RNA–Protein interactions for RNA: ENST00000557424.1

HMGB1P14-201, Transcript of high mobility group box 1 pseudogene 14, humanhuman

BASIC

Gene HMGB1P14, Length 591 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P14-201ENST00000557424 TMEM126AQ9H061 195 aa1.79□□□□□ -2.12
HMGB1P14-201ENST00000557424 RNF122Q9H9V4 155 aa1.79□□□□□ -2.12
HMGB1P14-201ENST00000557424 XAGE1AQ9HD64 81 aa1.79□□□□□ -2.12
HMGB1P14-201ENST00000557424 MRPL16Q9NX20 251 aaKnown RBP1.79□□□□□ -2.12
HMGB1P14-201ENST00000557424 CD109Q6YHK3 1445 aa1.79□□□□□ -2.12
HMGB1P14-201ENST00000557424 COL16A1Q07092 1604 aaPredicted RBP1.79□□□□□ -2.12
HMGB1P14-201ENST00000557424 SHANK3Q9BYB0 1731 aa1.79□□□□□ -2.12
HMGB1P14-201ENST00000557424 MYH2Q9UKX2 1941 aa1.79□□□□□ -2.12
HMGB1P14-201ENST00000557424 DICER1Q9UPY3 1922 aaKnown RBP1.79□□□□□ -2.12
HMGB1P14-201ENST00000557424 PLXNB1O43157 2135 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 ZNF106Q9H2Y7 1883 aaKnown RBP1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 CCDC171Q6TFL3 1326 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 A0A0J9YW62 118 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 EFCAB10A6NFE3 127 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 CCDC160A6NGH7 325 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 H3BPC8 53 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 KRTAP5-8O75690 187 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 LYZL6O75951 148 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 GADD45GO95257 159 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 CDS2O95674 445 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 UBBP0CG47 229 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 HRES1P13985 223 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 SRP14P37108 136 aaKnown RBP1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 DYNLT3P51808 116 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 HIST1H4AP62805 103 aaKnown RBP1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 RELAQ04206 551 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 AKR1C1Q04828 323 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 EIF3IQ13347 325 aaKnown RBP1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 TAF9Q16594 264 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 LCE3EQ5T5B0 92 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 FAM27BQ5VT28 67 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 SPINT4Q6UDR6 99 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 LYPD1Q8N2G4 141 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 TSTD1Q8NFU3 115 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 OR4E2Q8NGC2 313 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 OR5A1Q8NGJ0 315 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 PPTC7Q8NI37 304 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 HIST1H2BLQ99880 126 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 GINS4Q9BRT9 223 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 SMIM3Q9BZL3 60 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 DUSP21Q9H596 190 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 TPT1P8Q9HAU6 139 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 NIT2Q9NQR4 276 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 COPZ2Q9P299 210 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 HSPE1-MOB4S4R3N1 261 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 U3KQ87 197 aa1.78□□□□□ -2.12
HMGB1P14-201ENST00000557424 MYO10Q9HD67 2058 aa1.78□□□□□ -2.13
HMGB1P14-201ENST00000557424 CACNA1SQ13698 1873 aa1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 SIPA1L1O43166 1804 aa1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 MAST2Q6P0Q8 1798 aa1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 IGLV3-9A0A075B6K5 115 aa1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 TRAV7A0A075B6U4 112 aa1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 IRGMA1A4Y4 181 aa1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 ARRDC5A6NEK1 342 aa1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 C3orf84H3BNL1 204 aa1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 LY6LH3BQJ8 138 aa1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 K7EP13 123 aa1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 GNRH2O43555 120 aa1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 FAM107AO95990 144 aa1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 PRB2P02812 416 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 CLPSP04118 112 aa1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 MPC1LP0DKB6 136 aa1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 FABP2P12104 132 aa1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 ZNF14P17017 642 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 LGALS3P17931 250 aaKnown RBP1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 CD24P25063 80 aa1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 RAB5CP51148 216 aa1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 DNAJB13P59910 316 aa1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 YPEL3P61236 119 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 UBE2BP63146 152 aa1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 PSG9Q00887 426 aa1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 PLCXD2Q0VAA5 305 aa1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 HMGN2P46Q86SG4 172 aa1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 TRAPPC6BQ86SZ2 158 aa1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 PDZD9Q8IXQ8 264 aa1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 OR8I2Q8N0Y5 310 aa1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 AQP3Q92482 292 aa1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 ISOC1Q96CN7 298 aa1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 SCGB3A1Q96QR1 104 aa1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 LAMTOR2Q9Y2Q5 125 aa1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 FAM215AQ9Y5M1 114 aa1.77□□□□□ -2.13
HMGB1P14-201ENST00000557424 CEP164Q9UPV0 1460 aa1.76□□□□□ -2.13
HMGB1P14-201ENST00000557424 OVOS2A0A0G2JMS6 1433 aa1.76□□□□□ -2.13
HMGB1P14-201ENST00000557424 TRGV5A0A0B4J1U4 118 aa1.76□□□□□ -2.13
HMGB1P14-201ENST00000557424 TRAV40A0A0B4J280 105 aa1.76□□□□□ -2.13
HMGB1P14-201ENST00000557424 A0A0J9YX75 114 aa1.76□□□□□ -2.13
HMGB1P14-201ENST00000557424 LRCOL1A6NCL2 159 aa1.76□□□□□ -2.13
HMGB1P14-201ENST00000557424 TP53I11O14683 189 aa1.76□□□□□ -2.13
HMGB1P14-201ENST00000557424 CREBL2O60519 120 aaPredicted RBP1.76□□□□□ -2.13
HMGB1P14-201ENST00000557424 OR2H2O95918 312 aa1.76□□□□□ -2.13
HMGB1P14-201ENST00000557424 KDELR1P24390 212 aa1.76□□□□□ -2.13
HMGB1P14-201ENST00000557424 SDC2P34741 201 aa1.76□□□□□ -2.13
HMGB1P14-201ENST00000557424 VMA21Q3ZAQ7 101 aa1.76□□□□□ -2.13
HMGB1P14-201ENST00000557424 BCL2L15Q5TBC7 163 aa1.76□□□□□ -2.13
HMGB1P14-201ENST00000557424 TMEM244Q5VVB8 128 aa1.76□□□□□ -2.13
HMGB1P14-201ENST00000557424 AMMECR1LQ6DCA0 310 aa1.76□□□□□ -2.13
HMGB1P14-201ENST00000557424 RPL13AP3Q6NVV1 102 aa1.76□□□□□ -2.13
HMGB1P14-201ENST00000557424 CROCCP2Q86T23 111 aa1.76□□□□□ -2.13
HMGB1P14-201ENST00000557424 RNASE11Q8TAA1 199 aaKnown RBP1.76□□□□□ -2.13
HMGB1P14-201ENST00000557424 CANT1Q8WVQ1 401 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms