RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 DHRSXQ8N5I4 330 aa4.32□□□□□ -1.72
VPS33B-207ENST00000557470 TTC9CQ8N5M4 171 aa4.32□□□□□ -1.72
VPS33B-207ENST00000557470 GDPD1Q8N9F7 314 aa4.32□□□□□ -1.72
VPS33B-207ENST00000557470 TEX45Q8NA69 505 aa4.32□□□□□ -1.72
VPS33B-207ENST00000557470 ZNF485Q8NCK3 441 aa4.32□□□□□ -1.72
VPS33B-207ENST00000557470 STOML3Q8TAV4 291 aa4.32□□□□□ -1.72
VPS33B-207ENST00000557470 CYGBQ8WWM9 190 aa4.32□□□□□ -1.72
VPS33B-207ENST00000557470 ACOT12Q8WYK0 555 aa4.32□□□□□ -1.72
VPS33B-207ENST00000557470 NARS2Q96I59 477 aaKnown RBP4.32□□□□□ -1.72
VPS33B-207ENST00000557470 TM2D1Q9BX74 207 aa4.32□□□□□ -1.72
VPS33B-207ENST00000557470 OR2D2Q9H210 308 aa4.32□□□□□ -1.72
VPS33B-207ENST00000557470 MIXL1Q9H2W2 232 aa4.32□□□□□ -1.72
VPS33B-207ENST00000557470 ZNF430Q9H8G1 570 aaPredicted RBP4.32□□□□□ -1.72
VPS33B-207ENST00000557470 PLEKHJ1Q9NW61 149 aa4.32□□□□□ -1.72
VPS33B-207ENST00000557470 SCP2D1Q9UJQ7 156 aa4.32□□□□□ -1.72
VPS33B-207ENST00000557470 EXOSC1Q9Y3B2 195 aaKnown RBP4.32□□□□□ -1.72
VPS33B-207ENST00000557470 CSDC2Q9Y534 153 aaKnown RBP4.32□□□□□ -1.72
VPS33B-207ENST00000557470 S4R3C0 116 aa4.32□□□□□ -1.72
VPS33B-207ENST00000557470 PKHD1P08F94 4074 aa4.31□□□□□ -1.72
VPS33B-207ENST00000557470 C9orf170A2RU37 121 aa4.31□□□□□ -1.72
VPS33B-207ENST00000557470 SOCS1O15524 211 aa4.31□□□□□ -1.72
VPS33B-207ENST00000557470 MRPS14O60783 128 aaKnown RBP4.31□□□□□ -1.72
VPS33B-207ENST00000557470 MED6O75586 246 aa4.31□□□□□ -1.72
VPS33B-207ENST00000557470 CD3GP09693 182 aa4.31□□□□□ -1.72
VPS33B-207ENST00000557470 NANOS2P60321 138 aaKnown RBP4.31□□□□□ -1.72
VPS33B-207ENST00000557470 RAB5BP61020 215 aa4.31□□□□□ -1.72
VPS33B-207ENST00000557470 QRFPP83859 136 aa4.31□□□□□ -1.72
VPS33B-207ENST00000557470 ZNF415Q09FC8 603 aa4.31□□□□□ -1.72
VPS33B-207ENST00000557470 INSL4Q14641 139 aa4.31□□□□□ -1.72
VPS33B-207ENST00000557470 RTL8BQ17RB0 113 aa4.31□□□□□ -1.72
VPS33B-207ENST00000557470 VMA21Q3ZAQ7 101 aa4.31□□□□□ -1.72
VPS33B-207ENST00000557470 RNASE10Q5GAN6 216 aaKnown RBP4.31□□□□□ -1.72
VPS33B-207ENST00000557470 OR2B11Q5JQS5 317 aa4.31□□□□□ -1.72
VPS33B-207ENST00000557470 ZNF773Q6PK81 442 aa4.31□□□□□ -1.72
VPS33B-207ENST00000557470 TEX261Q6UWH6 196 aa4.31□□□□□ -1.72
VPS33B-207ENST00000557470 CLEC19AQ6UXS0 136 aa4.31□□□□□ -1.72
VPS33B-207ENST00000557470 UNQ9165/PRO28630Q6UXU0 137 aa4.31□□□□□ -1.72
VPS33B-207ENST00000557470 CEACAM19Q7Z692 300 aa4.31□□□□□ -1.72
VPS33B-207ENST00000557470 ZNF555Q8NEP9 628 aa4.31□□□□□ -1.72
VPS33B-207ENST00000557470 OR1L6Q8NGR2 347 aa4.31□□□□□ -1.72
VPS33B-207ENST00000557470 OR10J5Q8NHC4 309 aa4.31□□□□□ -1.72
VPS33B-207ENST00000557470 MARCH1Q8TCQ1 289 aa4.31□□□□□ -1.72
VPS33B-207ENST00000557470 TCTEX1D2Q8WW35 142 aa4.31□□□□□ -1.72
VPS33B-207ENST00000557470 C8orf49Q96NF6 230 aa4.31□□□□□ -1.72
VPS33B-207ENST00000557470 SPIN2AQ99865 258 aa4.31□□□□□ -1.72
VPS33B-207ENST00000557470 SPIN2BQ9BPZ2 258 aa4.31□□□□□ -1.72
VPS33B-207ENST00000557470 SSR3Q9UNL2 185 aa4.31□□□□□ -1.72
VPS33B-207ENST00000557470 ETV7Q9Y603 341 aa4.31□□□□□ -1.72
VPS33B-207ENST00000557470 PUS1Q9Y606 427 aaKnown RBP eCLIP4.31□□□□□ -1.72
VPS33B-207ENST00000557470 U3KQ87 197 aa4.31□□□□□ -1.72
VPS33B-207ENST00000557470 A0A0A6YYH2 397 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 KIR2DL5BA0A0G2JN68 375 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 KIR2DL5BA0A0G2JPC4 375 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 A0A1B0GVY2 172 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 A0A1B0GW64 132 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 A6NJ64 397 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 LINC00473A8K010 186 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 FOXI3A8MTJ6 420 aaPredicted RBP4.3□□□□□ -1.72
VPS33B-207ENST00000557470 TMEM14DPA8MWL7 114 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 TRDCB7Z8K6 153 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 TSTD3H0UI37 97 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 RS1O15537 224 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 S1PR2O95136 353 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 SAA1P0DJI8 122 aaPredicted RBP4.3□□□□□ -1.72
VPS33B-207ENST00000557470 C8orf88P0DMB2 117 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 RPL35AP18077 110 aaKnown RBP4.3□□□□□ -1.72
VPS33B-207ENST00000557470 CELP19835 753 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 DUTP33316 252 aaKnown RBP4.3□□□□□ -1.72
VPS33B-207ENST00000557470 ETV6P41212 452 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 MAP2K4P45985 399 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 TAS2R43P59537 309 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 GABARAPL2P60520 117 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 RAB2AP61019 212 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 NUTF2P61970 127 aaKnown RBP4.3□□□□□ -1.72
VPS33B-207ENST00000557470 ODF3L2Q3SX64 289 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 FAM106AQ4KMX7 169 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 RBM48Q5RL73 367 aaKnown RBP4.3□□□□□ -1.72
VPS33B-207ENST00000557470 C1orf100Q5SVJ3 147 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 GLT8D1Q68CQ7 371 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 H2BFWTQ7Z2G1 175 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 MRPL52Q86TS9 123 aaKnown RBP4.3□□□□□ -1.72
VPS33B-207ENST00000557470 LRRTM1Q86UE6 522 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 KIR2DL5AQ8N109 375 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 OR2D3Q8NGH3 330 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 OR4D5Q8NGN0 318 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 KIR2DL5BQ8NHK3 375 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 TMEM203Q969S6 136 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 MRGPRFQ96AM1 343 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 LPAR5Q9H1C0 372 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 TMPRSS5Q9H3S3 457 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 FLVCR2Q9UPI3 526 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 ZNF257Q9Y2Q1 563 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 GOLT1BQ9Y3E0 138 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 MUC4Q99102 2169 aa4.3□□□□□ -1.72
VPS33B-207ENST00000557470 IGHV3-35A0A0C4DH35 117 aa4.29□□□□□ -1.72
VPS33B-207ENST00000557470 IRGMA1A4Y4 181 aa4.29□□□□□ -1.72
VPS33B-207ENST00000557470 C15orf62A8K5M9 175 aa4.29□□□□□ -1.72
VPS33B-207ENST00000557470 E7EUB6 86 aa4.29□□□□□ -1.72
VPS33B-207ENST00000557470 FABP7O15540 132 aa4.29□□□□□ -1.72
VPS33B-207ENST00000557470 CREBL2O60519 120 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms