
SNX1-203ENST00000558040 PRR20BP86481 221 aa13.06□□□□□ -0.32
SNX1-203ENST00000558040 PRR20AP86496 221 aa13.06□□□□□ -0.32
SNX1-203ENST00000558040 IFITM2Q01629 132 aa13.06□□□□□ -0.32
SNX1-203ENST00000558040 ZNF90Q03938 601 aa13.06□□□□□ -0.32
SNX1-203ENST00000558040 RELQ04864 619 aaPredicted RBP13.06□□□□□ -0.32
SNX1-203ENST00000558040 FOXL1Q12952 345 aa13.06□□□□□ -0.32
SNX1-203ENST00000558040 KIAA0141Q14154 515 aaPredicted RBP13.06□□□□□ -0.32
SNX1-203ENST00000558040 ACOT6Q3I5F7 207 aaPredicted RBP13.06□□□□□ -0.32
SNX1-203ENST00000558040 KHDC1LQ5JSQ8 128 aa13.06□□□□□ -0.32
SNX1-203ENST00000558040 TMEM182Q6ZP80 229 aaPredicted RBP13.06□□□□□ -0.32
SNX1-203ENST00000558040 Q6ZRG5 221 aa13.06□□□□□ -0.32
SNX1-203ENST00000558040 WFDC12Q8WWY7 111 aa13.06□□□□□ -0.32
SNX1-203ENST00000558040 GNB4Q9HAV0 340 aa13.06□□□□□ -0.32
SNX1-203ENST00000558040 SLC39A9Q9NUM3 307 aa13.06□□□□□ -0.32
SNX1-203ENST00000558040 LGALS1P09382 135 aaKnown RBP13.05□□□□□ -0.32
SNX1-203ENST00000558040 LINC00869P0C866 280 aa13.05□□□□□ -0.32
SNX1-203ENST00000558040 CDX1P47902 265 aaPredicted RBP13.05□□□□□ -0.32
SNX1-203ENST00000558040 PXDC1Q5TGL8 231 aa13.05□□□□□ -0.32
SNX1-203ENST00000558040 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.05□□□□□ -0.32
SNX1-203ENST00000558040 Q8WTZ3 238 aa13.05□□□□□ -0.32
SNX1-203ENST00000558040 PEF1Q9UBV8 284 aaKnown RBP13.05□□□□□ -0.32
SNX1-203ENST00000558040 RFNGQ9Y644 331 aa13.05□□□□□ -0.32
SNX1-203ENST00000558040 PSG1P11464 419 aa13.04□□□□□ -0.32
SNX1-203ENST00000558040 SULT1A2P50226 295 aa13.04□□□□□ -0.32
SNX1-203ENST00000558040 TMEM41BQ5BJD5 291 aa13.04□□□□□ -0.32
SNX1-203ENST00000558040 DPPA3Q6W0C5 159 aa13.04□□□□□ -0.32
SNX1-203ENST00000558040 ZNF600Q6ZNG1 722 aa13.04□□□□□ -0.32
SNX1-203ENST00000558040 OR51G1Q8NGK1 321 aa13.04□□□□□ -0.32
SNX1-203ENST00000558040 LRRC20Q8TCA0 184 aa13.04□□□□□ -0.32
SNX1-203ENST00000558040 RNF141Q8WVD5 230 aa13.04□□□□□ -0.32
SNX1-203ENST00000558040 CHRDL1Q9BU40 450 aa13.04□□□□□ -0.32
SNX1-203ENST00000558040 ANKRD34BA5PLL1 514 aa13.03□□□□□ -0.32
SNX1-203ENST00000558040 PPP5D1E7EU14 171 aa13.03□□□□□ -0.32
SNX1-203ENST00000558040 RGS13O14921 159 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms